version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1637 38.17 -2 1797701..1798858 + 385 30063210 - S1859 - putative enzyme 1638 45.66 -1 1800872..1803232 + 786 30063211 yddB S1861 - hypothetical protein 1639 52.78 0 1803502..1804005 - 167 30063212 - S1862 - IS1 orfB 1640 52.90 0 1803924..1804199 - 91 30063213 - S1863 - IS1 orfA 1641 52.90 0 1806810..1807085 + 91 30063214 - S1865 - IS1 orfA 1642 53.37 0 1807004..1807507 + 167 30063215 - S1866 - IS1 orfB 1643 53.89 0 1807985..1809385 + 466 30063216 gadB S1867 - glutamate decarboxylase isozyme 1644 48.31 0 1809541..1811076 + 511 30063217 xasA S1868 - acid sensitivity protein, putative transporter 1645 51.82 0 1811207..1812526 + 439 30063218 - S1869 - hypothetical protein 1646 53.51 0 1815194..1816090 + 298 30063219 - S1873 - ATP-dependent peptide transporter membrane subunit 1647 54.10 0 1816087..1817073 + 328 30063220 - S1874 - putative ATP-binding component of a transport system 1648 50.23 0 1818048..1818479 - 143 30063221 osmC S1876 - osmotically inducible protein 1649 52.78 0 1818652..1819155 - 167 30063222 - S1877 - IS1 orfB 1650 52.90 0 1819074..1819349 - 91 30063223 - S1878 - IS1 orfA 1651 51.88 0 1819537..1821234 + 565 30063224 sfcA S1879 - malate dehydrogenase 1652 52.52 0 1821368..1822378 + 336 30063225 adhP S1880 - alcohol dehydrogenase 1653 49.04 0 1822446..1822808 + 120 30063226 yddM S1881 - hypothetical protein 1654 50.15 0 1823036..1823689 - 217 30063227 fdnI S1882 - formate dehydrogenase-N subunit gamma 1655 54.92 0 1823682..1824566 - 294 30063228 fdnH S1883 - formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit 1656 53.84 0 1824579..1827626 - 1015 30063229 fdnG S1884 - formate dehydrogenase-N, nitrate-inducible, alpha subunit 1657 49.77 0 1827858..1828739 + 293 30063230 yddG S1885 - hypothetical protein 1658 44.50 -1 1828994..1830094 + 366 30063231 - S1887 - putative outer membrane porin protein 1659 32.22 -2 1830853..1831842 + 329 30063232 - S1888 - putative glycoprotein 1660 52.90 0 1832130..1832405 + 91 30063233 - S1890 - IS1 orfA 1661 53.37 0 1832324..1832827 + 167 30063234 - S1891 - IS1 orfB 1662 49.10 0 1833285..1834673 + 462 30063235 narU S1892 - nitrite extrusion protein 2 1663 54.63 0 1839823..1841043 + 406 30063236 - S1896 - IS91 orf 1664 43.71 -1 1841282..1842004 - 240 30063237 - S1897 - putative DNA-binding transcriptional regulator 1665 52.52 0 1842145..1843275 - 376 30063238 yncB S1898 - putative oxidoreductase 1666 55.30 0 1843312..1844217 - 301 161486478 - S1899 - insertion element IS2 transposase InsD 1667 53.01 0 1844175..1844540 - 121 161486477 - S1900 - insertion sequence 2 OrfA protein 1668 52.02 0 1844699..1845217 + 172 30063241 - S1901 - putative resistance protein 1669 52.89 0 1845214..1845663 + 149 30063242 - S1902 - hypothetical protein 1670 53.42 0 1845664..1845897 - 77 30063243 - S1903 - hypothetical protein 1671 44.58 -1 1845983..1846231 - 82 30063244 - S1904 - hypothetical protein 1672 53.19 0 1847867..1849291 - 474 30063245 - S1905 - gamma-aminobutyraldehyde dehydrogenase 1673 54.34 0 1849313..1850107 - 264 30063246 - S1906 - putative transport system permease protein 1674 55.12 0 1850946..1851560 + 204 30063247 - S1908 - IS1294 transposase 1675 52.80 0 1851560..1852006 + 148 30063248 - S1909 - IS1294 transposase 1676 50.24 0 1852484..1852690 - 68 30063249 - S1910 - IS629 orfB 1677 56.67 +1 1852746..1853105 - 119 30063250 - S1911 - IS629 orfB 1678 53.52 0 1853368..1853694 - 108 30063251 - S1912 - IS629 orfA 1679 46.20 -1 1856431..1856772 - 113 30063252 - S1915 - hypothetical protein 1680 50.40 0 1857661..1858035 - 124 30063253 - S1917 - hypothetical protein 1681 48.48 0 1858174..1858404 + 76 30063254 holE S1918 - DNA polymerase III subunit theta 1682 51.88 0 1858737..1859162 + 141 30063255 - S1919 - hypothetical protein 1683 51.43 0 1859186..1859848 + 220 30063256 - S1920 - exodeoxyribonuclease X 1684 49.93 0 1859845..1861905 - 686 30063257 ptrB S1921 - protease 2 1685 52.58 0 1862115..1862774 - 219 30063258 yebE S1922 - hypothetical protein 1686 50.42 0 1863101..1863457 - 118 30063259 yebF S1923 - hypothetical protein 1687 53.69 0 1863948..1865126 + 392 30063260 purT S1925 - phosphoribosylglycinamide formyltransferase 2 1688 56.07 +1 1865182..1865823 - 213 30063261 eda S1926 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1689 53.59 0 1865860..1867671 - 603 30063262 edd S1927 - phosphogluconate dehydratase 1690 51.42 0 1867906..1869381 - 491 30063263 zwf S1928 - glucose-6-phosphate 1-dehydrogenase 1691 50.36 0 1869719..1870540 + 273 30063264 yebK S1929 - DNA-binding transcriptional regulator HexR 1692 52.60 0 1870718..1872160 + 480 30063265 pykA S1930 - pyruvate kinase 1693 51.34 0 1872291..1873262 - 323 30063266 msbB S1931 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1694 52.15 0 1873382..1874704 - 440 30063267 yebA S1932 - hypothetical protein 1695 49.20 0 1874720..1875652 - 310 161486476 znuA S1933 - high-affinity zinc transporter periplasmic component 1696 48.81 0 1875731..1876486 + 251 30063269 znuC S1934 - high-affinity zinc transporter ATPase 1697 51.02 0 1876483..1877268 + 261 30063270 znuB S1935 - high-affinity zinc transporter membrane component 1698 52.32 0 1877415..1878425 - 336 30063271 ruvB S1936 - Holliday junction DNA helicase B 1699 52.61 0 1878434..1879045 - 203 30063272 ruvA S1937 - Holliday junction DNA helicase motor protein 1700 56.13 +1 1879923..1880444 - 173 30063273 ruvC S1939 - Holliday junction resolvase 1701 52.77 0 1880479..1881219 - 246 30063274 yebC S1940 - hypothetical protein 1702 52.38 0 1881248..1881730 - 160 30063275 ntpA S1941 - dATP pyrophosphohydrolase 1703 53.81 0 1881818..1883590 - 590 30063276 aspS S1942 - aspartyl-tRNA synthetase 1704 57.64 +1 1884346..1885542 + 398 30063277 - S1944 - ISSfl4 orf 1705 44.18 -1 1886271..1886519 + 82 30063278 - S1946 - hypothetical protein 1706 47.03 -1 1887119..1888870 + 583 30063279 ipaH_4 S1947 - invasion plasmid antigen 1707 60.00 +2 1888871..1889050 - 59 30063280 - S1948 - hypothetical protein 1708 53.53 0 1889050..1889673 - 207 30063281 - S1949 - hypothetical protein 1709 50.09 0 1891397..1891939 + 180 30063282 - S1950 - hypothetical protein 1710 50.85 0 1892281..1892691 + 136 30063283 - S1952 - insertion sequence 2 OrfA protein 1711 55.30 0 1892649..1893554 + 301 161486475 - S1953 - insertion element IS2 transposase InsD 1712 39.13 -2 1894097..1894372 + 91 30063285 - S1954 - hypothetical protein 1713 50.32 0 1894472..1895896 + 474 30063286 - S1955 - putative exodeoxyribonuclease VIII 1714 48.91 0 1897139..1897459 + 106 30063287 - S1957 - putative host-nuclease inhibitor protein Gam 1715 47.32 -1 1897519..1898562 + 347 30063288 - S1958 - putative bacteriophage protein 1716 54.43 0 1898637..1898963 + 108 30063289 - S1959 - IS629 orfA 1717 54.78 0 1899199..1899846 + 215 30063290 - S1960 - IS629 orfB 1718 52.78 0 1900250..1900753 - 167 30063291 - S1961 - IS1 orfB 1719 52.90 0 1900672..1900947 - 91 30063292 - S1962 - IS1 orfA 1720 47.69 0 1901037..1901642 + 201 30063293 - S1963 - putative integrase for prophage CP-933R 1721 48.48 0 1902098..1902988 + 296 30063294 sitA S1964 - Iron transport protein 1722 51.33 0 1902988..1903815 + 275 30063295 sitB S1965 - Iron transport protein, ATP-binding component 1723 51.86 0 1903812..1904669 + 285 30063296 sitC S1966 - Iron transport protein 1724 49.42 0 1904666..1905523 + 285 30063297 sitD S1967 - Iron transport protein, inner membrane component 1725 52.30 0 1905724..1906287 - 187 30063298 - S1968 - hypothetical protein 1726 53.66 0 1906298..1907566 - 422 30063299 - S1969 - putative tail fiber protein 1727 49.69 0 1907590..1908078 - 162 30063300 - S1970 - putative tail fiber assembly protein 1728 49.51 0 1908138..1908341 - 67 30063301 - S1971 - hypothetical protein 1729 52.10 0 1908558..1909271 - 237 30063302 - S1972 - IS600 orfB 1730 48.10 0 1909479..1909688 - 69 30063303 - S1973 - IS1 orfB 1731 52.54 0 1909901..1910176 - 91 30063304 - S1975 - IS1 orfA 1732 53.43 0 1910765..1911391 - 208 30063305 - S1978 - IS911 orfB 1733 44.88 -1 1911631..1911933 - 100 30063306 - S1980 - IS911 orfA 1734 48.54 0 1912634..1914238 - 534 30063307 - S1981 - putative integrase 1735 46.52 -1 1914839..1915528 - 229 30063308 - S1986 - putative Q antiterminator encoded by prophage CP-933P 1736 51.11 0 1915525..1915884 - 119 30063309 - S1987 - putative crossover junction endodeoxyribonuclease 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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