version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2055 52.18 0 2285597..2286604 - 335 30063629 yejK S2402 - nucleoid-associated protein NdpA 2056 49.56 0 2286786..2287013 + 75 30063630 yejL S2403 - hypothetical protein 2057 52.19 0 2287033..2288793 + 586 30063631 yejM S2404 - putative sulfatase 2058 48.67 0 2289047..2291557 - 836 30063632 yejO S2406 - putative ATP-binding component of a transport system 2059 52.31 0 2291958..2292605 + 215 30063633 narP S2407 - transcriptional regulator NarP 2060 54.51 0 2292816..2293868 - 350 30063634 ccmH S2408 - subunit of heme lyase 2061 54.30 0 2293865..2294422 - 185 30063635 dsbE S2409 - disulfide oxidoreductase 2062 57.00 +1 2294419..2296362 - 647 30063636 ccmF S2410 - cytochrome c-type biogenesis protein 2063 54.37 0 2296359..2296838 - 159 30063637 ccmE S2411 - cytochrome c-type biogenesis protein CcmE 2064 56.67 +1 2296835..2297044 - 69 30063638 ccmD S2412 - heme exporter protein C 2065 55.56 0 2297041..2297778 - 245 30063639 ccmC S2413 - heme exporter protein C 2066 55.66 +1 2297820..2298482 - 220 30063640 ccmB S2414 - heme exporter protein B, cytochrome c-type biogenesis protein 2067 55.61 0 2298479..2299102 - 207 30063641 ccmA S2415 - cytochrome c biogenesis protein CcmA 2068 51.74 0 2299115..2299717 - 200 30063642 napC S2416 - cytochrome c-type protein NapC 2069 55.78 +1 2299727..2300176 - 149 30063643 napB S2417 - diheme cytochrome c550 2070 55.67 +1 2300173..2301036 - 287 30063644 napH S2418 - quinol dehydrogenase membrane component 2071 58.91 +1 2301023..2301718 - 231 30063645 napG S2419 - quinol dehydrogenase periplasmic component 2072 56.01 +1 2301725..2304211 - 828 30063646 napA S2420 - nitrate reductase 2073 54.55 0 2304208..2304471 - 87 30063647 napD S2421 - assembly protein for periplasmic nitrate reductase 2074 54.75 0 2304461..2304955 - 164 30063648 napF S2422 - ferredoxin-type protein 2075 49.69 0 2305363..2305851 + 162 30063649 eco S2423 - ecotin precursor 2076 53.28 0 2307815..2309458 - 547 30063650 yojI S2425 - multidrug transporter membrane component/ATP-binding component 2077 52.23 0 2309534..2310184 - 216 30063651 alkB S2426 - alkylated DNA repair protein 2078 57.09 +1 2310184..2311248 - 354 30063652 ada S2427 - O6-methylguanine-DNA methyltransferase; transcription activator/repressor 2079 53.41 0 2311322..2312377 - 351 30063653 yojL S2428 - thiamine biosynthesis lipoprotein ApbE 2080 50.36 0 2312489..2313610 - 373 30063654 ompC S2429 - outer membrane porin protein C 2081 49.20 0 2314348..2317020 + 890 30063655 yojN S2431 - phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2082 47.77 0 2317037..2317687 + 216 30063656 rcsB S2432 - transcriptional regulator RcsB 2083 50.91 0 2317887..2320736 - 949 30063657 rcsC S2433 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2084 52.38 0 2321011..2321787 - 258 30063658 - S2434 - hypothetical protein 2085 54.42 0 2321792..2323441 - 549 30063659 - S2435 - hypothetical protein 2086 54.46 0 2323442..2323957 - 171 30063660 - S2436 - hypothetical protein 2087 53.59 0 2325716..2326342 - 208 30063661 - S2438 - IS911 orfB 2088 44.88 -1 2326582..2326884 - 100 30063662 - S2440 - IS911 orfA 2089 51.12 0 2329233..2329856 - 207 30063663 - S2442 - hypothetical protein 2090 53.81 0 2331690..2334317 - 875 30063664 gyrA S2444 - DNA gyrase subunit A 2091 54.36 0 2334464..2335186 + 240 30063665 ubiG S2445 - 3-demethylubiquinone-9 3-methyltransferase 2092 50.61 0 2338932..2339342 + 136 30063666 - S2447 - insertion sequence 2 OrfA protein 2093 55.30 0 2339300..2340205 + 301 161486466 - S2448 - insertion element IS2 transposase InsD 2094 53.63 0 2341076..2343361 + 761 30063668 nrdA S2449 - ribonucleotide-diphosphate reductase subunit alpha 2095 50.75 0 2343595..2344725 + 376 161486465 nrdB S2450 - ribonucleotide-diphosphate reductase subunit beta 2096 57.65 +1 2344725..2344979 + 84 30063670 yfaE S2451 - 2Fe-2S ferredoxin YfaE 2097 49.77 0 2345033..2345683 - 216 30063671 inaA S2452 - hypothetical protein 2098 41.55 -2 2345898..2346104 + 68 30063672 yfaH S2453 - hypothetical protein 2099 45.68 -1 2346146..2347222 - 358 30063673 glpQ S2454 - glycerophosphodiester phosphodiesterase 2100 53.05 0 2347227..2348585 - 452 30063674 glpT S2455 - sn-glycerol-3-phosphate transporter 2101 57.34 +1 2348858..2350486 + 542 30063675 glpA S2456 - sn-glycerol-3-phosphate dehydrogenase subunit A 2102 55.79 +1 2350476..2351735 + 419 30063676 glpB S2457 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 2103 53.82 0 2351732..2352922 + 396 30063677 glpC S2458 - sn-glycerol-3-phosphate dehydrogenase subunit C 2104 47.63 0 2353115..2354065 + 316 30063678 yfaD S2459 - hypothetical protein 2105 55.20 0 2354106..2354576 - 156 30063679 - S2460 - hypothetical protein 2106 54.11 0 2354631..2355833 - 400 30063680 - S2461 - competence damage-inducible protein A 2107 53.59 0 2355920..2356462 - 180 30063681 - S2462 - hypothetical protein 2108 47.93 0 2356804..2357166 + 120 30063682 yfaO S2463 - hypothetical protein 2109 43.18 -2 2357205..2357783 - 192 30063683 ais S2464 - protein induced by aluminum 2110 51.84 0 2358115..2359254 + 379 161486464 - S2465 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2111 49.54 0 2359258..2360226 + 322 30063685 - S2466 - undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 2112 51.32 0 2360657..2362207 + 516 30063686 ybfG S2467 - hypothetical protein 2113 52.75 0 2362204..2363094 + 296 30063687 - S2468 - hypothetical protein 2114 51.12 0 2363094..2364746 + 550 30063688 arnT S2469 - 4-amino-4-deoxy-L-arabinose transferase 2115 53.27 0 2364743..2365078 + 111 30063689 - S2567 - sucrose-6 phosphate hydrolase 2116 47.80 0 2365078..2365464 + 128 161486463 - S2471 - hypothetical protein 2117 56.19 +1 2365835..2367190 - 451 30063691 menE S2473 - O-succinylbenzoic acid--CoA ligase 2118 59.19 +1 2367187..2368149 - 320 30063692 menC S2474 - O-succinylbenzoate synthase 2119 55.13 0 2368149..2369006 - 285 30063693 menB S2475 - naphthoate synthase 2120 56.13 +1 2369021..2369779 - 252 30063694 yfbB S2476 - acyl-CoA thioester hydrolase YfbB 2121 57.93 +1 2369776..2371446 - 556 30063695 menD S2477 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 2122 53.63 0 2371535..2372830 - 431 161486462 menF S2478 - menaquinone-specific isochorismate synthase 2123 51.96 0 2372909..2373214 - 101 30063697 elaB S2479 - hypothetical protein 2124 47.62 0 2373269..2373730 - 153 30063698 elaA S2480 - hypothetical protein 2125 50.65 0 2373795..2374712 + 305 161486461 elaC S2481 - ribonuclease Z 2126 52.90 0 2375148..2375423 + 91 30063700 - S2482 - IS1 orfA 2127 53.37 0 2375342..2375845 + 167 30063701 - S2483 - IS1 orfB 2128 57.27 +1 2377618..2379075 - 485 161486460 nuoN S2487 - NADH dehydrogenase subunit N 2129 54.97 0 2379082..2380611 - 509 30063703 nuoM S2488 - NADH dehydrogenase subunit M 2130 57.00 +1 2380775..2382616 - 613 30063704 nuoL S2489 - NADH dehydrogenase subunit L 2131 54.46 0 2382613..2382915 - 100 30063705 nuoK S2490 - NADH dehydrogenase subunit K 2132 54.05 0 2382912..2383466 - 184 30063706 nuoJ S2491 - NADH dehydrogenase subunit J 2133 53.78 0 2383478..2384020 - 180 30063707 nuoI S2492 - NADH dehydrogenase subunit I 2134 54.40 0 2384035..2385012 - 325 30063708 nuoH S2493 - NADH dehydrogenase subunit H 2135 56.29 +1 2385009..2387735 - 908 30063709 nuoG S2494 - NADH dehydrogenase subunit G 2136 56.58 +1 2387788..2389125 - 445 30063710 nuoF S2495 - NADH dehydrogenase I subunit F 2137 55.29 0 2389122..2389622 - 166 30063711 nuoE S2496 - NADH dehydrogenase subunit E 2138 55.80 +1 2389625..2391427 - 600 30063712 nuoC S2497 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2139 51.89 0 2391521..2392183 - 220 30063713 nuoB S2498 - NADH dehydrogenase subunit B 2140 53.38 0 2392199..2392642 - 147 30063714 nuoA S2499 - NADH dehydrogenase subunit A 2141 49.84 0 2393273..2394211 - 312 30063715 lrhA S2500 - LysR family NADH dehydrogenase transcriptional regulator 2142 50.41 0 2395130..2396347 + 405 30063716 - S2501 - aminotransferase AlaT 2143 49.67 0 2396431..2397030 + 199 30063717 - S2502 - hypothetical protein 2144 52.43 0 2397089..2398921 - 610 30063718 yfbS S2503 - putative transport protein 2145 56.07 +1 2399008..2399658 - 216 30063719 yfbT S2504 - putative phosphatase 2146 47.27 -1 2399669..2400163 - 164 30063720 - S2505 - hypothetical protein 2147 50.00 0 2400246..2400701 - 151 30063721 - S2506 - hypothetical protein 2148 52.37 0 2401039..2402241 + 400 30063722 ackA S2507 - acetate kinase 2149 55.48 0 2402316..2404460 + 714 30063723 pta S2508 - phosphate acetyltransferase 2150 51.61 0 2404650..2406170 + 506 161486459 yfcC S2509 - hypothetical protein 2151 53.59 0 2406203..2406745 - 180 30063725 - S2510 - putative regulator 2152 51.27 0 2406803..2407354 - 183 30063726 yfcE S2511 - phosphodiesterase 2153 51.94 0 2407410..2408054 - 214 30063727 yfcF S2512 - hypothetical protein 2154 50.93 0 2408190..2408837 + 215 30063728 yfcG S2513 - putative S-transferase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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