version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1520 51.17 0 1662705..1663046 + 113 30063093 - S1720 - hypothetical protein 1521 43.74 -1 1663644..1664354 - 236 161486486 ynfC S1722 - hypothetical protein 1522 55.56 0 1664462..1664767 + 101 30063095 - S1723 - hypothetical protein 1523 53.03 0 1667110..1668099 - 329 30063096 - S1727 - hypothetical protein 1524 54.67 0 1668186..1668677 - 163 30063097 - S1728 - hypothetical protein 1525 52.30 0 1668998..1669498 - 166 30063098 - S1730 - hypothetical protein 1526 51.36 0 1669488..1670003 - 171 30063099 - S1731 - hypothetical protein 1527 53.66 0 1670434..1670802 - 122 30063100 - S1732 - hypothetical protein 1528 53.75 0 1671771..1672397 - 208 30063101 - S1736 - IS911 orfB 1529 44.88 -1 1672637..1672939 - 100 30063102 - S1738 - IS911 orfA 1530 52.60 0 1673009..1673797 - 262 30063103 - S1739 - putative integrase 1531 52.75 0 1677248..1677865 + 205 30063104 - S1742 - putative oxidoreductase, Fe-S subunit 1532 52.28 0 1677867..1678721 + 284 30063105 - S1743 - putative DMSO reductase anchor subunit 1533 53.33 0 1678764..1679378 + 204 30063106 - S1744 - twin-argninine leader-binding protein DmsD 1534 54.18 0 1679573..1680829 + 418 161486485 - S1745 - putative voltage-gated ClC-type chloride channel ClcB 1535 52.01 0 1680782..1681477 - 231 30063108 bioD S1746 - putative dithiobiotin synthetase 1536 52.25 0 1681602..1682822 - 406 30063109 mlc S1747 - putative NAGC-like transcriptional regulator 1537 51.86 0 1682957..1683868 - 303 30063110 ynfL S1748 - putative LYSR-type transcriptional regulator 1538 52.10 0 1685652..1685960 + 102 161486484 asr S1750 - acid shock protein precursor 1539 51.58 0 1686236..1687057 + 273 30063112 - S1751 - hypothetical protein 1540 51.82 0 1687096..1687425 - 109 30063113 - S1752 - multidrug efflux system protein MdtI 1541 42.62 -2 1687412..1687777 - 121 30063114 - S1753 - multidrug efflux system protein MdtJ 1542 49.76 0 1688188..1689222 + 344 30063115 tqsA S1754 - putative transport protein 1543 53.06 0 1689247..1690635 - 462 30063116 pntB S1755 - pyridine nucleotide transhydrogenase 1544 52.26 0 1690646..1692193 - 515 30063117 pntA S1756 - NAD(P) transhydrogenase subunit alpha 1545 51.01 0 1692702..1693646 + 314 30063118 - S1757 - hypothetical protein 1546 53.22 0 1693832..1695214 + 460 30063119 - S1758 - putative arginine/ornithine antiporter 1547 50.90 0 1695251..1695973 + 240 30063120 ydgB S1759 - short chain dehydrogenase 1548 47.32 -1 1695970..1696305 - 111 30063121 ydgC S1760 - hypothetical protein 1549 48.52 0 1696434..1697177 + 247 30063122 rstA S1761 - DNA-binding transcriptional regulator RstA 1550 44.99 -1 1697675..1698721 + 348 30063123 - S1762 - putative transporter 1551 50.31 0 1698900..1700201 + 433 30063124 rstB S1763 - sensor protein RstB 1552 50.86 0 1700277..1701206 + 309 30063125 tus S1764 - DNA replication terminus site-binding protein 1553 53.85 0 1701203..1702606 - 467 30063126 fumC S1765 - fumarate hydratase 1554 50.52 0 1702749..1704395 - 548 30063127 fumA S1766 - fumarase A, fumarate hydratase class I; aerobic isozyme 1555 50.77 0 1704594..1705769 + 391 30063128 manA S1767 - mannose-6-phosphate isomerase 1556 48.71 0 1705870..1707345 + 491 30063129 ydgA S1768 - hypothetical protein 1557 47.24 -1 1707605..1708870 - 421 161486483 uidC S1769 - membrane-associated protein 1558 52.11 0 1709940..1711643 - 567 30063131 uidA S1771 - beta-D-glucuronidase 1559 50.25 0 1712031..1712621 - 196 30063132 uidR S1772 - repressor for uid operon 1560 52.58 0 1713026..1713529 - 167 30063133 - S1774 - IS1 orfB 1561 52.90 0 1713448..1713723 - 91 30063134 - S1775 - IS1 orfA 1562 54.42 0 1714506..1715534 - 342 30063135 malI S1777 - DNA-binding transcriptional repressor MalI 1563 52.79 0 1715709..1717301 + 530 30063136 malX S1778 - bifunctional maltose and glucose-specific PTS system components IICB 1564 51.24 0 1717311..1718483 + 390 30063137 malY S1779 - cystathionine beta-lyase; maltose regulon modulator 1565 53.49 0 1718587..1719588 + 333 30063138 add S1780 - adenosine deaminase 1566 53.89 0 1719624..1720664 - 346 161486482 - S1781 - putative oxidoreductase 1567 47.22 -1 1721305..1721520 + 71 30063140 - S1782 - oriC-binding nucleoid-associated protein 1568 48.75 0 1721606..1722046 + 146 30063141 - S1783 - hypothetical protein 1569 51.37 0 1722123..1722704 + 193 30063142 - S1784 - Na(+)-translocating NADH-quinone reductase subunit E 1570 54.40 0 1722704..1723282 + 192 30063143 - S1785 - electron transport complex protein RnfB 1571 55.06 0 1723275..1725497 + 740 30063144 - S1786 - electron transport complex protein RnfC 1572 53.07 0 1725498..1726556 + 352 30063145 rnfD S1787 - electron transport complex protein RnfD 1573 52.66 0 1726560..1727180 + 206 30063146 - S1788 - electron transport complex protein RnfG 1574 52.59 0 1727184..1727879 + 231 30063147 ydgQ S1789 - SoxR-reducing system protein RsxE 1575 48.43 0 1727879..1728514 + 211 30063148 nth S1790 - endonuclease III 1576 51.16 0 1729125..1730627 + 500 30063149 tppB S1791 - putative tripeptide transporter permease 1577 50.50 0 1730733..1731338 + 201 30063150 gst S1792 - glutathionine S-transferase 1578 52.66 0 1731382..1732245 - 287 30063151 pdxY S1793 - pyridoxamine kinase 1579 51.76 0 1732304..1733578 - 424 30063152 tyrS S1794 - tyrosyl-tRNA synthetase 1580 51.60 0 1733707..1734363 - 218 30063153 pdxH S1795 - pyridoxamine 5'-phosphate oxidase 1581 46.99 -1 1734422..1734670 - 82 30063154 ydhA S1796 - hypothetical protein 1582 55.30 0 1734692..1735597 - 301 161486481 - S1797 - insertion element IS2 transposase InsD 1583 53.28 0 1735555..1735920 - 121 161486480 - S1798 - insertion sequence 2 OrfA protein 1584 54.95 0 1736185..1737294 - 369 30063157 anmK S1799 - anhydro-N-acetylmuramic acid kinase 1585 51.28 0 1737568..1738035 + 155 30063158 slyB S1800 - putative outer membrane protein 1586 48.05 0 1738082..1738516 - 144 161486479 slyA S1801 - transcriptional regulator SlyA 1587 48.52 0 1738717..1738953 + 78 30063160 - S1802 - hypothetical protein 1588 49.83 0 1738947..1739813 + 288 30063161 - S1803 - hypothetical protein 1589 53.07 0 1741826..1742362 - 178 30063162 sodC S1805 - superoxide dismutase 1590 52.62 0 1742428..1743324 - 298 30063163 - S1806 - hypothetical protein 1591 48.68 0 1743373..1743750 - 125 30063164 - S1808 - hypothetical protein 1592 52.00 0 1743715..1744314 + 199 30063165 - S1807 - hypothetical protein 1593 53.55 0 1744351..1745448 + 365 30063166 nemA S1809 - N-ethylmaleimide reductase 1594 51.23 0 1745529..1745936 + 135 30063167 gloA S1810 - glyoxalase I 1595 54.63 0 1746039..1746686 + 215 30063168 rnt S1811 - ribonuclease T 1596 51.52 0 1751281..1752429 - 382 30063169 - S1813 - putative virulence protein 1597 52.59 0 1753036..1753383 - 115 30063170 ydhD S1814 - hypothetical protein 1598 47.95 0 1753718..1754545 + 275 30063171 ydhO S1815 - putative lipoprotein 1599 49.83 0 1754673..1755254 + 193 30063172 sodB S1816 - superoxide dismutase 1600 53.33 0 1755400..1756569 - 389 30063173 - S1817 - putative transport protein 1601 53.70 0 1757123..1758148 + 341 30063174 purR S1818 - DNA-binding transcriptional repressor PurR 1602 53.48 0 1758145..1759077 - 310 30063175 ydhB S1819 - putative DNA-binding transcriptional regulator 1603 53.55 0 1759190..1760401 + 403 30063176 ydhC S1820 - inner membrane transport protein YdhC 1604 48.22 0 1760692..1761840 + 382 30063177 cfa S1821 - cyclopropane fatty acyl phospholipid synthase 1605 47.82 0 1761880..1762521 - 213 30063178 ribE S1822 - riboflavin synthase subunit alpha 1606 52.98 0 1762736..1764109 + 457 30063179 ydhE S1823 - multidrug efflux protein 1607 51.87 0 1764150..1765406 - 418 30063180 - S1824 - hypothetical protein 1608 44.77 -1 1765979..1766284 + 101 30063181 - S1827 - hypothetical protein 1609 52.89 0 1767844..1768656 - 270 30063182 - S1829 - hypothetical protein 1610 49.36 0 1768660..1769445 - 261 30063183 ydhU S1830 - hypothetical protein 1611 49.72 0 1769442..1770161 - 239 30063184 - S1831 - putative oxidoreductase, Fe-S subunit 1612 52.43 0 1770174..1770812 - 212 30063185 - S1832 - hypothetical protein 1613 49.12 0 1772947..1773573 - 208 30063186 - S1834 - hypothetical protein 1614 46.67 -1 1774029..1774238 - 69 30063187 - S1835 - hypothetical protein 1615 52.90 0 1774325..1774600 + 91 30063188 - S1836 - IS1 orfA 1616 53.17 0 1774519..1775022 + 167 30063189 - S1837 - IS1 orfB 1617 50.04 0 1775571..1776983 + 470 30063190 pykF S1838 - pyruvate kinase 1618 50.63 0 1777294..1777530 + 78 30063191 lpp S1839 - murein lipoprotein 1619 51.54 0 1777593..1778597 - 334 30063192 ynhG S1840 - hypothetical protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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