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Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1666 55.30 0 1843312..1844217 - 301 161486478 - S1899 - insertion element IS2 transposase InsD 1667 53.01 0 1844175..1844540 - 121 161486477 - S1900 - insertion sequence 2 OrfA protein 1668 52.02 0 1844699..1845217 + 172 30063241 - S1901 - putative resistance protein 1669 52.89 0 1845214..1845663 + 149 30063242 - S1902 - hypothetical protein 1670 53.42 0 1845664..1845897 - 77 30063243 - S1903 - hypothetical protein 1671 44.58 -1 1845983..1846231 - 82 30063244 - S1904 - hypothetical protein 1672 53.19 0 1847867..1849291 - 474 30063245 - S1905 - gamma-aminobutyraldehyde dehydrogenase 1673 54.34 0 1849313..1850107 - 264 30063246 - S1906 - putative transport system permease protein 1674 55.12 0 1850946..1851560 + 204 30063247 - S1908 - IS1294 transposase 1675 52.80 0 1851560..1852006 + 148 30063248 - S1909 - IS1294 transposase 1676 50.24 0 1852484..1852690 - 68 30063249 - S1910 - IS629 orfB 1677 56.67 +1 1852746..1853105 - 119 30063250 - S1911 - IS629 orfB 1678 53.52 0 1853368..1853694 - 108 30063251 - S1912 - IS629 orfA 1679 46.20 -1 1856431..1856772 - 113 30063252 - S1915 - hypothetical protein 1680 50.40 0 1857661..1858035 - 124 30063253 - S1917 - hypothetical protein 1681 48.48 0 1858174..1858404 + 76 30063254 holE S1918 - DNA polymerase III subunit theta 1682 51.88 0 1858737..1859162 + 141 30063255 - S1919 - hypothetical protein 1683 51.43 0 1859186..1859848 + 220 30063256 - S1920 - exodeoxyribonuclease X 1684 49.93 0 1859845..1861905 - 686 30063257 ptrB S1921 - protease 2 1685 52.58 0 1862115..1862774 - 219 30063258 yebE S1922 - hypothetical protein 1686 50.42 0 1863101..1863457 - 118 30063259 yebF S1923 - hypothetical protein 1687 53.69 0 1863948..1865126 + 392 30063260 purT S1925 - phosphoribosylglycinamide formyltransferase 2 1688 56.07 +1 1865182..1865823 - 213 30063261 eda S1926 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1689 53.59 0 1865860..1867671 - 603 30063262 edd S1927 - phosphogluconate dehydratase 1690 51.42 0 1867906..1869381 - 491 30063263 zwf S1928 - glucose-6-phosphate 1-dehydrogenase 1691 50.36 0 1869719..1870540 + 273 30063264 yebK S1929 - DNA-binding transcriptional regulator HexR 1692 52.60 0 1870718..1872160 + 480 30063265 pykA S1930 - pyruvate kinase 1693 51.34 0 1872291..1873262 - 323 30063266 msbB S1931 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1694 52.15 0 1873382..1874704 - 440 30063267 yebA S1932 - hypothetical protein 1695 49.20 0 1874720..1875652 - 310 161486476 znuA S1933 - high-affinity zinc transporter periplasmic component 1696 48.81 0 1875731..1876486 + 251 30063269 znuC S1934 - high-affinity zinc transporter ATPase 1697 51.02 0 1876483..1877268 + 261 30063270 znuB S1935 - high-affinity zinc transporter membrane component 1698 52.32 0 1877415..1878425 - 336 30063271 ruvB S1936 - Holliday junction DNA helicase B 1699 52.61 0 1878434..1879045 - 203 30063272 ruvA S1937 - Holliday junction DNA helicase motor protein 1700 56.13 +1 1879923..1880444 - 173 30063273 ruvC S1939 - Holliday junction resolvase 1701 52.77 0 1880479..1881219 - 246 30063274 yebC S1940 - hypothetical protein 1702 52.38 0 1881248..1881730 - 160 30063275 ntpA S1941 - dATP pyrophosphohydrolase 1703 53.81 0 1881818..1883590 - 590 30063276 aspS S1942 - aspartyl-tRNA synthetase 1704 57.64 +1 1884346..1885542 + 398 30063277 - S1944 - ISSfl4 orf 1705 44.18 -1 1886271..1886519 + 82 30063278 - S1946 - hypothetical protein 1706 47.03 -1 1887119..1888870 + 583 30063279 ipaH_4 S1947 - invasion plasmid antigen 1707 60.00 +2 1888871..1889050 - 59 30063280 - S1948 - hypothetical protein 1708 53.53 0 1889050..1889673 - 207 30063281 - S1949 - hypothetical protein 1709 50.09 0 1891397..1891939 + 180 30063282 - S1950 - hypothetical protein 1710 50.85 0 1892281..1892691 + 136 30063283 - S1952 - insertion sequence 2 OrfA protein 1711 55.30 0 1892649..1893554 + 301 161486475 - S1953 - insertion element IS2 transposase InsD 1712 39.13 -2 1894097..1894372 + 91 30063285 - S1954 - hypothetical protein 1713 50.32 0 1894472..1895896 + 474 30063286 - S1955 - putative exodeoxyribonuclease VIII 1714 48.91 0 1897139..1897459 + 106 30063287 - S1957 - putative host-nuclease inhibitor protein Gam 1715 47.32 -1 1897519..1898562 + 347 30063288 - S1958 - putative bacteriophage protein 1716 54.43 0 1898637..1898963 + 108 30063289 - S1959 - IS629 orfA 1717 54.78 0 1899199..1899846 + 215 30063290 - S1960 - IS629 orfB 1718 52.78 0 1900250..1900753 - 167 30063291 - S1961 - IS1 orfB 1719 52.90 0 1900672..1900947 - 91 30063292 - S1962 - IS1 orfA 1720 47.69 0 1901037..1901642 + 201 30063293 - S1963 - putative integrase for prophage CP-933R 1721 48.48 0 1902098..1902988 + 296 30063294 sitA S1964 - Iron transport protein 1722 51.33 0 1902988..1903815 + 275 30063295 sitB S1965 - Iron transport protein, ATP-binding component 1723 51.86 0 1903812..1904669 + 285 30063296 sitC S1966 - Iron transport protein 1724 49.42 0 1904666..1905523 + 285 30063297 sitD S1967 - Iron transport protein, inner membrane component 1725 52.30 0 1905724..1906287 - 187 30063298 - S1968 - hypothetical protein 1726 53.66 0 1906298..1907566 - 422 30063299 - S1969 - putative tail fiber protein 1727 49.69 0 1907590..1908078 - 162 30063300 - S1970 - putative tail fiber assembly protein 1728 49.51 0 1908138..1908341 - 67 30063301 - S1971 - hypothetical protein 1729 52.10 0 1908558..1909271 - 237 30063302 - S1972 - IS600 orfB 1730 48.10 0 1909479..1909688 - 69 30063303 - S1973 - IS1 orfB 1731 52.54 0 1909901..1910176 - 91 30063304 - S1975 - IS1 orfA 1732 53.43 0 1910765..1911391 - 208 30063305 - S1978 - IS911 orfB 1733 44.88 -1 1911631..1911933 - 100 30063306 - S1980 - IS911 orfA 1734 48.54 0 1912634..1914238 - 534 30063307 - S1981 - putative integrase 1735 46.52 -1 1914839..1915528 - 229 30063308 - S1986 - putative Q antiterminator encoded by prophage CP-933P 1736 51.11 0 1915525..1915884 - 119 30063309 - S1987 - putative crossover junction endodeoxyribonuclease 1737 52.10 0 1916531..1917244 + 237 30063310 - S1989 - IS600 orfB 1738 51.93 0 1917742..1918569 + 275 30063311 - S1990 - putative serine protease 1739 52.00 0 1918613..1919362 + 249 30063312 - S1991 - hypothetical protein 1740 50.18 0 1919359..1919928 + 189 30063313 - S1992 - hypothetical protein 1741 47.33 -1 1920052..1920294 + 80 30063314 - S1994 - hypothetical protein 1742 50.34 0 1920298..1920444 + 48 30063315 - S1995 - putative bacteriophage protein 1743 44.88 -1 1921491..1921793 - 100 30063316 - S1998 - IS911 orfA 1744 49.24 0 1922426..1922821 + 131 30063317 yecN S2000 - hypothetical protein 1745 50.54 0 1922862..1923605 + 247 30063318 yecO S2001 - hypothetical protein 1746 52.06 0 1923602..1924573 + 323 30063319 yecP S2002 - putative enzyme 1747 52.06 0 1924738..1927167 - 809 30063320 bisZ S2003 - biotin sulfoxide reductase 2 1748 47.68 0 1927192..1928292 - 366 30063321 yecK S2004 - putative cytochrome C-type protein 1749 49.89 0 1928680..1929120 - 146 30063322 cutC S2005 - copper homeostasis protein 1750 50.79 0 1929440..1930006 - 188 30063323 yecM S2006 - hypothetical protein 1751 53.00 0 1930222..1931955 + 577 30063324 argS S2007 - arginyl-tRNA synthetase 1752 52.18 0 1932840..1933274 - 144 30063325 - S2009 - IS629 orfB 1753 53.21 0 1933709..1934035 - 108 30063326 - S2011 - IS629 orfA 1754 55.75 +1 1934087..1934425 - 112 30063327 flhE S2012 - flagellar protein 1755 55.11 0 1936449..1937642 - 397 30063328 flhB S2014 - flagellar biosynthesis protein FlhB 1756 47.06 -1 1937878..1938336 + 152 30063329 - S2015 - hypothetical protein 1757 44.88 -1 1939126..1939428 - 100 30063330 - S2018 - IS911 orfA 1758 45.20 -1 1939569..1939964 + 131 30063331 - S2019 - hypothetical protein 1759 52.24 0 1940459..1941172 + 237 30063332 - S2020 - IS600 orfB 1760 53.33 0 1941677..1942321 - 214 30063333 cheZ S2021 - chemotaxis regulator CheZ 1761 48.97 0 1942332..1942721 - 129 30063334 cheY S2022 - chemotaxis regulatory protein CheY 1762 53.71 0 1942736..1943785 - 349 30063335 cheB S2023 - chemotaxis-specific methylesterase 1763 53.89 0 1943788..1944648 - 286 30063336 cheR S2024 - chemotaxis methyltransferase CheR 1764 53.87 0 1944667..1946268 - 533 30063337 tap S2025 - methyl-accepting protein IV 1765 52.71 0 1946314..1947975 - 553 30063338 tar S2026 - methyl-accepting chemotaxis protein II, aspartate sensor receptor 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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