version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1704 57.64 +1 1884346..1885542 + 398 30063277 - S1944 - ISSfl4 orf 1705 44.18 -1 1886271..1886519 + 82 30063278 - S1946 - hypothetical protein 1706 47.03 -1 1887119..1888870 + 583 30063279 ipaH_4 S1947 - invasion plasmid antigen 1707 60.00 +2 1888871..1889050 - 59 30063280 - S1948 - hypothetical protein 1708 53.53 0 1889050..1889673 - 207 30063281 - S1949 - hypothetical protein 1709 50.09 0 1891397..1891939 + 180 30063282 - S1950 - hypothetical protein 1710 50.85 0 1892281..1892691 + 136 30063283 - S1952 - insertion sequence 2 OrfA protein 1711 55.30 0 1892649..1893554 + 301 161486475 - S1953 - insertion element IS2 transposase InsD 1712 39.13 -2 1894097..1894372 + 91 30063285 - S1954 - hypothetical protein 1713 50.32 0 1894472..1895896 + 474 30063286 - S1955 - putative exodeoxyribonuclease VIII 1714 48.91 0 1897139..1897459 + 106 30063287 - S1957 - putative host-nuclease inhibitor protein Gam 1715 47.32 -1 1897519..1898562 + 347 30063288 - S1958 - putative bacteriophage protein 1716 54.43 0 1898637..1898963 + 108 30063289 - S1959 - IS629 orfA 1717 54.78 0 1899199..1899846 + 215 30063290 - S1960 - IS629 orfB 1718 52.78 0 1900250..1900753 - 167 30063291 - S1961 - IS1 orfB 1719 52.90 0 1900672..1900947 - 91 30063292 - S1962 - IS1 orfA 1720 47.69 0 1901037..1901642 + 201 30063293 - S1963 - putative integrase for prophage CP-933R 1721 48.48 0 1902098..1902988 + 296 30063294 sitA S1964 - Iron transport protein 1722 51.33 0 1902988..1903815 + 275 30063295 sitB S1965 - Iron transport protein, ATP-binding component 1723 51.86 0 1903812..1904669 + 285 30063296 sitC S1966 - Iron transport protein 1724 49.42 0 1904666..1905523 + 285 30063297 sitD S1967 - Iron transport protein, inner membrane component 1725 52.30 0 1905724..1906287 - 187 30063298 - S1968 - hypothetical protein 1726 53.66 0 1906298..1907566 - 422 30063299 - S1969 - putative tail fiber protein 1727 49.69 0 1907590..1908078 - 162 30063300 - S1970 - putative tail fiber assembly protein 1728 49.51 0 1908138..1908341 - 67 30063301 - S1971 - hypothetical protein 1729 52.10 0 1908558..1909271 - 237 30063302 - S1972 - IS600 orfB 1730 48.10 0 1909479..1909688 - 69 30063303 - S1973 - IS1 orfB 1731 52.54 0 1909901..1910176 - 91 30063304 - S1975 - IS1 orfA 1732 53.43 0 1910765..1911391 - 208 30063305 - S1978 - IS911 orfB 1733 44.88 -1 1911631..1911933 - 100 30063306 - S1980 - IS911 orfA 1734 48.54 0 1912634..1914238 - 534 30063307 - S1981 - putative integrase 1735 46.52 -1 1914839..1915528 - 229 30063308 - S1986 - putative Q antiterminator encoded by prophage CP-933P 1736 51.11 0 1915525..1915884 - 119 30063309 - S1987 - putative crossover junction endodeoxyribonuclease 1737 52.10 0 1916531..1917244 + 237 30063310 - S1989 - IS600 orfB 1738 51.93 0 1917742..1918569 + 275 30063311 - S1990 - putative serine protease 1739 52.00 0 1918613..1919362 + 249 30063312 - S1991 - hypothetical protein 1740 50.18 0 1919359..1919928 + 189 30063313 - S1992 - hypothetical protein 1741 47.33 -1 1920052..1920294 + 80 30063314 - S1994 - hypothetical protein 1742 50.34 0 1920298..1920444 + 48 30063315 - S1995 - putative bacteriophage protein 1743 44.88 -1 1921491..1921793 - 100 30063316 - S1998 - IS911 orfA 1744 49.24 0 1922426..1922821 + 131 30063317 yecN S2000 - hypothetical protein 1745 50.54 0 1922862..1923605 + 247 30063318 yecO S2001 - hypothetical protein 1746 52.06 0 1923602..1924573 + 323 30063319 yecP S2002 - putative enzyme 1747 52.06 0 1924738..1927167 - 809 30063320 bisZ S2003 - biotin sulfoxide reductase 2 1748 47.68 0 1927192..1928292 - 366 30063321 yecK S2004 - putative cytochrome C-type protein 1749 49.89 0 1928680..1929120 - 146 30063322 cutC S2005 - copper homeostasis protein 1750 50.79 0 1929440..1930006 - 188 30063323 yecM S2006 - hypothetical protein 1751 53.00 0 1930222..1931955 + 577 30063324 argS S2007 - arginyl-tRNA synthetase 1752 52.18 0 1932840..1933274 - 144 30063325 - S2009 - IS629 orfB 1753 53.21 0 1933709..1934035 - 108 30063326 - S2011 - IS629 orfA 1754 55.75 +1 1934087..1934425 - 112 30063327 flhE S2012 - flagellar protein 1755 55.11 0 1936449..1937642 - 397 30063328 flhB S2014 - flagellar biosynthesis protein FlhB 1756 47.06 -1 1937878..1938336 + 152 30063329 - S2015 - hypothetical protein 1757 44.88 -1 1939126..1939428 - 100 30063330 - S2018 - IS911 orfA 1758 45.20 -1 1939569..1939964 + 131 30063331 - S2019 - hypothetical protein 1759 52.24 0 1940459..1941172 + 237 30063332 - S2020 - IS600 orfB 1760 53.33 0 1941677..1942321 - 214 30063333 cheZ S2021 - chemotaxis regulator CheZ 1761 48.97 0 1942332..1942721 - 129 30063334 cheY S2022 - chemotaxis regulatory protein CheY 1762 53.71 0 1942736..1943785 - 349 30063335 cheB S2023 - chemotaxis-specific methylesterase 1763 53.89 0 1943788..1944648 - 286 30063336 cheR S2024 - chemotaxis methyltransferase CheR 1764 53.87 0 1944667..1946268 - 533 30063337 tap S2025 - methyl-accepting protein IV 1765 52.71 0 1946314..1947975 - 553 30063338 tar S2026 - methyl-accepting chemotaxis protein II, aspartate sensor receptor 1766 51.59 0 1948120..1948623 - 167 30063339 cheW S2027 - purine-binding chemotaxis protein 1767 53.18 0 1948644..1950608 - 654 30063340 cheA S2028 - chemotaxis protein CheA 1768 53.07 0 1950613..1951539 - 308 30063341 motB S2029 - flagellar motor protein MotB 1769 51.69 0 1951536..1952423 - 295 30063342 motA S2030 - flagellar motor protein MotA 1770 49.05 0 1952550..1953128 - 192 30063343 flhC S2031 - transcriptional activator FlhC 1771 52.90 0 1953391..1953666 + 91 30063344 - S2033 - IS1 orfA 1772 52.78 0 1953585..1954088 + 167 30063345 - S2034 - IS1 orfB 1773 50.81 0 1954526..1955326 - 266 30063346 otsB S2036 - trehalose-6-phosphate phosphatase 1774 50.81 0 1955493..1956482 - 329 30063347 araH S2038 - L-arabinose transporter permease protein 1775 52.48 0 1956494..1958008 - 504 30063348 araG S2039 - L-arabinose transporter ATP-binding protein 1776 48.21 0 1959864..1960367 + 167 30063349 yecI S2041 - ferritin-like protein 1777 50.62 0 1961162..1961485 + 107 30063351 - S2043 - hypothetical protein 1778 42.97 -2 1961656..1962153 + 165 30063352 ftn S2044 - ferritin 1779 47.08 -1 1962190..1962429 - 79 30063353 yecH S2045 - hypothetical protein 1780 50.91 0 1962619..1963830 + 403 30063354 tyrP S2046 - tyrosine-specific transport protein 1781 52.40 0 1963892..1964557 - 221 30063355 yecA S2047 - hypothetical protein 1782 52.46 0 1965207..1965755 - 182 30063356 pgsA S2051 - phosphatidylglycerophosphate synthetase 1783 51.72 0 1965812..1967644 - 610 161486474 uvrC S2052 - excinuclease ABC subunit C 1784 49.01 0 1967641..1968297 - 218 30063358 uvrY S2053 - response regulator 1785 48.00 0 1968756..1968980 + 74 30063359 yecF S2054 - hypothetical protein 1786 47.05 -1 1969007..1969633 - 208 30063360 sdiA S2055 - transcriptional regulator of ftsQAZ gene cluster 1787 54.58 0 1969863..1970615 - 250 30063361 yecC S2056 - putative amino-acid ABC transporter ATP-binding protein YecC 1788 53.36 0 1970612..1971280 - 222 30063362 yecS S2057 - putative transport system permease protein (former yecC) 1789 54.10 0 1971295..1972281 - 328 161486473 yedO S2058 - D-cysteine desulfhydrase 1790 46.26 -1 1973275..1973862 - 195 30063364 fliZ S2060 - protein FliZ 1791 48.22 0 1974756..1976408 - 550 30063365 fliC S2062 - flagellin 1792 52.24 0 1976674..1978080 + 468 30063366 fliD S2063 - flagellar capping protein 1793 48.18 0 1978105..1978515 + 136 30063367 fliS S2064 - flagellar protein FliS 1794 51.91 0 1978515..1978880 + 121 30063368 fliT S2065 - flagellar biosynthesis protein FliT 1795 49.80 0 1978958..1980445 + 495 30063369 amyA S2066 - cytoplasmic alpha-amylase 1796 57.00 +1 1980479..1980892 - 137 30063370 yedD S2067 - hypothetical protein 1797 54.48 0 1981079..1982284 + 401 30063371 yedE S2068 - putative inner membrane protein 1798 48.29 0 1982281..1982514 + 77 30063372 yedF S2069 - hypothetical protein 1799 52.17 0 1983331..1984137 - 268 30063373 - S2072 - putative virulence protein 1800 44.14 -1 1985546..1986628 + 360 30063374 nmpC S2073 - putative outer membrane porin protein C precurser 1801 37.13 -2 1987178..1987915 - 245 30063375 - S4819 - putative regulator 1802 42.39 -2 1987925..1988476 - 183 30063376 ybcL S4820 - putative kinase inhibitor 1803 43.24 -2 1988645..1988977 - 110 30063377 emrE S4821 - multidrug efflux protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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