version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2136 56.58 +1 2387788..2389125 - 445 30063710 nuoF S2495 - NADH dehydrogenase I subunit F 2137 55.29 0 2389122..2389622 - 166 30063711 nuoE S2496 - NADH dehydrogenase subunit E 2138 55.80 +1 2389625..2391427 - 600 30063712 nuoC S2497 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2139 51.89 0 2391521..2392183 - 220 30063713 nuoB S2498 - NADH dehydrogenase subunit B 2140 53.38 0 2392199..2392642 - 147 30063714 nuoA S2499 - NADH dehydrogenase subunit A 2141 49.84 0 2393273..2394211 - 312 30063715 lrhA S2500 - LysR family NADH dehydrogenase transcriptional regulator 2142 50.41 0 2395130..2396347 + 405 30063716 - S2501 - aminotransferase AlaT 2143 49.67 0 2396431..2397030 + 199 30063717 - S2502 - hypothetical protein 2144 52.43 0 2397089..2398921 - 610 30063718 yfbS S2503 - putative transport protein 2145 56.07 +1 2399008..2399658 - 216 30063719 yfbT S2504 - putative phosphatase 2146 47.27 -1 2399669..2400163 - 164 30063720 - S2505 - hypothetical protein 2147 50.00 0 2400246..2400701 - 151 30063721 - S2506 - hypothetical protein 2148 52.37 0 2401039..2402241 + 400 30063722 ackA S2507 - acetate kinase 2149 55.48 0 2402316..2404460 + 714 30063723 pta S2508 - phosphate acetyltransferase 2150 51.61 0 2404650..2406170 + 506 161486459 yfcC S2509 - hypothetical protein 2151 53.59 0 2406203..2406745 - 180 30063725 - S2510 - putative regulator 2152 51.27 0 2406803..2407354 - 183 30063726 yfcE S2511 - phosphodiesterase 2153 51.94 0 2407410..2408054 - 214 30063727 yfcF S2512 - hypothetical protein 2154 50.93 0 2408190..2408837 + 215 30063728 yfcG S2513 - putative S-transferase 2155 44.90 -1 2408894..2409256 + 120 30063729 folX S2514 - D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2156 55.15 0 2409277..2410170 + 297 30063730 - S2515 - putative sugar nucleotide epimerase 2157 45.01 -1 2410218..2411108 - 296 30063731 yfcI S2516 - hypothetical protein 2158 51.68 0 2411305..2412078 - 257 30063732 hisP S2517 - histidine/lysine/arginine/ornithine transporter subunit 2159 50.07 0 2412086..2412802 - 238 30063733 hisM S2518 - histidine transport, membrane protein M 2160 53.42 0 2412799..2413485 - 228 30063734 hisQ S2519 - histidine transport system permease protein 2161 49.55 0 2413575..2414357 - 260 30063735 hisJ S2520 - histidine-binding periplasmic protein of high-affinity histidine transport system 2162 49.81 0 2414578..2415360 - 260 30063736 argT S2521 - lysine-, arginine-, ornithine-binding periplasmic protein 2163 53.16 0 2415626..2416195 - 189 30063737 ubiX S2522 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2164 52.83 0 2416290..2417807 - 505 30063738 purF S2523 - amidophosphoribosyltransferase 2165 49.08 0 2417844..2418332 - 162 30063739 cvpA S2524 - colicin V production protein 2166 57.01 +1 2418591..2419253 - 220 161486458 dedD S2525 - hypothetical protein 2167 55.95 +1 2419243..2420511 - 422 30063741 folC S2526 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2168 55.19 0 2420581..2421495 - 304 30063742 accD S2527 - acetyl-CoA carboxylase subunit beta 2169 48.18 0 2421651..2422310 - 219 30063743 dedA S2528 - hypothetical protein 2170 55.60 0 2422393..2423205 - 270 30063744 truA S2529 - tRNA pseudouridine synthase A 2171 55.42 0 2423205..2424218 - 337 30063745 usg S2530 - putative semialdehyde dehydrogenase 2172 53.65 0 2424284..2425420 - 378 30063746 pdxB S2531 - erythronate-4-phosphate dehydrogenase 2173 52.51 0 2425519..2426514 + 331 30063747 div S2532 - flagella biosynthesis regulator 2174 56.91 +1 2426511..2427689 - 392 30063748 - S2533 - hypothetical protein 2175 56.12 +1 2427944..2429185 - 413 30063749 fabB S2534 - 3-oxoacyl-(acyl carrier protein) synthase I 2176 52.17 0 2429344..2431350 + 668 161486457 mnmC S2535 - 5-methylaminomethyl-2-thiouridine methyltransferase 2177 53.41 0 2431471..2431749 - 92 30063751 - S2536 - hypothetical protein 2178 50.27 0 2431783..2432331 - 182 30063752 - S2537 - putative transporting ATPase 2179 52.59 0 2432331..2433140 - 269 30063753 yfcA S2538 - hypothetical protein 2180 55.15 0 2433140..2433964 - 274 30063754 mepA S2539 - penicillin-insensitive murein endopeptidase 2181 56.63 +1 2433968..2435053 - 361 30063755 aroC S2540 - chorismate synthase 2182 51.18 0 2435088..2436353 - 421 30063756 yfcB S2542 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2183 52.90 0 2436186..2436737 + 183 30063757 - S2541 - hypothetical protein 2184 45.92 -1 2442723..2443286 - 187 30063758 - S2550 - putative fimbrial-like protein 2185 52.78 0 2443555..2444058 - 167 30063759 - S2551 - IS1 orfB 2186 52.90 0 2443977..2444252 - 91 30063760 - S2552 - IS1 orfA 2187 52.88 0 2444747..2445232 - 161 30063761 - S2553 - phosphohistidine phosphatase 2188 52.03 0 2445435..2447579 - 714 30063762 fadJ S2554 - multifunctional fatty acid oxidation complex subunit alpha 2189 55.53 0 2447579..2448889 - 436 30063763 fadI S2555 - 3-ketoacyl-CoA thiolase 2190 51.46 0 2449069..2449377 - 102 30063764 - S2556 - hypothetical protein 2191 49.96 0 2449725..2451065 + 446 30063765 fadL S2557 - long-chain fatty acid outer membrane transporter 2192 34.84 -2 2451431..2452489 + 352 30063766 - S2558 - hypothetical protein 2193 52.38 0 2452671..2453426 - 251 30063767 vacJ S2559 - lipoprotein precursor 2194 48.78 0 2453831..2454652 + 273 30063768 yfdC S2560 - putative transport protein 2195 44.88 -1 2456297..2456599 - 100 30063769 - S2565 - IS911 orfA 2196 56.27 +1 2456580..2457185 - 201 30063770 - S2566 - IS4 orf 2197 51.12 0 2457501..2458934 + 477 30063771 - S2470 - hypothetical protein 2198 51.65 0 2458942..2460000 - 352 30063772 - S2568 - sucrose specific repressor 2199 50.56 0 2460404..2461732 + 442 30063773 dsdA S2570 - D-serine dehydratase 2200 41.78 -2 2461840..2463378 - 512 30063774 emrY S2571 - multidrug resistance protein Y 2201 41.49 -2 2463378..2464541 - 387 30063775 emrK S2572 - multidrug resistance protein K 2202 40.65 -2 2464957..2465571 + 204 30063776 evgA S2573 - DNA-binding transcriptional activator EvgA 2203 40.73 -2 2465576..2469169 + 1197 30063777 evgS S2574 - hybrid sensory histidine kinase in two-component regulatory system with EvgA 2204 44.98 -1 2469225..2470409 - 394 161486456 yfdE S2575 - hypothetical protein 2205 46.49 -1 2471457..2473151 - 564 30063779 - S2577 - putative oxalyl-CoA decarboxylase 2206 47.08 -1 2473205..2474455 - 416 30063780 - S2578 - formyl-coenzyme A transferase 2207 46.15 -1 2474968..2475591 - 207 30063781 - S2579 - hypothetical protein 2208 38.04 -2 2475888..2476163 + 91 30063782 - S2580 - hypothetical protein 2209 48.15 0 2476240..2476482 - 80 30063783 - S2581 - hypothetical protein 2210 51.36 0 2476835..2477755 + 306 161486455 ddg S2582 - lipid A biosynthesis palmitoleoyl acyltransferase 2211 55.13 0 2478246..2479484 - 412 30063785 - S2583 - aminotransferase 2212 47.48 -1 2481362..2482096 + 244 30063786 - S2585 - putative 2-component transcriptional regulator 2213 54.45 0 2482109..2482681 + 190 30063787 - S2586 - putative ARAC-type regulatory protein 2214 55.09 0 2482969..2485464 - 831 30063788 - S2588 - putative PTS system enzyme IIA component, enzyme I 2215 57.42 +1 2485489..2486526 - 345 30063789 - S2589 - exoaminopeptidase 2216 53.53 0 2487624..2488871 - 415 30063790 - S2591 - putative transport protein 2217 50.46 0 2488893..2489219 - 108 30063791 - S2592 - putative PTS system enzyme IIB component 2218 51.45 0 2489438..2490403 - 321 30063792 glk S2593 - glucokinase 2219 53.86 0 2490607..2491863 + 418 30063793 - S2594 - hypothetical protein 2220 52.29 0 2491978..2492304 + 108 30063794 - S2595 - hypothetical protein 2221 53.03 0 2492445..2493683 - 412 30063796 mntH S2597 - manganese transport protein MntH 2222 49.46 0 2494019..2495221 + 400 30063797 nupC S2598 - permease of transport system for 3 nucleosides 2223 50.14 0 2498017..2498361 + 114 30063799 yfeC S2603 - hypothetical protein 2224 47.58 0 2498384..2498755 + 123 30063800 yfeD S2604 - hypothetical protein 2225 52.54 0 2498807..2500222 - 471 30063801 gltX S2605 - glutamyl-tRNA synthetase 2226 42.98 -2 2501032..2501373 + 113 30063802 flxA S2609 - hypothetical protein 2227 53.72 0 2501364..2502290 - 308 30063803 yfeR S2610 - putative LYSR-type transcriptional regulator 2228 51.65 0 2502380..2503378 + 332 30063804 yfeH S2611 - putative cytochrome oxidase 2229 54.27 0 2503595..2505610 - 671 30063805 ligA S2612 - NAD-dependent DNA ligase LigA 2230 55.39 0 2505681..2506664 - 327 30063806 zipA S2613 - cell division protein ZipA 2231 49.87 0 2506897..2507658 + 253 30063807 cysZ S2614 - putative sulfate transport protein CysZ 2232 50.10 0 2507843..2508814 + 323 30063808 cysK S2615 - cysteine synthase A 2233 50.78 0 2509198..2509455 + 85 30063809 ptsH S2616 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2234 49.71 0 2509500..2511227 + 575 30063810 ptsI S2617 - phosphoenolpyruvate-protein phosphotransferase 2235 46.86 -1 2511268..2511777 + 169 30063811 crr S2618 - glucose-specific PTS system component 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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