version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 139 56.14 +1 161047..161844 + 265 30061711 fhuC S0146 - iron-hydroxamate transporter ATP-binding subunit 140 54.21 0 161844..162734 + 296 30061712 fhuD S0147 - iron-hydroxamate transporter substrate-binding subunit 141 59.46 +1 162731..164713 + 660 30061713 fhuB S0148 - iron-hydroxamate transporter permease subunit 142 55.74 +1 164748..166028 - 426 30061714 hemL S0149 - glutamate-1-semialdehyde aminotransferase 143 53.80 0 166253..167674 + 473 30061715 yadQ S0150 - chloride channel protein 144 51.59 0 167756..168100 + 114 30061716 yadR S0151 - iron-sulfur cluster insertion protein ErpA 145 53.04 0 168147..168770 - 207 30061717 yadS S0152 - hypothetical protein 146 52.68 0 168808..169608 - 266 30061718 yadT S0153 - vitamin B12-transporter protein BtuF 147 52.93 0 169601..170299 - 232 30061719 pfs S0154 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 148 47.89 0 170383..171900 + 505 30061720 dgt S0155 - deoxyguanosinetriphosphate triphosphohydrolase 149 53.96 0 172030..173454 + 474 30061721 htrA S0156 - serine endoprotease 150 44.19 -1 174854..175240 - 128 30061722 yaeH S0158 - hypothetical protein 151 52.85 0 175554..176378 - 274 30061723 dapD S0159 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 152 53.42 0 176409..179081 - 890 30061724 glnD S0160 - PII uridylyl-transferase 153 50.57 0 179143..179937 - 264 30061725 map S0161 - methionine aminopeptidase 154 51.10 0 180305..181030 + 241 30061726 rpsB S0162 - 30S ribosomal protein S2 155 49.65 0 181288..182139 + 283 30061727 tsf S0163 - elongation factor Ts 156 52.62 0 182286..183011 + 241 30061728 pyrH S0164 - uridylate kinase 157 50.90 0 183303..183860 + 185 30061729 frr S0165 - ribosome recycling factor 158 52.46 0 183952..185148 + 398 30061730 yaeM S0166 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 159 49.34 0 185334..186095 + 253 30061731 yaeS S0167 - undecaprenyl pyrophosphate synthase 160 50.58 0 186108..186965 + 285 161486544 cdsA S0168 - CDP-diglyceride synthase 161 50.85 0 186977..188329 + 450 30061733 yaeL S0169 - zinc metallopeptidase 162 50.31 0 188359..190791 + 810 30061734 yaeT S0170 - outer membrane protein assembly factor YaeT 163 49.59 0 190913..191398 + 161 30061735 hlpA S0171 - periplasmic chaperone 164 53.02 0 191402..192427 + 341 30061736 lpxD S0172 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 165 50.44 0 192532..192987 + 151 30061737 fabZ S0173 - (3R)-hydroxymyristoyl-ACP dehydratase 166 52.47 0 192991..193779 + 262 30061738 lpxA S0174 - UDP-N-acetylglucosamine acyltransferase 167 53.96 0 193779..194927 + 382 30061739 lpxB S0175 - lipid-A-disaccharide synthase 168 55.95 +1 194924..195520 + 198 30061740 rnhB S0176 - ribonuclease HII 169 55.04 0 195557..199039 + 1160 30061741 dnaE S0177 - DNA polymerase III subunit alpha 170 52.71 0 199052..200011 + 319 30061742 accA S0178 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 171 50.79 0 200110..202251 + 713 30061743 ldcC S0179 - lysine decarboxylase 2 172 51.79 0 202308..202697 + 129 161486543 yaeR S0180 - hypothetical protein 173 58.12 +1 202762..204060 + 432 30061745 tilS S0181 - tRNA(Ile)-lysidine synthetase 174 46.36 -1 204109..204369 - 86 30061746 yaeO S0182 - Rho-binding antiterminator 175 51.65 0 204722..205267 + 181 30061747 yaeQ S0183 - hypothetical protein 176 54.14 0 205264..205686 + 140 30061748 yaeJ S0184 - hypothetical protein 177 51.34 0 205700..206410 + 236 30061749 cutF S0185 - lipoprotein involved with copper homeostasis and adhesion 178 48.73 0 206565..207389 - 274 30061750 yaeF S0186 - hypothetical protein 179 54.45 0 207442..209160 - 572 30061751 proS S0187 - prolyl-tRNA synthetase 180 54.94 0 209271..209978 - 235 30061752 yaeB S0188 - hypothetical protein 181 53.33 0 209975..210379 - 134 30061753 rcsF S0189 - outer membrane lipoprotein 182 48.53 0 210497..211312 - 271 30061754 metQ S0190 - DL-methionine transporter substrate-binding subunit 183 51.68 0 211352..212005 - 217 30061755 yaeE S0191 - DL-methionine transporter permease subunit 184 52.33 0 211998..213029 - 343 30061756 metN S0192 - DL-methionine transporter ATP-binding subunit 185 50.17 0 213217..213792 + 191 30061757 yaeD S0193 - D,D-heptose 1,7-bisphosphate phosphatase 186 45.77 -1 219551..220354 + 267 30061758 dkgB S0200 - 2,5-diketo-D-gluconate reductase B 187 54.18 0 220393..221721 - 442 30061759 - S0201 - IS4 orf 188 49.29 0 221789..222703 - 304 30061760 yafC S0202 - putative transcriptional regulator LYSR-type 189 52.81 0 222944..223744 + 266 30061761 yafD S0203 - hypothetical protein 190 49.28 0 223972..224592 + 206 30061762 yafE S0204 - putative biotin synthesis protein 191 51.82 0 224640..225986 - 448 30061763 dniR S0205 - membrane-bound lytic murein transglycosylase D 192 39.95 -2 226058..226813 - 251 30061764 gloB S0206 - hydroxyacylglutathione hydrolase 193 49.59 0 226844..227569 + 241 30061765 yafS S0207 - hypothetical protein 194 50.43 0 227566..228033 - 155 30061766 rnhA S0208 - ribonuclease H 195 50.27 0 228098..228829 + 243 30061767 dnaQ S0209 - DNA polymerase III subunit epsilon 196 59.69 +2 229169..230215 - 348 30061768 safA S0211 - putative cytoplasmic protein 197 67.54 +2 230226..230339 - 37 30061769 - S0212 - hypothetical protein 198 61.76 +2 230483..230788 - 101 30061770 safB S0213 - periplasmic chaperone of fimbral assembly machinery 199 59.13 +1 230785..232668 - 627 30061771 safC S0214 - outer membrane usher protein 200 55.76 +1 232684..233178 - 164 30061772 - S0215 - putative cytoplasmic protein 201 59.08 +1 233373..234005 - 210 30061773 sat1 S0217 - putative cytoplasmic protein 202 48.15 0 233992..234369 - 125 30061774 sat2 S0218 - putative cytoplasmic protein 203 45.00 -1 234607..234906 - 99 30061775 - S0219 - putative cytoplasmic protein 204 50.36 0 234959..235369 + 136 30061776 - S0220 - insertion sequence 2 OrfA protein 205 55.41 0 235327..236232 + 301 30061777 - S0221 - insertion element IS2 transposase InsD 206 45.21 -1 236654..236956 + 100 30061778 - S0223 - IS911 orfA 207 54.29 0 236983..237822 + 279 30061779 - S0224 - IS911 orfB 208 50.37 0 238511..238780 - 89 30061781 - S0229 - putative endolysin R of prophage CP-933V 209 46.98 -1 239101..239415 - 104 30061782 - S0230 - hypothetical protein 210 50.00 0 239420..239635 - 71 30061783 - S0231 - lysis protein S 211 46.13 -1 239992..240366 + 124 30061784 - S0232 - hypothetical protein 212 47.30 -1 240390..240797 - 135 30061785 - S0233 - hypothetical protein 213 52.80 0 240794..241846 - 350 30061786 - S0235 - IS911 orfA 214 54.52 0 240794..241633 - 279 30061787 - S0234 - IS911 orfB 215 51.87 0 242170..242730 + 186 30061788 - S0236 - putative terminase large subunit 216 50.93 0 242699..243073 + 124 30061789 - S0237 - putative terminase large subunit 217 51.15 0 243074..245239 + 721 30061790 - S0238 - putative packaging glycoprotein 218 53.40 0 245253..246164 + 303 30061791 - S0239 - putative scaffolding protein 219 51.85 0 246164..247459 + 431 30061792 - S0240 - putative coat protein 220 47.62 0 247504..247734 + 76 30061793 - S0241 - hypothetical protein 221 48.50 0 247712..248212 + 166 30061794 - S0242 - putative DNA stabilization protein 222 50.74 0 248212..249630 + 472 30061795 - S0243 - putative packaged DNA stabilization protein 223 50.65 0 249630..250478 + 282 30061796 - S0244 - putative packaged DNA stabilization protein 224 49.12 0 250478..250933 + 151 30061797 - S0245 - putative head assembly protein 225 51.66 0 250936..251628 + 230 30061798 - S0246 - putative DNA transfer protein 226 51.35 0 251638..252969 + 443 30061799 - S0247 - putative prophage DNA injection protein 227 50.78 0 252970..254700 + 576 30061800 - S0248 - putative DNA transfer protein 228 54.74 0 254826..255152 + 108 30061801 - S0249 - IS629 orfA 229 54.78 0 255387..256034 + 215 30061802 - S0250 - IS629 orfB 230 47.49 -1 256085..256423 - 112 30061803 psiF S0251 - hypothetical protein 231 52.19 0 256524..258008 - 494 30061804 phoA S0252 - alkaline phosphatase 232 45.59 -1 258040..258300 - 86 30061805 yaiB S0253 - hypothetical protein 233 51.32 0 258763..259857 + 364 30061806 ddl S0254 - D-alanyl-alanine synthetase A 234 44.35 -1 259881..260225 - 114 30061807 - S0255 - hypothetical protein 235 52.75 0 260353..260661 + 102 30061808 - S0256 - hypothetical protein 236 53.24 0 260720..261814 - 364 30061809 yaiW S0257 - hypothetical protein 237 51.02 0 261827..263047 - 406 30061810 sbmA S0258 - transport protein 238 54.75 0 263399..264556 + 385 30061811 yaiH S0259 - beta-lactamase/D-alanine carboxypeptidase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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