version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2223 50.14 0 2498017..2498361 + 114 30063799 yfeC S2603 - hypothetical protein 2224 47.58 0 2498384..2498755 + 123 30063800 yfeD S2604 - hypothetical protein 2225 52.54 0 2498807..2500222 - 471 30063801 gltX S2605 - glutamyl-tRNA synthetase 2226 42.98 -2 2501032..2501373 + 113 30063802 flxA S2609 - hypothetical protein 2227 53.72 0 2501364..2502290 - 308 30063803 yfeR S2610 - putative LYSR-type transcriptional regulator 2228 51.65 0 2502380..2503378 + 332 30063804 yfeH S2611 - putative cytochrome oxidase 2229 54.27 0 2503595..2505610 - 671 30063805 ligA S2612 - NAD-dependent DNA ligase LigA 2230 55.39 0 2505681..2506664 - 327 30063806 zipA S2613 - cell division protein ZipA 2231 49.87 0 2506897..2507658 + 253 30063807 cysZ S2614 - putative sulfate transport protein CysZ 2232 50.10 0 2507843..2508814 + 323 30063808 cysK S2615 - cysteine synthase A 2233 50.78 0 2509198..2509455 + 85 30063809 ptsH S2616 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2234 49.71 0 2509500..2511227 + 575 30063810 ptsI S2617 - phosphoenolpyruvate-protein phosphotransferase 2235 46.86 -1 2511268..2511777 + 169 30063811 crr S2618 - glucose-specific PTS system component 2236 51.88 0 2511819..2512670 - 283 30063812 pdxK S2619 - pyridoxal kinase 2237 48.53 0 2512775..2513149 + 124 30063813 yfeK S2620 - hypothetical protein 2238 55.92 +1 2514109..2515020 - 303 30063814 cysM S2622 - cysteine synthase B 2239 58.47 +1 2515154..2516251 - 365 30063815 cysA S2623 - sulfate/thiosulfate transporter subunit 2240 57.33 +1 2516241..2516690 - 149 30063816 cysW S2624 - sulfate transport system permease W protein 2241 54.92 0 2517116..2517949 - 277 30063817 cysU S2625 - sulfate/thiosulfate transporter subunit 2242 53.10 0 2517949..2518965 - 338 30063818 cysP S2626 - thiosulfate transporter subunit 2243 54.80 0 2519269..2520060 - 263 30063819 ucpA S2627 - short chain dehydrogenase 2244 52.43 0 2520247..2521047 - 266 30063820 yfeT S2628 - hypothetical protein 2245 53.40 0 2521211..2522107 + 298 30063821 murQ S2629 - N-acetylmuramic acid-6-phosphate etherase 2246 56.56 +1 2522111..2523535 + 474 30063822 murP S2630 - N-acetylmuramic acid phosphotransfer permease 2247 55.89 +1 2523715..2524614 - 299 30063823 - S2632 - hypothetical protein 2248 50.35 0 2524710..2525285 - 191 30063824 - S2633 - hypothetical protein 2249 52.89 0 2525346..2525795 - 149 30063825 - S2634 - hypothetical protein 2250 51.88 0 2525782..2526207 - 141 30063826 - S2635 - putative acetyltransferase 2251 50.11 0 2526421..2527290 + 289 30063827 amiA S2636 - N-acetylmuramoyl-l-alanine amidase I 2252 55.97 +1 2528200..2528760 - 186 30063828 yfeG S2638 - putative ARAC-type regulatory protein 2253 57.68 +1 2529298..2529798 - 166 30063829 - S2639 - hypothetical protein 2254 56.36 +1 2529811..2530470 - 219 30063830 - S2641 - hypothetical protein 2255 51.24 0 2531823..2532224 + 133 30063831 - S2642 - hypothetical protein 2256 41.92 -2 2533162..2533557 + 131 30063832 - S2643 - hypothetical protein 2257 45.45 -1 2533575..2533838 + 87 30063833 - S2644 - hypothetical protein 2258 48.80 0 2533861..2534403 + 180 30063834 - S2645 - hypothetical protein 2259 47.58 0 2534500..2534829 + 109 30063835 - S2646 - hypothetical protein 2260 47.34 -1 2534868..2535074 + 68 30063836 - S2647 - hypothetical protein 2261 49.30 0 2535659..2535871 + 70 30063837 - S2648 - hypothetical protein 2262 39.90 -2 2536123..2537583 + 486 30063838 - S2649 - putative amino acid antiporter 2263 51.77 0 2538545..2538940 - 131 30063839 - S2650 - iso-IS1 ORF2 2264 48.72 0 2538967..2539239 - 90 30063840 - S2651 - IS1N orfA 2265 49.79 0 2541106..2541585 - 159 30063841 - S2654 - hypothetical protein 2266 49.02 0 2541598..2542005 - 135 30063842 - S2655 - hypothetical protein 2267 54.30 0 2542226..2544505 - 759 30063843 - S2656 - malic enzyme 2268 49.84 0 2544794..2545744 + 316 30063844 talA S2657 - transaldolase A 2269 54.49 0 2545764..2547767 + 667 30063845 tktB S2658 - transketolase 2270 54.12 0 2547870..2548913 - 347 30063846 - S2659 - hypothetical protein 2271 48.09 0 2549039..2549614 - 191 30063847 yffH S2660 - hypothetical protein 2272 55.51 0 2549682..2551661 - 659 30063848 yffG S2661 - putative oxidoreductase Fe-S binding subunit 2273 54.24 0 2553786..2556899 + 1037 30063849 acrD S2663 - aminoglycoside/multidrug efflux system 2274 47.06 -1 2557438..2557794 + 118 30063850 yffB S2664 - hypothetical protein 2275 53.10 0 2557798..2558925 + 375 30063851 dapE S2665 - succinyl-diaminopimelate desuccinylase 2276 53.65 0 2559263..2559961 - 232 30063852 ypfH S2666 - esterase YpfH 2277 55.16 0 2560035..2562050 - 671 30063853 ypfI S2667 - hypothetical protein 2278 53.59 0 2562065..2562928 - 287 30063854 - S2668 - hypothetical protein 2279 52.10 0 2563096..2563809 - 237 30063855 purC S2669 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2280 55.36 0 2564022..2565056 - 344 30063856 nlpB S2670 - lipoprotein 2281 51.65 0 2565073..2565951 - 292 30063857 dapA S2671 - dihydrodipicolinate synthase 2282 49.26 0 2566669..2567139 + 156 30063858 bcp S2673 - thioredoxin-dependent thiol peroxidase 2283 56.80 +1 2567392..2568009 + 205 30063859 hyfA S2674 - hydrogenase 4 Fe-S subunit 2284 53.38 0 2570037..2570984 + 315 30063860 hyfC S2676 - hydrogenase 4 membrane subunit 2285 55.56 0 2571001..2572440 + 479 30063861 hyfD S2677 - hydrogenase 4 subunit D 2286 53.30 0 2572452..2573102 + 216 30063862 hyfE S2678 - hydrogenase 4 membrane subunit 2287 54.19 0 2573107..2574693 + 528 30063863 hyfF S2679 - hydrogenase 4 subunit F 2288 55.31 0 2576407..2576952 + 181 30063864 hyfH S2681 - hydrogenase 4 subunit H 2289 56.39 +1 2576949..2577707 + 252 30063865 hyfI S2682 - hydrogenase 4 Fe-S subunit 2290 51.99 0 2577637..2578113 + 158 30063866 - S2683 - putative protein processing element 2291 54.05 0 2581143..2582204 - 353 30063867 perM S2686 - putative permease 2292 54.17 0 2582417..2583880 + 487 30063868 - S2687 - hypothetical protein 2293 52.22 0 2583901..2584260 + 119 30063869 - S2688 - putative oxidoreductase 2294 53.15 0 2584393..2585139 - 248 30063870 - S2689 - DNA replication initiation factor 2295 51.86 0 2585189..2586478 - 429 30063871 uraA S2690 - uracil transporter 2296 53.11 0 2586564..2587190 - 208 30063872 upp S2691 - uracil phosphoribosyltransferase 2297 53.66 0 2587499..2588551 + 350 30063873 purM S2692 - phosphoribosylaminoimidazole synthetase 2298 53.52 0 2588551..2589189 + 212 30063874 purN S2693 - phosphoribosylglycinamide formyltransferase 2299 48.67 0 2589361..2591427 + 688 30063875 ppk S2694 - polyphosphate kinase 2300 51.04 0 2591432..2592973 + 513 30063876 ppx S2695 - exopolyphosphatase 2301 46.20 -1 2594187..2594489 + 100 30063877 - S2697 - IS600 orfA 2302 52.24 0 2594630..2595343 + 237 30063878 - S2698 - IS600 orfB 2303 48.96 0 2596873..2597064 + 63 30063879 - S2700 - hypothetical protein 2304 47.21 -1 2597375..2597893 + 172 30063880 - S2701 - putative outer membrane lipoprotein 2305 49.26 0 2597909..2598448 + 179 30063881 - S2702 - hypothetical protein 2306 60.78 +2 2598850..2599665 + 271 30063882 - S2703 - dihydropteroate synthase 2307 58.09 +1 2599752..2600054 + 100 30063883 - S2704 - phosphoglucosamine mutase 2308 60.78 +2 2600230..2601723 - 497 30063884 - S2705 - putative transposase 2309 60.89 +2 2601934..2602158 - 74 30063885 - S2706 - hypothetical protein 2310 67.48 +2 2602155..2602892 - 245 30063886 parA S2707 - resolvase 2311 62.16 +2 2603040..2603372 + 110 30063887 - S2708 - putative transcriptional regulator 2312 62.11 +2 2603369..2604136 + 255 30063888 - S2709 - putative arsenical resistance protein 2313 60.55 +2 2604133..2604639 + 168 30063889 - S2710 - arsenate reductase 2314 62.83 +2 2604636..2605703 + 355 30063890 - S2711 - putative sodium bile acid symporter family protein 2315 60.12 +2 2606599..2607087 - 162 30063891 - S2715 - hypothetical protein 2316 53.04 0 2607237..2608043 - 268 30063892 trbL S2716 - putative mating pair formation protein 2317 59.87 +2 2608282..2609061 - 259 30063893 trbJ S2718 - putative mating pair formation protein 2318 52.38 0 2609202..2609390 - 62 30063894 - S2719 - putative stabilization protein 2319 59.07 +1 2610423..2611304 - 293 30063895 repC S2720 - putative replication protein C 2320 55.68 +1 2611291..2612118 - 275 30063896 - S2721 - putative DNA helicase 2321 50.00 0 2612123..2612344 - 73 30063897 - S2722 - hypothetical protein 2322 58.02 +1 2612492..2613694 - 400 30063898 - S2723 - putative integrase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0