version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1800 44.14 -1 1985546..1986628 + 360 30063374 nmpC S2073 - putative outer membrane porin protein C precurser 1801 37.13 -2 1987178..1987915 - 245 30063375 - S4819 - putative regulator 1802 42.39 -2 1987925..1988476 - 183 30063376 ybcL S4820 - putative kinase inhibitor 1803 43.24 -2 1988645..1988977 - 110 30063377 emrE S4821 - multidrug efflux protein 1804 54.92 0 1989322..1989636 - 104 30063378 fliE S2076 - flagellar hook-basal body protein FliE 1805 56.22 +1 1991502..1992497 + 331 30063379 fliG S2078 - flagellar motor switch protein G 1806 57.21 +1 1992490..1993176 + 228 30063380 fliH S2079 - flagellar assembly protein H 1807 58.01 +1 1993176..1994549 + 457 30063381 fliI S2080 - flagellum-specific ATP synthase 1808 54.43 0 1994909..1996036 + 375 30063382 fliK S2082 - flagellar hook-length control protein 1809 52.90 0 1996141..1996605 + 154 30063383 fliL S2083 - flagellar basal body-associated protein FliL 1810 53.03 0 1996610..1997614 + 334 30063384 fliM S2084 - flagellar motor switch protein FliM 1811 55.80 +1 1997611..1998024 + 137 30063385 fliN S2085 - flagellar motor switch protein FliN 1812 55.74 +1 1998027..1998392 + 121 161486472 fliO S2086 - flagellar biosynthesis protein FliO 1813 51.11 0 1999167..1999436 + 89 30063387 fliQ S2088 - flagellar biosynthesis protein FliQ 1814 47.20 -1 1999445..2000230 + 261 30063388 fliR S2089 - flagellar biosynthesis protein FliR 1815 38.30 -2 2000515..2001138 + 207 30063389 rcsA S2090 - positive regulator for ctr capsule biosynthesis, positive transcription factor 1816 50.79 0 2001182..2001370 - 62 30063390 dsrB S2091 - hypothetical protein 1817 48.68 0 2001533..2001760 + 75 30063391 - S2092 - hypothetical protein 1818 51.91 0 2004735..2004917 - 60 30063392 - S2096 - hypothetical protein 1819 52.72 0 2004996..2005913 - 305 30063393 yedI S2097 - hypothetical protein 1820 53.64 0 2006086..2007006 + 306 30063394 yedA S2098 - hypothetical protein 1821 56.26 +1 2006995..2007465 - 156 30063395 vsr S2099 - DNA mismatch endonuclease, patch repair protein 1822 51.87 0 2007446..2008864 - 472 30063396 dcm S2100 - DNA cytosine methylase 1823 50.43 0 2009769..2010581 - 270 30063397 - S2103 - ISEhe3 orfB 1824 49.10 0 2010638..2010916 - 92 30063398 - S2104 - ISEhe3 orfA 1825 45.27 -1 2010943..2011830 + 295 30063399 - S2105 - putative outer membrane pore protein 1826 54.86 0 2011755..2012660 - 301 161486471 - S2106 - insertion element IS2 transposase InsD 1827 52.46 0 2012618..2012983 - 121 161486470 - S2107 - insertion sequence 2 OrfA protein 1828 41.43 -2 2013047..2013256 + 69 30063402 - S2108 - putative outer membrane protein 1829 52.90 0 2013884..2014159 + 91 30063403 - S2109 - IS1 orfA 1830 53.37 0 2014078..2014581 + 167 30063404 - S2110 - IS1 orfB 1831 48.11 0 2014627..2015499 + 290 30063405 yedU S2111 - chaperone protein HchA 1832 39.44 -2 2015585..2016943 - 452 30063406 yedV S2112 - putative 2-component sensor protein 1833 44.64 -1 2016943..2017614 - 223 30063407 yedW S2113 - transcriptional regulatory protein YedW 1834 42.27 -2 2017747..2018160 + 137 30063408 - S2114 - hypothetical protein 1835 47.96 0 2019274..2019909 + 211 30063409 - S2116 - putative sulfite oxidase subunit YedZ 1836 38.86 -2 2020167..2020817 + 216 30063410 - S2117 - hypothetical protein 1837 49.63 0 2021895..2022164 - 89 30063411 - S2118 - putative bacteriophage protein 1838 47.93 0 2023205..2024848 + 547 30063412 ipaH_5 S2119 - invasion plasmid antigen 1839 54.76 0 2025028..2025405 - 125 30063413 - S2121 - hypothetical protein 1840 52.90 0 2026462..2026737 + 91 30063414 - S2122 - IS1 orfA 1841 52.98 0 2026656..2027159 + 167 30063415 - S2123 - IS1 orfB 1842 52.10 0 2027802..2029751 - 649 30063416 - S2124 - putative tail protein 1843 49.11 0 2029836..2030171 - 111 30063417 - S2126 - bacteriophage protein 1844 51.54 0 2030171..2030527 - 118 30063418 - S2127 - hypothetical protein 1845 53.77 0 2030527..2032023 - 498 30063419 - S2128 - putative sheath protein 1846 50.59 0 2032191..2032445 - 84 30063420 - S2129 - hypothetical protein 1847 52.38 0 2032575..2033288 - 237 30063421 - S2130 - IS600 orfB 1848 46.20 -1 2033429..2033731 - 100 30063422 - S2131 - IS600 orfA 1849 54.70 0 2034606..2034956 - 116 30063423 - S2133 - ISSfl3 orfB 1850 51.81 0 2034953..2035450 - 165 30063424 - S2134 - ISSfl3 orfA 1851 46.20 -1 2036742..2037425 - 227 30063425 - S2139 - putative Q antiterminator of prophage 1852 52.19 0 2037422..2037787 - 121 30063426 - S2140 - putative crossover junction endodeoxyribonuclease 1853 53.09 0 2037788..2038774 - 328 30063427 - S2142 - hypothetical protein 1854 54.37 0 2038773..2039252 + 159 30063428 - S2141 - hypothetical protein 1855 51.17 0 2039294..2039506 - 70 30063429 - S2143 - putative cell killing protein of prophage 1856 47.32 -1 2040101..2040436 - 111 30063430 - S2144 - hypothetical protein 1857 47.15 -1 2040562..2040684 + 40 30063431 - S2145 - hypothetical protein 1858 43.97 -1 2040864..2041709 + 281 30063432 - S2146 - putative integrase for prophage CP-933U 1859 45.16 -1 2041906..2042742 + 278 30063433 - S2148 - hypothetical protein 1860 52.93 0 2043593..2044342 + 249 30063434 - S2152 - putative integrase 1861 46.75 -1 2045315..2045545 - 76 30063435 - S2155 - IS911 orfA 1862 46.20 -1 2046243..2046545 + 100 30063436 - S2157 - IS600 orfA 1863 52.24 0 2046686..2047399 + 237 30063437 - S2158 - IS600 orfB 1864 49.48 0 2047751..2049205 + 484 30063438 amn S2160 - AMP nucleosidase 1865 39.61 -2 2049548..2050264 + 238 30063439 - S2161 - hypothetical protein 1866 47.42 -1 2052641..2053591 - 316 30063440 cbl S2165 - transcriptional regulator Cbl 1867 48.37 0 2053693..2054610 - 305 30063441 nac S2166 - nitrogen assimilation transcriptional regulator 1868 49.04 0 2055069..2056004 - 311 30063442 erfK S2168 - hypothetical protein 1869 51.20 0 2056066..2057145 - 359 30063443 cobT S2169 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1870 53.36 0 2057157..2057900 - 247 30063444 cobS S2170 - cobalamin synthase 1871 52.38 0 2058418..2059131 - 237 30063445 - S2172 - IS600 orfB 1872 46.20 -1 2059272..2059574 - 100 30063446 - S2173 - IS600 orfA 1873 54.74 0 2059817..2060143 + 108 30063447 is629a S2175 - IS629 orfA 1874 54.78 0 2060379..2061026 + 215 30063448 is629b S2176 - IS629 orfB 1875 46.46 -1 2061887..2062282 - 131 30063449 yeeX S2177 - hypothetical protein 1876 50.22 0 2062757..2063431 + 224 30063450 - S2179 - ISSfl3 orfA 1877 52.58 0 2063428..2063640 + 70 30063451 - S2180 - ISSfl3 orfB 1878 53.18 0 2063643..2064161 - 172 30063452 - S2181 - IS629 orfA 1879 55.37 0 2064173..2064526 - 117 30063453 - S2182 - IS629 orfB 1880 52.37 0 2065084..2066685 + 533 30063454 - S2184 - ISSfl3 orfC 1881 45.40 -1 2066754..2067068 + 104 30063455 - S2185 - hypothetical protein 1882 49.40 0 2067528..2067776 - 82 30063456 - S2187 - ISSfl3 orfD 1883 50.79 0 2068553..2069125 - 190 30063457 - S2189 - ISSfl3 orfC 1884 54.99 0 2069122..2069472 - 116 30063458 - S2190 - ISSfl3 orfB 1885 51.81 0 2069469..2069966 - 165 30063459 - S2191 - ISSfl3 orfA 1886 50.11 0 2071243..2072667 + 474 30063460 sbcB S2193 - exonuclease I 1887 51.32 0 2072710..2072937 - 75 30063461 yeeD S2194 - hypothetical protein 1888 50.71 0 2072951..2074009 - 352 30063462 yeeE S2195 - putative transport system permease protein 1889 52.91 0 2074188..2075546 - 452 30063463 yeeF S2196 - putative amino acid/amine transport protein 1890 49.90 0 2075759..2076742 - 327 30063464 yeeY S2197 - putative LYSR-type transcriptional regulator 1891 51.15 0 2076788..2077612 - 274 30063465 - S2198 - putative enzyme of sugar metabolism 1892 52.04 0 2077971..2078264 - 97 30063466 - S2199 - IS1 orfB 1893 52.54 0 2078392..2078667 - 91 30063467 - S2200 - IS1 orfA 1894 47.62 0 2078701..2078973 - 90 30063468 yefM S2201 - antitoxin YefM 1895 54.56 0 2079443..2080342 + 299 30063469 hisG S2202 - ATP phosphoribosyltransferase 1896 57.78 +1 2080348..2081652 + 434 30063470 hisD S2203 - histidinol dehydrogenase 1897 54.81 0 2081649..2082719 + 356 30063471 hisC S2204 - histidinol-phosphate aminotransferase 1898 53.18 0 2082719..2083786 + 355 30063472 hisB S2205 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1899 55.67 +1 2083786..2084376 + 196 30063473 hisH S2206 - imidazole glycerol phosphate synthase subunit HisH 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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