version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1839 54.76 0 2025028..2025405 - 125 30063413 - S2121 - hypothetical protein 1840 52.90 0 2026462..2026737 + 91 30063414 - S2122 - IS1 orfA 1841 52.98 0 2026656..2027159 + 167 30063415 - S2123 - IS1 orfB 1842 52.10 0 2027802..2029751 - 649 30063416 - S2124 - putative tail protein 1843 49.11 0 2029836..2030171 - 111 30063417 - S2126 - bacteriophage protein 1844 51.54 0 2030171..2030527 - 118 30063418 - S2127 - hypothetical protein 1845 53.77 0 2030527..2032023 - 498 30063419 - S2128 - putative sheath protein 1846 50.59 0 2032191..2032445 - 84 30063420 - S2129 - hypothetical protein 1847 52.38 0 2032575..2033288 - 237 30063421 - S2130 - IS600 orfB 1848 46.20 -1 2033429..2033731 - 100 30063422 - S2131 - IS600 orfA 1849 54.70 0 2034606..2034956 - 116 30063423 - S2133 - ISSfl3 orfB 1850 51.81 0 2034953..2035450 - 165 30063424 - S2134 - ISSfl3 orfA 1851 46.20 -1 2036742..2037425 - 227 30063425 - S2139 - putative Q antiterminator of prophage 1852 52.19 0 2037422..2037787 - 121 30063426 - S2140 - putative crossover junction endodeoxyribonuclease 1853 53.09 0 2037788..2038774 - 328 30063427 - S2142 - hypothetical protein 1854 54.37 0 2038773..2039252 + 159 30063428 - S2141 - hypothetical protein 1855 51.17 0 2039294..2039506 - 70 30063429 - S2143 - putative cell killing protein of prophage 1856 47.32 -1 2040101..2040436 - 111 30063430 - S2144 - hypothetical protein 1857 47.15 -1 2040562..2040684 + 40 30063431 - S2145 - hypothetical protein 1858 43.97 -1 2040864..2041709 + 281 30063432 - S2146 - putative integrase for prophage CP-933U 1859 45.16 -1 2041906..2042742 + 278 30063433 - S2148 - hypothetical protein 1860 52.93 0 2043593..2044342 + 249 30063434 - S2152 - putative integrase 1861 46.75 -1 2045315..2045545 - 76 30063435 - S2155 - IS911 orfA 1862 46.20 -1 2046243..2046545 + 100 30063436 - S2157 - IS600 orfA 1863 52.24 0 2046686..2047399 + 237 30063437 - S2158 - IS600 orfB 1864 49.48 0 2047751..2049205 + 484 30063438 amn S2160 - AMP nucleosidase 1865 39.61 -2 2049548..2050264 + 238 30063439 - S2161 - hypothetical protein 1866 47.42 -1 2052641..2053591 - 316 30063440 cbl S2165 - transcriptional regulator Cbl 1867 48.37 0 2053693..2054610 - 305 30063441 nac S2166 - nitrogen assimilation transcriptional regulator 1868 49.04 0 2055069..2056004 - 311 30063442 erfK S2168 - hypothetical protein 1869 51.20 0 2056066..2057145 - 359 30063443 cobT S2169 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1870 53.36 0 2057157..2057900 - 247 30063444 cobS S2170 - cobalamin synthase 1871 52.38 0 2058418..2059131 - 237 30063445 - S2172 - IS600 orfB 1872 46.20 -1 2059272..2059574 - 100 30063446 - S2173 - IS600 orfA 1873 54.74 0 2059817..2060143 + 108 30063447 is629a S2175 - IS629 orfA 1874 54.78 0 2060379..2061026 + 215 30063448 is629b S2176 - IS629 orfB 1875 46.46 -1 2061887..2062282 - 131 30063449 yeeX S2177 - hypothetical protein 1876 50.22 0 2062757..2063431 + 224 30063450 - S2179 - ISSfl3 orfA 1877 52.58 0 2063428..2063640 + 70 30063451 - S2180 - ISSfl3 orfB 1878 53.18 0 2063643..2064161 - 172 30063452 - S2181 - IS629 orfA 1879 55.37 0 2064173..2064526 - 117 30063453 - S2182 - IS629 orfB 1880 52.37 0 2065084..2066685 + 533 30063454 - S2184 - ISSfl3 orfC 1881 45.40 -1 2066754..2067068 + 104 30063455 - S2185 - hypothetical protein 1882 49.40 0 2067528..2067776 - 82 30063456 - S2187 - ISSfl3 orfD 1883 50.79 0 2068553..2069125 - 190 30063457 - S2189 - ISSfl3 orfC 1884 54.99 0 2069122..2069472 - 116 30063458 - S2190 - ISSfl3 orfB 1885 51.81 0 2069469..2069966 - 165 30063459 - S2191 - ISSfl3 orfA 1886 50.11 0 2071243..2072667 + 474 30063460 sbcB S2193 - exonuclease I 1887 51.32 0 2072710..2072937 - 75 30063461 yeeD S2194 - hypothetical protein 1888 50.71 0 2072951..2074009 - 352 30063462 yeeE S2195 - putative transport system permease protein 1889 52.91 0 2074188..2075546 - 452 30063463 yeeF S2196 - putative amino acid/amine transport protein 1890 49.90 0 2075759..2076742 - 327 30063464 yeeY S2197 - putative LYSR-type transcriptional regulator 1891 51.15 0 2076788..2077612 - 274 30063465 - S2198 - putative enzyme of sugar metabolism 1892 52.04 0 2077971..2078264 - 97 30063466 - S2199 - IS1 orfB 1893 52.54 0 2078392..2078667 - 91 30063467 - S2200 - IS1 orfA 1894 47.62 0 2078701..2078973 - 90 30063468 yefM S2201 - antitoxin YefM 1895 54.56 0 2079443..2080342 + 299 30063469 hisG S2202 - ATP phosphoribosyltransferase 1896 57.78 +1 2080348..2081652 + 434 30063470 hisD S2203 - histidinol dehydrogenase 1897 54.81 0 2081649..2082719 + 356 30063471 hisC S2204 - histidinol-phosphate aminotransferase 1898 53.18 0 2082719..2083786 + 355 30063472 hisB S2205 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1899 55.67 +1 2083786..2084376 + 196 30063473 hisH S2206 - imidazole glycerol phosphate synthase subunit HisH 1900 56.23 +1 2084376..2085113 + 245 30063474 hisA S2207 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1901 51.99 0 2085095..2085871 + 258 30063475 hisF S2208 - imidazole glycerol phosphate synthase subunit HisF 1902 52.12 0 2085865..2086476 + 203 30063476 hisI S2209 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1903 45.66 -1 2086662..2087675 - 337 30063477 wzzB S2210 - regulator of length of O-antigen component of lipopolysaccharide chains 1904 50.53 0 2089155..2090561 - 468 30063478 gnd S2212 - 6-phosphogluconate dehydrogenase 1905 33.06 -2 2090670..2091029 - 119 30063479 - S2213 - hypothetical protein 1906 33.33 -2 2091026..2091577 - 183 30063480 - S2214 - hypothetical protein 1907 34.00 -2 2091678..2092277 - 199 30063481 - S2215 - hypothetical protein 1908 34.96 -2 2092448..2092939 - 163 30063482 - S2216 - hypothetical protein 1909 36.92 -2 2092997..2093386 - 129 30063483 rfbJ S2217 - glycosyl transferase 1910 30.13 -2 2093449..2093823 - 124 30063484 rfbI S2218 - glycosyl translocase 1911 27.33 -2 2093827..2094975 - 382 30063485 rfc S2219 - O-antigen polymerase 1912 30.46 -2 2094995..2095864 - 289 30063486 rfbG S2220 - dTDP-rhamnosyl transferase 1913 32.66 -2 2095893..2096783 - 296 30063487 rfbF S2221 - dTDP-rhamnosyl transferase 1914 34.37 -2 2096813..2098069 - 418 30063488 rfbE S2222 - polysaccharide biosynthesis protein 1915 37.73 -2 2098085..2098630 - 181 30063489 rfbC S2223 - dTDP-6-deoxy-L-mannose-dehydrogenase 1916 43.80 -1 2098634..2099512 - 292 30063490 rfbA S2225 - glucose-1-phosphate thymidylyltransferase 1917 49.22 0 2099571..2100470 - 299 30063491 rfbD S2226 - dTDP-4-dehydrorhamnose reductase 1918 44.20 -1 2100470..2101555 - 361 30063492 rfbB S2227 - dTDP-glucose 4,6 dehydratase 1919 51.57 0 2101928..2102821 - 297 30063493 galF S2228 - UTP--glucose-1-phosphate uridylyltransferase subunit GalF 1920 47.96 0 2102996..2104390 - 464 30063494 wcaM S2229 - putative colanic acid biosynthesis protein 1921 54.22 0 2104401..2105621 - 406 30063495 wcaL S2230 - putative colanic acid biosynthesis glycosyl transferase 1922 54.25 0 2105618..2106898 - 426 30063496 wcaK S2231 - putative pyruvyl transferase 1923 53.96 0 2107078..2108556 - 492 30063497 wzxC S2232 - colanic acid exporter 1924 53.91 0 2108558..2109952 - 464 30063498 wcaJ S2233 - putative UDP-glucose lipid carrier transferase 1925 55.07 0 2110007..2111377 - 456 30063499 cpsG S2234 - phosphomannomutase 1926 55.25 0 2111570..2113006 - 478 30063500 cpsB S2235 - mannose-1-phosphate guanyltransferase 1927 55.23 0 2113009..2114232 - 407 30063501 wcaI S2236 - glycosyl transferase 1928 55.42 0 2114229..2114708 - 159 30063502 wcaH S2237 - GDP-mannose mannosyl hydrolase 1929 55.83 +1 2114708..2115676 - 322 30063503 wcaG S2238 - putative nucleotide di-P-sugar epimerase or dehydratase 1930 54.28 0 2115679..2116800 - 373 30063504 gmd S2239 - GDP-D-mannose dehydratase 1931 47.72 0 2116826..2117374 - 182 30063505 wcaF S2240 - putative colanic acid biosynthesis acetyltransferase WcaF 1932 52.90 0 2117570..2117845 + 91 30063506 - S2242 - IS1 orfA 1933 52.98 0 2117764..2118267 + 167 30063507 - S2243 - IS1 orfB 1934 55.01 0 2120292..2120780 - 162 30063508 wcaB S2246 - putative colanic acid biosynthesis acetyltransferase WcaB 1935 53.03 0 2121715..2123877 - 720 161486469 - S2248 - tyrosine kinase 1936 53.83 0 2123880..2124323 - 147 30063510 wzb S2249 - tyrosine phosphatase 1937 53.25 0 2124329..2125468 - 379 30063511 wza S2250 - putative polysaccharide export protein 1938 53.03 0 2126127..2127710 + 527 30063512 yegH S2251 - putative transport protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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