version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1556 48.71 0 1705870..1707345 + 491 30063129 ydgA S1768 - hypothetical protein 1557 47.24 -1 1707605..1708870 - 421 161486483 uidC S1769 - membrane-associated protein 1558 52.11 0 1709940..1711643 - 567 30063131 uidA S1771 - beta-D-glucuronidase 1559 50.25 0 1712031..1712621 - 196 30063132 uidR S1772 - repressor for uid operon 1560 52.58 0 1713026..1713529 - 167 30063133 - S1774 - IS1 orfB 1561 52.90 0 1713448..1713723 - 91 30063134 - S1775 - IS1 orfA 1562 54.42 0 1714506..1715534 - 342 30063135 malI S1777 - DNA-binding transcriptional repressor MalI 1563 52.79 0 1715709..1717301 + 530 30063136 malX S1778 - bifunctional maltose and glucose-specific PTS system components IICB 1564 51.24 0 1717311..1718483 + 390 30063137 malY S1779 - cystathionine beta-lyase; maltose regulon modulator 1565 53.49 0 1718587..1719588 + 333 30063138 add S1780 - adenosine deaminase 1566 53.89 0 1719624..1720664 - 346 161486482 - S1781 - putative oxidoreductase 1567 47.22 -1 1721305..1721520 + 71 30063140 - S1782 - oriC-binding nucleoid-associated protein 1568 48.75 0 1721606..1722046 + 146 30063141 - S1783 - hypothetical protein 1569 51.37 0 1722123..1722704 + 193 30063142 - S1784 - Na(+)-translocating NADH-quinone reductase subunit E 1570 54.40 0 1722704..1723282 + 192 30063143 - S1785 - electron transport complex protein RnfB 1571 55.06 0 1723275..1725497 + 740 30063144 - S1786 - electron transport complex protein RnfC 1572 53.07 0 1725498..1726556 + 352 30063145 rnfD S1787 - electron transport complex protein RnfD 1573 52.66 0 1726560..1727180 + 206 30063146 - S1788 - electron transport complex protein RnfG 1574 52.59 0 1727184..1727879 + 231 30063147 ydgQ S1789 - SoxR-reducing system protein RsxE 1575 48.43 0 1727879..1728514 + 211 30063148 nth S1790 - endonuclease III 1576 51.16 0 1729125..1730627 + 500 30063149 tppB S1791 - putative tripeptide transporter permease 1577 50.50 0 1730733..1731338 + 201 30063150 gst S1792 - glutathionine S-transferase 1578 52.66 0 1731382..1732245 - 287 30063151 pdxY S1793 - pyridoxamine kinase 1579 51.76 0 1732304..1733578 - 424 30063152 tyrS S1794 - tyrosyl-tRNA synthetase 1580 51.60 0 1733707..1734363 - 218 30063153 pdxH S1795 - pyridoxamine 5'-phosphate oxidase 1581 46.99 -1 1734422..1734670 - 82 30063154 ydhA S1796 - hypothetical protein 1582 55.30 0 1734692..1735597 - 301 161486481 - S1797 - insertion element IS2 transposase InsD 1583 53.28 0 1735555..1735920 - 121 161486480 - S1798 - insertion sequence 2 OrfA protein 1584 54.95 0 1736185..1737294 - 369 30063157 anmK S1799 - anhydro-N-acetylmuramic acid kinase 1585 51.28 0 1737568..1738035 + 155 30063158 slyB S1800 - putative outer membrane protein 1586 48.05 0 1738082..1738516 - 144 161486479 slyA S1801 - transcriptional regulator SlyA 1587 48.52 0 1738717..1738953 + 78 30063160 - S1802 - hypothetical protein 1588 49.83 0 1738947..1739813 + 288 30063161 - S1803 - hypothetical protein 1589 53.07 0 1741826..1742362 - 178 30063162 sodC S1805 - superoxide dismutase 1590 52.62 0 1742428..1743324 - 298 30063163 - S1806 - hypothetical protein 1591 48.68 0 1743373..1743750 - 125 30063164 - S1808 - hypothetical protein 1592 52.00 0 1743715..1744314 + 199 30063165 - S1807 - hypothetical protein 1593 53.55 0 1744351..1745448 + 365 30063166 nemA S1809 - N-ethylmaleimide reductase 1594 51.23 0 1745529..1745936 + 135 30063167 gloA S1810 - glyoxalase I 1595 54.63 0 1746039..1746686 + 215 30063168 rnt S1811 - ribonuclease T 1596 51.52 0 1751281..1752429 - 382 30063169 - S1813 - putative virulence protein 1597 52.59 0 1753036..1753383 - 115 30063170 ydhD S1814 - hypothetical protein 1598 47.95 0 1753718..1754545 + 275 30063171 ydhO S1815 - putative lipoprotein 1599 49.83 0 1754673..1755254 + 193 30063172 sodB S1816 - superoxide dismutase 1600 53.33 0 1755400..1756569 - 389 30063173 - S1817 - putative transport protein 1601 53.70 0 1757123..1758148 + 341 30063174 purR S1818 - DNA-binding transcriptional repressor PurR 1602 53.48 0 1758145..1759077 - 310 30063175 ydhB S1819 - putative DNA-binding transcriptional regulator 1603 53.55 0 1759190..1760401 + 403 30063176 ydhC S1820 - inner membrane transport protein YdhC 1604 48.22 0 1760692..1761840 + 382 30063177 cfa S1821 - cyclopropane fatty acyl phospholipid synthase 1605 47.82 0 1761880..1762521 - 213 30063178 ribE S1822 - riboflavin synthase subunit alpha 1606 52.98 0 1762736..1764109 + 457 30063179 ydhE S1823 - multidrug efflux protein 1607 51.87 0 1764150..1765406 - 418 30063180 - S1824 - hypothetical protein 1608 44.77 -1 1765979..1766284 + 101 30063181 - S1827 - hypothetical protein 1609 52.89 0 1767844..1768656 - 270 30063182 - S1829 - hypothetical protein 1610 49.36 0 1768660..1769445 - 261 30063183 ydhU S1830 - hypothetical protein 1611 49.72 0 1769442..1770161 - 239 30063184 - S1831 - putative oxidoreductase, Fe-S subunit 1612 52.43 0 1770174..1770812 - 212 30063185 - S1832 - hypothetical protein 1613 49.12 0 1772947..1773573 - 208 30063186 - S1834 - hypothetical protein 1614 46.67 -1 1774029..1774238 - 69 30063187 - S1835 - hypothetical protein 1615 52.90 0 1774325..1774600 + 91 30063188 - S1836 - IS1 orfA 1616 53.17 0 1774519..1775022 + 167 30063189 - S1837 - IS1 orfB 1617 50.04 0 1775571..1776983 + 470 30063190 pykF S1838 - pyruvate kinase 1618 50.63 0 1777294..1777530 + 78 30063191 lpp S1839 - murein lipoprotein 1619 51.54 0 1777593..1778597 - 334 30063192 ynhG S1840 - hypothetical protein 1620 49.64 0 1778746..1779162 - 138 30063193 ynhA S1841 - cysteine desufuration protein SufE 1621 55.12 0 1779175..1780395 - 406 30063194 - S1842 - selenocysteine lyase 1622 52.99 0 1780392..1781663 - 423 30063195 ynhC S1843 - cysteine desulfurase activator complex subunit SufD 1623 50.20 0 1781638..1782384 - 248 30063196 sufC S1844 - cysteine desulfurase ATPase component 1624 51.81 0 1782394..1783881 - 495 30063197 ynhE S1845 - cysteine desulfurase activator complex subunit SufB 1625 52.85 0 1783890..1784258 - 122 30063198 sufA S1846 - iron-sulfur cluster assembly scaffold protein 1626 44.44 -1 1784806..1785075 - 89 30063199 - S1847 - hypothetical protein 1627 50.85 0 1785094..1785504 - 136 30063200 - S1848 - hypothetical protein 1628 53.81 0 1785501..1788557 - 1018 30063201 ydiJ S1849 - putative oxidase 1629 54.99 0 1788946..1790058 + 370 30063202 - S1850 - putative inner membrane protein 1630 45.94 -1 1790487..1790843 + 118 30063203 - S1851 - hypothetical protein 1631 44.68 -1 1791003..1792148 + 381 30063204 - S1852 - putative transport system permease protein 1632 45.91 -1 1792442..1793602 + 386 30063205 - S1853 - putative amino acid/amine transport protein 1633 47.75 0 1793614..1794480 + 288 30063206 aroE S1854 - quinate/shikimate dehydrogenase 1634 50.99 0 1794511..1795269 + 252 30063207 aroD S1855 - 3-dehydroquinate dehydratase 1635 52.58 0 1795351..1795854 - 167 30063208 - S1857 - IS1 orfB 1636 52.54 0 1795773..1796048 - 91 30063209 - S1856 - IS1 orfA 1637 38.17 -2 1797701..1798858 + 385 30063210 - S1859 - putative enzyme 1638 45.66 -1 1800872..1803232 + 786 30063211 yddB S1861 - hypothetical protein 1639 52.78 0 1803502..1804005 - 167 30063212 - S1862 - IS1 orfB 1640 52.90 0 1803924..1804199 - 91 30063213 - S1863 - IS1 orfA 1641 52.90 0 1806810..1807085 + 91 30063214 - S1865 - IS1 orfA 1642 53.37 0 1807004..1807507 + 167 30063215 - S1866 - IS1 orfB 1643 53.89 0 1807985..1809385 + 466 30063216 gadB S1867 - glutamate decarboxylase isozyme 1644 48.31 0 1809541..1811076 + 511 30063217 xasA S1868 - acid sensitivity protein, putative transporter 1645 51.82 0 1811207..1812526 + 439 30063218 - S1869 - hypothetical protein 1646 53.51 0 1815194..1816090 + 298 30063219 - S1873 - ATP-dependent peptide transporter membrane subunit 1647 54.10 0 1816087..1817073 + 328 30063220 - S1874 - putative ATP-binding component of a transport system 1648 50.23 0 1818048..1818479 - 143 30063221 osmC S1876 - osmotically inducible protein 1649 52.78 0 1818652..1819155 - 167 30063222 - S1877 - IS1 orfB 1650 52.90 0 1819074..1819349 - 91 30063223 - S1878 - IS1 orfA 1651 51.88 0 1819537..1821234 + 565 30063224 sfcA S1879 - malate dehydrogenase 1652 52.52 0 1821368..1822378 + 336 30063225 adhP S1880 - alcohol dehydrogenase 1653 49.04 0 1822446..1822808 + 120 30063226 yddM S1881 - hypothetical protein 1654 50.15 0 1823036..1823689 - 217 30063227 fdnI S1882 - formate dehydrogenase-N subunit gamma 1655 54.92 0 1823682..1824566 - 294 30063228 fdnH S1883 - formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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