version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 986 48.10 0 1077989..1078726 + 245 30062559 ycdX S1101 - putative hydrolase 987 53.69 0 1078750..1079304 + 184 30062560 ycdY S1102 - putative oxidoreductase component 988 54.21 0 1079376..1079897 + 173 30062561 ycdZ S1103 - hypothetical protein 989 41.97 -2 1080763..1081179 - 138 30062562 csgF S1105 - curli assembly protein CsgF 990 42.82 -2 1081204..1081593 - 129 30062563 csgE S1106 - curli assembly protein CsgE 991 41.47 -2 1081598..1082248 - 216 30062564 csgD S1107 - DNA-binding transcriptional regulator CsgD 992 42.11 -2 1083002..1083457 + 151 30062565 csgB S1108 - curlin minor subunit 993 46.20 -1 1083671..1083973 + 100 30062566 - S1110 - IS600 994 52.90 0 1084114..1084752 + 212 30062567 - S1111 - IS600 ORF2 995 42.94 -2 1085157..1085489 + 110 30062568 csgC S1113 - putative autoagglutination protein 996 44.23 -1 1085610..1085921 + 103 30062569 - S1114 - hypothetical protein 997 51.69 0 1086016..1086549 + 177 30062570 - S1115 - hypothetical protein 998 50.54 0 1086491..1087972 + 493 30062571 ymdC S1116 - putative synthase 999 43.70 -1 1087980..1089137 - 385 30062572 mdoC S1117 - glucans biosynthesis protein 1000 49.54 0 1089531..1091066 + 511 30062573 mdoG S1118 - glucan biosynthesis protein G 1001 54.68 0 1091059..1093602 + 847 30062574 mdoH S1119 - glucosyltransferase MdoH 1002 53.41 0 1094152..1095207 - 351 30062575 - S1120 - IS91 orf 1003 51.06 0 1095207..1095629 - 140 30062576 - S4816 - hypothetical protein 1004 41.69 -2 1095591..1096931 + 446 30062577 - S4815 - hypothetical protein 1005 38.83 -2 1096928..1097200 + 90 30062578 - S4817 - hypothetical protein 1006 54.43 0 1097304..1097924 - 206 30062579 - S1123 - IS629 orfB 1007 54.74 0 1098187..1098513 - 108 30062580 - S1124 - IS629 orfA 1008 44.88 -1 1098945..1099247 + 100 30062581 - S1126 - IS911 orfA 1009 54.42 0 1099436..1100113 + 225 30062582 - S1127 - IS911 orfB 1010 42.55 -2 1100131..1100553 - 140 30062583 - S1128 - hypothetical protein 1011 53.01 0 1100686..1101051 + 121 161486512 - S1129 - insertion sequence 2 OrfA protein 1012 55.30 0 1101009..1101914 + 301 161486511 - S1130 - insertion element IS2 transposase InsD 1013 54.43 0 1102310..1102636 + 108 30062586 - S1131 - IS629 orfA 1014 54.63 0 1102872..1103519 + 215 30062587 - S1132 - IS629 orfB 1015 46.86 -1 1103807..1104109 + 100 30062588 - S1133 - IS600 orfA 1016 55.62 0 1104250..1104729 + 159 30062589 - S1134 - IS600 orfB 1017 46.22 -1 1104738..1104962 + 74 30062590 - S1135 - IS600 orfB 1018 43.62 -1 1104987..1105919 - 310 30062591 - S1136 - hypothetical protein 1019 52.88 0 1106312..1107232 - 306 30062592 htrB S1138 - lipid A biosynthesis lauroyl acyltransferase 1020 49.67 0 1107457..1108509 + 350 30062593 yceA S1139 - hypothetical protein 1021 46.70 -1 1108551..1109126 - 191 30062594 yceI S1140 - hypothetical protein 1022 50.97 0 1109130..1109696 - 188 30062595 - S1141 - putative cytochrome 1023 37.72 -2 1109957..1110070 - 37 30062596 yceO S1142 - hypothetical protein 1024 52.46 0 1110118..1111236 - 372 30062597 solA S1143 - N-methyltryptophan oxidase 1025 45.49 -1 1111351..1111605 - 84 161486510 bssS S1144 - biofilm formation regulatory protein BssS 1026 47.97 0 1111895..1112140 - 81 30062599 dinI S1145 - DNA damage-inducible protein I 1027 53.10 0 1112214..1113260 - 348 30062600 pyrC S1146 - dihydroorotase 1028 46.88 -1 1113366..1113926 - 186 30062601 yceB S1147 - hypothetical protein 1029 48.77 0 1114060..1114707 - 215 30062602 grxB S1148 - glutaredoxin 2 1030 55.33 0 1114771..1115979 - 402 30062603 yceL S1149 - multidrug resistance protein MdtH 1031 49.57 0 1116215..1116799 + 194 30062604 rimJ S1150 - ribosomal-protein-S5-alanine N-acetyltransferase 1032 51.70 0 1116810..1117457 + 215 30062605 yceH S1151 - hypothetical protein 1033 54.92 0 1117459..1118292 + 277 30062606 mviM S1152 - putative virulence factor 1034 53.45 0 1118492..1120027 + 511 30062607 mviN S1153 - putative virulence factor 1035 47.96 0 1120067..1120483 - 138 30062608 flgN S1154 - flagella synthesis protein FlgN 1036 53.06 0 1120488..1120781 - 97 30062609 flgM S1155 - anti-sigma28 factor FlgM 1037 52.12 0 1120857..1121516 - 219 30062610 flgA S1156 - flagellar basal body P-ring biosynthesis protein FlgA 1038 53.96 0 1121671..1122087 + 138 30062611 flgB S1157 - flagellar basal body rod protein FlgB 1039 54.45 0 1122506..1123201 + 231 30062612 flgD S1159 - flagellar basal body rod modification protein 1040 51.36 0 1123226..1124434 + 402 30062613 flgE S1160 - flagellar hook protein FlgE 1041 53.38 0 1125343..1126125 + 260 30062614 flgG S1162 - flagellar basal body rod protein FlgG 1042 53.51 0 1126178..1126876 + 232 30062615 flgH S1163 - flagellar basal body L-ring protein 1043 53.37 0 1126888..1127985 + 365 30062616 flgI S1164 - flagellar basal body P-ring protein 1044 53.93 0 1127985..1128926 + 313 30062617 flgJ S1165 - peptidoglycan hydrolase 1045 55.73 +1 1131785..1134976 - 1063 161486509 rne S1168 - ribonuclease E 1046 46.40 -1 1135057..1135431 + 124 30062619 - S1169 - hypothetical protein 1047 51.56 0 1135549..1136508 + 319 30062620 yceC S1170 - 23S rRNA pseudouridylate synthase C 1048 49.74 0 1136620..1137204 - 194 161486508 maf S1171 - Maf-like protein 1049 49.43 0 1137403..1137924 + 173 30062622 yceD S1172 - hypothetical protein 1050 54.02 0 1137976..1138149 + 57 30062623 rpmF S1173 - 50S ribosomal protein L32 1051 51.91 0 1138230..1139300 + 356 161486507 plsX S1174 - putative glycerol-3-phosphate acyltransferase PlsX 1052 54.40 0 1139368..1140321 + 317 30062625 fabH S1175 - 3-oxoacyl-(acyl carrier protein) synthase III 1053 55.05 0 1140337..1141266 + 309 30062626 fabD S1176 - acyl carrier protein S-malonyltransferase 1054 51.43 0 1141279..1142013 + 244 30062627 fabG S1177 - 3-ketoacyl-(acyl-carrier-protein) reductase 1055 48.10 0 1142224..1142460 + 78 30062628 acpP S1178 - acyl carrier protein 1056 53.30 0 1142547..1143788 + 413 30062629 fabF S1179 - 3-oxoacyl-(acyl carrier protein) synthase II 1057 50.62 0 1143908..1144717 + 269 30062630 pabC S1180 - 4-amino-4-deoxychorismate lyase 1058 50.54 0 1144720..1145742 + 340 30062631 yceG S1181 - hypothetical protein 1059 53.74 0 1145732..1146373 + 213 30062632 tdk S1182 - thymidylate kinase 1060 54.23 0 1146370..1147374 + 334 30062633 holB S1183 - DNA polymerase III subunit delta' 1061 50.50 0 1147385..1148182 + 265 30062634 ycfH S1184 - putative metallodependent hydrolase 1062 52.09 0 1148477..1149910 + 477 30062635 ptsG S1185 - glucose-specific PTS system IIBC components 1063 50.28 0 1152494..1152853 + 119 30062636 ycfF S1187 - purine nucleoside phosphoramidase 1064 49.47 0 1152856..1153233 + 125 30062637 ycfL S1188 - hypothetical protein 1065 56.54 +1 1153248..1153889 + 213 30062638 ycfM S1189 - hypothetical protein 1066 52.73 0 1153870..1154694 + 274 30062639 thiK S1190 - thiamine kinase 1067 53.02 0 1154705..1155730 + 341 30062640 ycfO S1191 - beta-hexosaminidase 1068 46.22 -1 1155753..1156295 + 180 30062641 ycfP S1192 - hypothetical protein 1069 52.34 0 1156703..1158007 + 434 30062642 ndh S1193 - respiratory NADH dehydrogenase 1070 53.15 0 1158234..1158773 + 179 30062643 ycfJ S1194 - hypothetical protein 1071 49.79 0 1158835..1159545 - 236 30062644 ycfQ S1195 - hypothetical protein 1072 47.42 -1 1159752..1159964 + 70 30062645 ycfR S1196 - hypothetical protein 1073 53.17 0 1160047..1161009 - 320 30062646 ycfS S1197 - hypothetical protein 1074 54.86 0 1161152..1164598 - 1148 30062647 mfd S1198 - transcription-repair coupling factor 1075 49.26 0 1164726..1165799 - 357 30062648 ycfT S1199 - hypothetical protein 1076 54.58 0 1166061..1167260 + 399 30062649 ycfU S1200 - outer membrane-specific lipoprotein transporter subunit LolC 1077 54.56 0 1167253..1167954 + 233 30062650 lolD S1201 - lipoprotein transporter ATP-binding subunit 1078 51.49 0 1167954..1169198 + 414 30062651 ycfW S1202 - outer membrane-specific lipoprotein transporter subunit LolE 1079 52.41 0 1169227..1170138 + 303 30062652 ycfX S1203 - N-acetyl-D-glucosamine kinase 1080 50.85 0 1170154..1170975 + 273 30062653 cobB S1204 - NAD-dependent deacetylase 1081 51.29 0 1171131..1172177 - 348 30062654 potD S1205 - spermidine/putrescine ABC transporter periplasmic substrate-binding protein 1082 49.94 0 1172174..1172968 - 264 30062655 potC S1206 - spermidine/putrescine ABC transporter membrane protein 1083 50.70 0 1172965..1173822 - 285 161486506 potB S1207 - spermidine/putrescine ABC transporter membrane protein 1084 50.84 0 1173806..1174942 - 378 30062657 potA S1208 - putrescine/spermidine ABC transporter ATPase protein 1085 49.39 0 1175192..1176418 + 408 30062658 pepT S1209 - peptidase T 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0