version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1357 53.90 0 1485639..1487189 + 516 30062930 yoaE S1527 - putative transport protein 1358 50.09 0 1487193..1488791 - 532 30062931 - S1528 - hypothetical protein 1359 53.77 0 1488922..1490286 - 454 30062932 sdaA S1529 - L-serine deaminase 1360 54.75 0 1490470..1491048 - 192 30062933 yeaB S1530 - hypothetical protein 1361 50.73 0 1491052..1492413 - 453 30062934 pabB S1531 - para-aminobenzoate synthase component I 1362 54.44 0 1492487..1492666 + 59 30062935 - S1532 - hypothetical protein 1363 41.94 -2 1492786..1493145 - 119 30062936 - S1533 - hypothetical protein 1364 50.64 0 1493507..1493899 - 130 30062937 - S1534 - hypothetical protein 1365 54.95 0 1493983..1495893 + 636 30062938 - S1535 - putative enzyme 1366 55.89 +1 1495951..1496646 + 231 30062939 yeaZ S1536 - hypothetical protein 1367 53.95 0 1496686..1497267 + 193 30062940 - S1537 - putative outer membrane protein 1368 51.20 0 1497407..1499158 + 583 30062941 fadD S1538 - long-chain-fatty-acid--CoA ligase 1369 54.30 0 1499240..1500355 + 371 30062942 rnd S1539 - ribonuclease D 1370 50.21 0 1500409..1501374 - 321 30062943 yeaX S1540 - putative diogenase beta subunit 1371 41.27 -2 1502389..1502955 - 188 30062944 - S1542 - putative repressor protein 1372 46.20 -1 1503322..1503624 + 100 30062945 - S1543 - IS600 orfA 1373 52.10 0 1503765..1504478 + 237 30062946 - S1544 - IS600 orfB 1374 47.86 0 1505400..1506425 - 341 30062947 yeaP S1545 - hypothetical protein 1375 52.55 0 1506608..1506862 + 84 30062948 yoaF S1546 - hypothetical protein 1376 53.39 0 1506884..1507252 - 122 30062949 yeaO S1547 - hypothetical protein 1377 53.39 0 1507405..1508466 - 353 30062950 yeaN S1548 - putative amino acid/amine transport protein 1378 54.81 0 1509337..1509783 - 148 30062951 yeaL S1550 - hypothetical protein 1379 45.10 -1 1509905..1510057 + 50 30062952 - S1551 - hypothetical protein 1380 50.79 0 1510058..1510561 - 167 30062953 yeaK S1552 - hypothetical protein 1381 52.10 0 1512189..1512902 + 237 30062954 - S1554 - IS600 orfB 1382 50.36 0 1512927..1514306 - 459 30062955 yeaG S1555 - hypothetical protein 1383 52.07 0 1514742..1515488 + 248 30062956 yeaF S1556 - hypothetical protein 1384 50.39 0 1515578..1516339 + 253 30062957 - S1557 - putative aldehyde reductase 1385 50.73 0 1516390..1517274 - 294 30062958 yeaD S1558 - hypothetical protein 1386 50.20 0 1517358..1518353 - 331 30062959 gapA S1559 - glyceraldehyde-3-phosphate dehydrogenase 1387 47.83 0 1518695..1519108 + 137 30062960 yeaA S1560 - methionine sulfoxide reductase B 1388 45.42 -1 1519150..1519422 + 90 30062961 - S1561 - hypothetical protein 1389 49.86 0 1519792..1520868 + 358 30062962 - S1562 - putative oxidoreductase 1390 49.06 0 1520895..1522274 + 459 30062963 - S1563 - putative transport protein 1391 44.56 -1 1523357..1524193 + 278 30062964 - S1565 - putative aldolase 1392 45.04 -1 1524198..1525145 + 315 30062965 - S1566 - putative kinase 1393 47.76 0 1525200..1526135 + 311 30062966 - S1567 - hypothetical protein 1394 42.42 -2 1526272..1527030 + 252 30062967 - S1568 - putative DEOR-type transcriptional regulator 1395 45.25 -1 1527148..1528506 + 452 30062968 ydjE S1569 - putative transport protein 1396 53.43 0 1528599..1529240 - 213 161486495 ydjB S1570 - nicotinamidase/pyrazinamidase 1397 50.84 0 1529251..1530267 - 338 30062970 ansA S1571 - cytoplasmic asparaginase I 1398 51.97 0 1530434..1532290 - 618 30062971 sppA S1572 - protease 4 1399 55.25 0 1532451..1533002 + 183 30062972 ydjA S1573 - hypothetical protein 1400 55.27 0 1533119..1534162 + 347 30062973 selD S1574 - selenophosphate synthetase 1401 55.35 0 1534167..1536128 + 653 30062974 topB S1575 - DNA topoisomerase III 1402 53.28 0 1538704..1539069 + 121 161486494 - S1578 - insertion sequence 2 OrfA protein 1403 55.30 0 1539027..1539932 + 301 161486493 - S1579 - insertion element IS2 transposase InsD 1404 50.55 0 1540327..1540599 + 90 30062977 - S1580 - hypothetical protein 1405 53.92 0 1540565..1540972 - 135 30062978 - S1581 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1406 53.62 0 1541059..1541679 + 206 30062979 - S1582 - putative cytochrome oxidase 1407 51.68 0 1543062..1543715 - 217 30062980 - S1584 - putative ATP-binding component of a transport system 1408 54.33 0 1546096..1547424 + 442 30062981 - S1588 - IS4 orf 1409 56.65 +1 1547774..1548322 - 182 30062982 ynjA S1590 - hypothetical protein 1410 51.35 0 1548322..1549026 - 234 30062983 ydjZ S1591 - hypothetical protein 1411 49.52 0 1549044..1549883 - 279 30062984 ydjY S1592 - hypothetical protein 1412 48.52 0 1549726..1550436 - 236 30062985 ydjX S1593 - hypothetical protein 1413 53.28 0 1550603..1551409 - 268 30062986 xthA S1594 - exonuclease III 1414 56.20 +1 1553075..1554106 + 343 30062987 - S1596 - arginine succinyltransferase 1415 58.15 +1 1554103..1555581 + 492 30062988 astD S1597 - succinylglutamic semialdehyde dehydrogenase 1416 53.46 0 1556904..1557872 + 322 30062989 ydjS S1599 - succinylglutamate desuccinylase 1417 50.82 0 1558202..1558687 + 161 30062990 spy S1600 - periplasmic protein 1418 51.74 0 1558890..1559465 + 191 30062991 - S1601 - hypothetical protein 1419 51.13 0 1559425..1560312 - 295 30062992 - S1602 - nucleotide excision repair endonuclease 1420 48.79 0 1560542..1561369 - 275 30062993 nadE S1603 - NAD synthetase 1421 49.26 0 1561571..1561909 + 112 30062994 osmE S1604 - DNA-binding transcriptional activator OsmE 1422 43.61 -1 1562208..1562528 + 106 30062995 celA S1605 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB 1423 48.15 0 1564020..1564370 + 116 30062996 celC S1607 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA 1424 52.98 0 1565070..1565573 - 167 30062997 - S1609 - IS1 orfB 1425 52.90 0 1565492..1565767 - 91 30062998 - S1610 - IS1 orfA 1426 46.56 -1 1566102..1567454 + 450 30062999 celF S1611 - cryptic phospho-beta-glucosidase; cryptic 1427 50.33 0 1567467..1568225 + 252 30063000 ydjC S1612 - hypothetical protein 1428 51.55 0 1568272..1570533 - 753 30063001 katE S1613 - hydroperoxidase II 1429 51.52 0 1570716..1570979 + 87 30063002 - S1614 - cell division modulator 1430 53.17 0 1572008..1572511 - 167 30063003 - S1616 - IS1 orfB 1431 52.90 0 1572430..1572705 - 91 30063004 - S1617 - IS1 orfA 1432 51.27 0 1574375..1574965 - 196 30063005 - S1619 - hypothetical protein 1433 51.42 0 1575128..1575796 - 222 30063006 yniC S1620 - 2-deoxyglucose-6-phosphatase 1434 43.95 -1 1575943..1576479 + 178 30063007 - S1621 - hypothetical protein 1435 51.92 0 1576520..1577380 - 286 30063008 - S1622 - hypothetical protein 1436 43.64 -1 1577486..1577776 - 96 30063009 - S1623 - hypothetical protein 1437 54.19 0 1577877..1578806 - 309 30063010 pfkB S1624 - 6-phosphofructokinase 2 1438 49.86 0 1579126..1579851 + 241 30063011 - S1625 - hypothetical protein 1439 52.98 0 1581158..1581661 - 167 30063012 - S1627 - IS1 orfB 1440 52.54 0 1581580..1581855 - 91 30063013 - S1628 - IS1 orfA 1441 49.82 0 1582814..1584742 + 642 30063014 thrS S1630 - threonyl-tRNA synthetase 1442 47.36 -1 1584854..1585288 + 144 30063015 infC S1631 - translation initiation factor IF-3 1443 49.49 0 1585385..1585582 + 65 30063016 rpmI S1632 - 50S ribosomal protein L35 1444 48.18 0 1585635..1585991 + 118 30063017 rplT S1633 - 50S ribosomal protein L20 1445 35.56 -2 1586114..1586158 + 14 30063018 pheM S4806 - phenylalanyl-tRNA synthetase (pheST) operon leader peptide 1446 53.96 0 1586441..1587424 + 327 30063019 pheS S1634 - phenylalanyl-tRNA synthetase subunit alpha 1447 53.98 0 1587439..1589826 + 795 30063020 pheT S1635 - phenylalanyl-tRNA synthetase subunit beta 1448 50.00 0 1589831..1590130 + 99 30063021 ihfA S1636 - integration host factor subunit alpha 1449 55.25 0 1590231..1591211 + 326 30063022 btuC S1637 - vtamin B12-transporter permease 1450 49.28 0 1591274..1591825 + 183 30063023 btuE S1638 - putative glutathione peroxidase 1451 55.07 0 1591825..1592574 + 249 30063024 btuD S1639 - vitamin B12-transporter ATPase 1452 49.03 0 1592652..1593116 + 154 30063025 nlpC S1640 - lipoprotein 1453 42.58 -2 1593363..1594076 + 237 30063026 - S1641 - hypothetical protein 1454 52.12 0 1594140..1595576 + 478 30063027 - S1642 - hypothetical protein 1455 50.52 0 1595580..1595771 - 63 30063028 ydiE S1643 - hypothetical protein 1456 52.91 0 1595903..1596949 - 348 30063029 aroH S1644 - phospho-2-dehydro-3-deoxyheptonate aldolase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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