version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1444 48.18 0 1585635..1585991 + 118 30063017 rplT S1633 - 50S ribosomal protein L20 1445 35.56 -2 1586114..1586158 + 14 30063018 pheM S4806 - phenylalanyl-tRNA synthetase (pheST) operon leader peptide 1446 53.96 0 1586441..1587424 + 327 30063019 pheS S1634 - phenylalanyl-tRNA synthetase subunit alpha 1447 53.98 0 1587439..1589826 + 795 30063020 pheT S1635 - phenylalanyl-tRNA synthetase subunit beta 1448 50.00 0 1589831..1590130 + 99 30063021 ihfA S1636 - integration host factor subunit alpha 1449 55.25 0 1590231..1591211 + 326 30063022 btuC S1637 - vtamin B12-transporter permease 1450 49.28 0 1591274..1591825 + 183 30063023 btuE S1638 - putative glutathione peroxidase 1451 55.07 0 1591825..1592574 + 249 30063024 btuD S1639 - vitamin B12-transporter ATPase 1452 49.03 0 1592652..1593116 + 154 30063025 nlpC S1640 - lipoprotein 1453 42.58 -2 1593363..1594076 + 237 30063026 - S1641 - hypothetical protein 1454 52.12 0 1594140..1595576 + 478 30063027 - S1642 - hypothetical protein 1455 50.52 0 1595580..1595771 - 63 30063028 ydiE S1643 - hypothetical protein 1456 52.91 0 1595903..1596949 - 348 30063029 aroH S1644 - phospho-2-dehydro-3-deoxyheptonate aldolase 1457 51.08 0 1597106..1597939 - 277 30063030 ydiA S1645 - hypothetical protein 1458 54.90 0 1598272..1600650 + 792 30063031 ppsA S1646 - phosphoenolpyruvate synthase 1459 49.68 0 1600707..1602407 - 566 30063032 ydiD S1647 - short chain acyl-CoA synthetase 1460 47.96 0 1602410..1602703 - 97 30063033 ydiT S1648 - hypothetical protein 1461 54.50 0 1602700..1603989 - 429 30063034 ydiS S1649 - hypothetical protein 1462 53.14 0 1604045..1604983 - 312 30063035 ydiR S1650 - electron transfer flavoprotein subunit YdiR 1463 51.50 0 1605003..1605767 - 254 30063036 ydiQ S1651 - putative electron transfer flavoprotein YdiQ 1464 46.11 -1 1606086..1606586 + 166 30063037 - S1652 - putative ARAC-type regulatory protein 1465 51.70 0 1607022..1607315 + 97 30063038 - S1653 - IS1 1466 39.50 -2 1607878..1608639 - 253 30063039 - S1654 - transcriptional regulator YdeO 1467 35.29 -2 1608707..1608910 - 67 30063040 - S1655 - hypothetical protein 1468 50.18 0 1609158..1611437 - 759 30063041 - S1656 - putative oxidoreductase 1469 52.90 0 1612576..1612851 + 91 30063042 - S1658 - IS1 orfA 1470 52.58 0 1612770..1613273 + 167 30063043 - S1659 - IS1 orfB 1471 52.24 0 1613481..1614194 + 237 30063044 - S1660 - IS600 orfB 1472 55.00 0 1614219..1614398 - 59 30063045 - S1661 - putative lysis protein S of prophage CP-933V 1473 52.94 0 1614706..1614909 - 67 30063046 - S4818 - hypothetical protein 1474 52.38 0 1617635..1617991 - 118 30063047 rus S1665 - endodeoxyribonuclease RUS (Holliday junction resolvase) 1475 39.76 -2 1619400..1619648 - 82 30063048 rem S1667 - hypothetical protein 1476 51.92 0 1619869..1620024 - 51 30063049 relF S1668 - prophage maintenance protein 1477 46.88 -1 1620096..1620383 - 95 30063050 relE S1669 - hypothetical protein 1478 47.08 -1 1620383..1620622 - 79 30063051 relB S1670 - bifunctional antitoxin/transcriptional repressor RelB 1479 53.43 0 1620682..1621308 - 208 30063052 b4285 S1671 - IS911 orfB 1480 44.88 -1 1621548..1621850 - 100 30063053 - S1673 - IS911 orfA 1481 52.10 0 1622201..1622914 - 237 30063054 - S1675 - IS600 orfB 1482 46.20 -1 1623055..1623357 - 100 30063055 - S1676 - IS600 orfA 1483 50.03 0 1624527..1625987 + 486 30063056 ydfI S1678 - putative oxidoreductase 1484 51.96 0 1626023..1626226 - 67 30063057 - S1679 - hypothetical protein 1485 50.22 0 1626404..1627090 - 228 30063058 ydfH S1680 - hypothetical protein 1486 51.27 0 1627179..1627925 - 248 30063059 ydfG S1681 - 3-hydroxy acid dehydrogenase 1487 50.00 0 1628062..1630107 + 681 30063060 dcp S1682 - dipeptidyl carboxypeptidase II 1488 49.90 0 1630152..1630670 - 172 30063061 ydeJ S1683 - competence damage-inducible protein A 1489 45.73 -1 1630946..1631179 + 77 30063062 ydeI S1684 - hypothetical protein 1490 46.20 -1 1631236..1631538 + 100 30063063 - S1685 - IS600 1491 52.24 0 1631679..1632392 + 237 30063064 - S1686 - IS600 1492 49.51 0 1632862..1633980 - 372 30063065 ydeF S1687 - putative transport protein 1493 50.00 0 1634244..1635143 + 299 161486492 ydeD S1688 - O-acetylserine/cysteine export protein 1494 49.32 0 1635174..1635392 - 72 30063067 marB S1689 - hypothetical protein 1495 45.83 -1 1635424..1635807 - 127 30063068 marA S1690 - DNA-binding transcriptional activator MarA 1496 48.51 0 1635827..1636261 - 144 161486491 marR S1691 - DNA-binding transcriptional repressor MarR 1497 51.05 0 1636473..1637138 + 221 30063070 ydeB S1692 - multiple drug resistance protein MarC 1498 51.30 0 1637163..1638353 - 396 30063071 ydeA S1693 - sugar efflux transporter 1499 40.14 -2 1638503..1639618 - 371 30063072 - S1694 - hypothetical protein 1500 51.78 0 1640697..1641623 + 308 30063073 yneH S1696 - glutaminase 1501 53.04 0 1641623..1641967 + 114 30063074 - S1697 - hypothetical protein 1502 50.42 0 1642592..1643539 + 315 30063075 - S1698 - hypothetical protein 1503 52.13 0 1643766..1645217 + 483 30063076 uxaB S1699 - altronate oxidoreductase 1504 47.72 0 1647060..1648025 + 321 30063077 - S1701 - hypothetical protein 1505 54.68 0 1648029..1648787 - 252 30063078 - S1702 - trans-aconitate 2-methyltransferase 1506 45.02 -1 1648827..1649117 - 96 30063079 - S1703 - autoinducer-2 (AI-2) modifying protein LsrG 1507 50.57 0 1649141..1649923 - 260 30063080 - S1704 - aldolase 1508 55.30 0 1649936..1650841 - 301 161486490 - S1705 - insertion element IS2 transposase InsD 1509 53.01 0 1650799..1651164 - 121 161486489 - S1706 - insertion sequence 2 OrfA protein 1510 51.15 0 1652321..1653274 - 317 30063083 ydeW S1708 - sorC family transcriptional regulator 1511 53.19 0 1653523..1655058 + 511 30063084 - S1709 - putative ATP-binding component of a transport system 1512 53.84 0 1655052..1656080 + 342 30063085 ydeY S1710 - putative transport system permease protein 1513 53.58 0 1656080..1657072 + 330 30063086 ydeZ S1711 - putative transport system permease protein 1514 53.01 0 1658322..1658687 + 121 161486488 - S1714 - insertion sequence 2 OrfA protein 1515 55.30 0 1658645..1659550 + 301 161486487 - S1715 - insertion element IS2 transposase InsD 1516 50.55 0 1659600..1660412 - 270 30063089 - S1716 - ISEhe3 orfB 1517 49.10 0 1660469..1660747 - 92 30063090 - S1717 - ISEhe3 orfA 1518 50.78 0 1660824..1662038 - 404 30063091 rspA S1718 - starvation sensing protein 1519 50.76 0 1662244..1662570 - 108 30063092 - S1719 - hypothetical protein 1520 51.17 0 1662705..1663046 + 113 30063093 - S1720 - hypothetical protein 1521 43.74 -1 1663644..1664354 - 236 161486486 ynfC S1722 - hypothetical protein 1522 55.56 0 1664462..1664767 + 101 30063095 - S1723 - hypothetical protein 1523 53.03 0 1667110..1668099 - 329 30063096 - S1727 - hypothetical protein 1524 54.67 0 1668186..1668677 - 163 30063097 - S1728 - hypothetical protein 1525 52.30 0 1668998..1669498 - 166 30063098 - S1730 - hypothetical protein 1526 51.36 0 1669488..1670003 - 171 30063099 - S1731 - hypothetical protein 1527 53.66 0 1670434..1670802 - 122 30063100 - S1732 - hypothetical protein 1528 53.75 0 1671771..1672397 - 208 30063101 - S1736 - IS911 orfB 1529 44.88 -1 1672637..1672939 - 100 30063102 - S1738 - IS911 orfA 1530 52.60 0 1673009..1673797 - 262 30063103 - S1739 - putative integrase 1531 52.75 0 1677248..1677865 + 205 30063104 - S1742 - putative oxidoreductase, Fe-S subunit 1532 52.28 0 1677867..1678721 + 284 30063105 - S1743 - putative DMSO reductase anchor subunit 1533 53.33 0 1678764..1679378 + 204 30063106 - S1744 - twin-argninine leader-binding protein DmsD 1534 54.18 0 1679573..1680829 + 418 161486485 - S1745 - putative voltage-gated ClC-type chloride channel ClcB 1535 52.01 0 1680782..1681477 - 231 30063108 bioD S1746 - putative dithiobiotin synthetase 1536 52.25 0 1681602..1682822 - 406 30063109 mlc S1747 - putative NAGC-like transcriptional regulator 1537 51.86 0 1682957..1683868 - 303 30063110 ynfL S1748 - putative LYSR-type transcriptional regulator 1538 52.10 0 1685652..1685960 + 102 161486484 asr S1750 - acid shock protein precursor 1539 51.58 0 1686236..1687057 + 273 30063112 - S1751 - hypothetical protein 1540 51.82 0 1687096..1687425 - 109 30063113 - S1752 - multidrug efflux system protein MdtI 1541 42.62 -2 1687412..1687777 - 121 30063114 - S1753 - multidrug efflux system protein MdtJ 1542 49.76 0 1688188..1689222 + 344 30063115 tqsA S1754 - putative transport protein 1543 53.06 0 1689247..1690635 - 462 30063116 pntB S1755 - pyridine nucleotide transhydrogenase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0