version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 68.93 0 625..2388 + 587 145592567 - Strop_0001 - chromosomal replication initiator protein DnaA 2 64.12 -1 2372..2842 - 156 145592568 - Strop_0002 - hypothetical protein 3 69.84 0 3151..4284 + 377 145592569 - Strop_0003 - DNA polymerase III, beta subunit 4 68.61 0 4325..5197 + 290 145592570 - Strop_0004 - 6-phosphogluconate dehydrogenase-like protein 5 73.10 +1 5214..6347 + 377 145592571 recF Strop_0005 - recombination protein F 6 76.55 +2 6337..6933 + 198 145592572 - Strop_0006 - hypothetical protein 7 69.76 0 6924..7505 - 193 145592573 - Strop_0007 - hypothetical protein 8 65.37 -1 7788..9947 + 719 145592574 - Strop_0008 - DNA gyrase, B subunit 9 66.51 0 10079..12598 + 839 145592575 - Strop_0009 - DNA gyrase subunit A 10 72.17 0 12603..13529 + 308 145592576 - Strop_0010 - hypothetical protein 11 66.12 -1 13951..14319 + 122 145592577 - Strop_0011 - glyoxalase/bleomycin resistance protein/dioxygenase 12 63.57 -1 14462..14590 + 42 145592578 - Strop_0012 - hypothetical protein 13 68.24 0 14928..15371 + 147 145592579 - Strop_0013 - hypothetical protein 14 71.97 0 15519..16367 + 282 145592580 - Strop_0014 - phenazine biosynthesis PhzC/PhzF protein 15 68.95 0 16502..19084 - 860 145592581 valS Strop_0015 - valyl-tRNA synthetase 16 73.15 +1 19204..20175 + 323 145592582 - Strop_0016 - Sua5/YciO/YrdC/YwlC family protein 17 74.12 +1 20241..24707 - 1488 145592583 - Strop_0017 - ATPase, P-type (transporting), HAD superfamily, subfamily IC 18 65.02 -1 24882..25184 + 100 145592584 - Strop_0018 - hypothetical protein 19 65.64 -1 25315..25509 + 64 145592585 - Strop_0019 - hypothetical protein 20 71.23 0 25585..26220 - 211 145592586 - Strop_0020 - DSBA oxidoreductase 21 69.93 0 26241..26669 - 142 145592587 - Strop_0021 - Fe-S metabolism associated SufE 22 67.61 0 26826..27251 - 141 145592588 - Strop_0022 - signal-transduction protein 23 68.85 0 27489..28268 + 259 145592589 - Strop_0023 - GDSL family lipase 24 71.31 0 28458..29039 + 193 145592590 - Strop_0024 - TetR family transcriptional regulator 25 69.51 0 29166..30503 + 445 145592591 - Strop_0025 - carbamoyl-phosphate synthase L chain, ATP-binding 26 70.07 0 30748..31659 + 303 145592592 - Strop_0026 - pyruvate carboxyltransferase 27 68.04 0 31857..33389 + 510 145592593 - Strop_0027 - propionyl-CoA carboxylase 28 67.36 0 33452..34606 + 384 145592594 - Strop_0028 - acyl-CoA dehydrogenase domain-containing protein 29 73.33 +1 34731..37298 + 855 145592595 - Strop_0029 - helix-turn-helix domain-containing protein 30 65.95 -1 37565..38266 - 233 145592596 - Strop_0030 - MarR family transcriptional regulator 31 67.48 0 38287..39765 + 492 145592597 - Strop_0031 - hypothetical protein 32 72.43 0 39799..41100 - 433 145592598 - Strop_0032 - hypothetical protein 33 72.11 0 41282..42034 + 250 145592599 - Strop_0033 - PASTA domain-containing protein 34 67.28 0 42091..42414 - 107 145592600 - Strop_0034 - hypothetical protein 35 67.81 0 42518..43129 - 203 145592601 - Strop_0035 - hypothetical protein 36 63.15 -1 43227..44108 + 293 145592602 - Strop_0036 - helix-turn-helix domain-containing protein 37 68.47 0 44078..44299 + 73 145592603 - Strop_0037 - hypothetical protein 38 65.71 -1 44651..44965 + 104 145592604 - Strop_0038 - hypothetical protein 39 67.76 0 45230..46789 + 519 145592605 - Strop_0039 - peptidase S8 and S53, subtilisin, kexin, sedolisin 40 70.26 0 46860..47666 - 268 145592606 - Strop_0040 - WecB/TagA/CpsF family glycosyl transferase 41 64.90 -1 47663..48736 - 357 145592607 - Strop_0041 - NAD-dependent epimerase/dehydratase 42 69.84 0 49150..49938 + 262 145592608 - Strop_0042 - FHA domain-containing protein 43 67.90 0 49945..50430 + 161 145592609 - Strop_0043 - FHA domain-containing protein 44 70.12 0 50427..51875 + 482 145592610 - Strop_0044 - protein phosphatase 2C domain-containing protein 45 68.28 0 51904..53394 + 496 145592611 - Strop_0045 - cell cycle protein 46 68.86 0 53391..54896 + 501 145592612 - Strop_0046 - peptidoglycan glycosyltransferase 47 71.27 0 54898..56286 + 462 145592613 - Strop_0047 - protein kinase 48 69.78 0 56283..58112 + 609 145592614 - Strop_0048 - protein kinase 49 68.97 0 58209..58859 - 216 145592615 - Strop_0049 - para-aminobenzoate synthase component II 50 68.38 0 58865..59155 - 96 145592616 - Strop_0050 - hypothetical protein 51 73.37 +1 59160..60725 - 521 145592617 - Strop_0051 - sortase family protein 52 68.39 0 60722..61651 - 309 145592618 - Strop_0052 - hypothetical protein 53 65.69 -1 61674..61979 + 101 145592619 - Strop_0053 - hypothetical protein 54 67.21 0 62287..64485 + 732 145592620 - Strop_0054 - hypothetical protein 55 65.78 -1 64800..65813 + 337 145592621 - Strop_0055 - NLP/P60 protein 56 67.18 0 65961..66539 - 192 145592622 dcd Strop_0056 - deoxycytidine triphosphate deaminase 57 70.60 0 66617..67150 + 177 145592623 - Strop_0057 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 58 67.09 0 67688..68875 - 395 145592624 - Strop_0058 - phage integrase family protein 59 65.50 -1 68878..69135 - 85 145592625 - Strop_0059 - DNA binding domain-containing protein 60 69.11 0 69373..70479 - 368 145592626 - Strop_0060 - hypothetical protein 61 68.50 0 70484..71194 - 236 145592627 - Strop_0061 - C-5 cytosine-specific DNA methylase 62 72.62 0 71191..72366 - 391 145592628 - Strop_0062 - hypothetical protein 63 70.43 0 72707..74860 - 717 145592629 - Strop_0063 - hypothetical protein 64 72.33 0 74857..76410 - 517 145592630 - Strop_0064 - hypothetical protein 65 67.66 0 76407..76607 - 66 145592631 - Strop_0065 - hypothetical protein 66 71.23 0 76609..77112 - 167 145592632 - Strop_0066 - hypothetical protein 67 69.96 0 77206..78267 - 353 145592633 - Strop_0067 - hypothetical protein 68 64.74 -1 78264..78575 - 103 145592634 - Strop_0068 - hypothetical protein 69 73.27 +1 78664..79329 - 221 145592635 - Strop_0069 - NUDIX hydrolase 70 70.37 0 79326..79703 - 125 145592636 - Strop_0070 - hypothetical protein 71 69.05 0 79700..79951 - 83 145592637 - Strop_0071 - hypothetical protein 72 65.28 -1 80381..81247 + 288 145592638 - Strop_0072 - regulatory protein GntR, HTH 73 71.49 0 81244..81948 + 234 145592639 - Strop_0073 - HAD family hydrolase 74 69.21 0 82600..82953 - 117 145592640 - Strop_0074 - hypothetical protein 75 63.23 -1 83109..83399 - 96 145592641 - Strop_0075 - hypothetical protein 76 70.39 0 83609..84655 - 348 145592642 - Strop_0076 - hypothetical protein 77 67.47 0 84655..85152 - 165 145592643 - Strop_0077 - ECF subfamily RNA polymerase sigma-24 factor 78 68.35 0 85513..86937 - 474 145592644 - Strop_0078 - aldehyde dehydrogenase 79 62.73 -2 87100..87633 - 177 145592645 - Strop_0079 - hypothetical protein 80 62.68 -2 87657..88007 - 116 145592646 - Strop_0080 - hypothetical protein 81 62.39 -2 88254..89795 + 513 145592647 - Strop_0081 - amidohydrolase 82 68.74 0 90293..90871 - 192 145592648 - Strop_0082 - GCN5-related N-acetyltransferase 83 66.67 0 91285..92154 - 289 145592649 - Strop_0083 - alpha/beta hydrolase fold 84 66.46 0 92818..93297 + 159 145592650 - Strop_0084 - GCN5-related N-acetyltransferase 85 71.04 0 93366..94256 + 296 145592651 - Strop_0085 - luciferase family protein 86 72.55 0 94348..94908 - 186 145592652 - Strop_0086 - phosphoribosyltransferase 87 69.42 0 95005..95730 + 241 145592653 - Strop_0087 - rare lipoprotein A 88 70.74 0 95829..96956 + 375 145592654 - Strop_0088 - stage II sporulation E family protein 89 67.75 0 97039..98892 + 617 145592655 - Strop_0089 - acyl-CoA dehydrogenase domain-containing protein 90 68.15 0 99117..99386 + 89 145592656 - Strop_0090 - hypothetical protein 91 72.44 0 99421..99957 - 178 145592657 - Strop_0091 - putative phosphohistidine phosphatase, SixA 92 67.20 0 100075..101013 - 312 145592658 - Strop_0092 - AraC family transcriptional regulator 93 70.00 0 101108..101827 + 239 145592659 - Strop_0093 - ThiJ/PfpI domain-containing protein 94 66.88 0 101824..102300 + 158 145592660 - Strop_0094 - hypothetical protein 95 68.09 0 102297..102578 + 93 145592661 - Strop_0095 - hypothetical protein 96 69.17 0 102658..103335 - 225 145592662 - Strop_0096 - hemolysin III family channel protein 97 74.90 +1 103387..104163 + 258 145592663 - Strop_0097 - allophanate hydrolase subunit 1 98 74.23 +1 104160..105098 + 312 145592664 - Strop_0098 - urea amidolyase related protein 99 72.27 0 105082..105849 + 255 145592665 - Strop_0099 - LamB/YcsF family protein 100 72.05 0 105874..107712 - 612 145592666 - Strop_0100 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.