version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 388 71.69 0 447352..448845 + 497 145592954 - Strop_0388 - major facilitator transporter 389 72.13 0 448842..450341 + 499 145592955 - Strop_0389 - pyridoxal-dependent decarboxylase 390 70.19 0 450468..451034 + 188 145592956 - Strop_0390 - NADH-quinone oxidoreductase, B subunit 391 69.53 0 451061..452107 - 348 145592957 - Strop_0391 - alcohol dehydrogenase 392 71.78 0 452287..452892 + 201 145592958 - Strop_0392 - NADH dehydrogenase (ubiquinone), 30 kDa subunit 393 69.57 0 452892..453854 + 320 145592959 - Strop_0393 - NADH dehydrogenase (quinone) 394 68.12 0 453881..454846 + 321 145592960 - Strop_0394 - transporter DMT superfamily protein 395 66.21 0 455217..455870 - 217 145592961 - Strop_0395 - two component LuxR family transcriptional regulator 396 69.33 0 455942..457216 - 424 145592962 - Strop_0396 - integral membrane sensor signal transduction histidine kinase 397 71.56 0 457349..458248 + 299 145592963 - Strop_0397 - ABC transporter related 398 68.83 0 458245..459030 + 261 145592964 - Strop_0398 - hypothetical protein 399 69.96 0 459178..460239 - 353 145592965 - Strop_0399 - glutathione S-transferase-like protein 400 70.97 0 460425..461075 + 216 145592966 - Strop_0400 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 401 73.40 +1 461072..461635 + 187 145592967 - Strop_0401 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 402 72.14 0 461632..462015 + 127 145592968 - Strop_0402 - NADH-ubiquinone oxidoreductase, chain 4L 403 74.51 +1 462012..463961 + 649 145592969 - Strop_0403 - proton-translocating NADH-quinone oxidoreductase, chain L 404 73.81 +1 463958..465469 + 503 145592970 - Strop_0404 - proton-translocating NADH-quinone oxidoreductase, chain M 405 75.05 +1 465489..467039 + 516 145592971 - Strop_0405 - NADH dehydrogenase (quinone) 406 67.32 0 467109..468029 + 306 145592972 - Strop_0406 - peptidase M48, Ste24p 407 72.86 +1 468293..469051 - 252 145592973 - Strop_0407 - hypothetical protein 408 66.95 0 469214..469912 + 232 145592974 - Strop_0408 - short-chain dehydrogenase/reductase SDR 409 62.42 -2 470127..470621 - 164 145592975 - Strop_0409 - nucleotide-binding protein 410 63.44 -1 471193..471564 - 123 145592976 - Strop_0410 - hypothetical protein 411 67.09 0 471923..472396 - 157 145592977 - Strop_0411 - hypothetical protein 412 77.27 +2 472643..473293 - 216 145592978 - Strop_0412 - hypothetical protein 413 72.49 0 473290..474921 - 543 145592979 - Strop_0413 - major facilitator transporter 414 71.79 0 474965..475804 + 279 145592980 - Strop_0414 - hypothetical protein 415 70.73 0 475823..476068 - 81 145592981 - Strop_0415 - hypothetical protein 416 66.60 0 476158..477630 + 490 145592982 - Strop_0416 - xanthine/uracil/vitamin C permease 417 68.97 0 477762..478196 + 144 145592983 - Strop_0417 - MarR family transcriptional regulator 418 68.07 0 478259..479539 + 426 145592984 - Strop_0418 - major facilitator transporter 419 69.05 0 479625..480128 + 167 145592985 - Strop_0419 - hypothetical protein 420 74.09 +1 480160..480738 + 192 145592986 - Strop_0420 - 2'-5' RNA ligase 421 75.02 +1 480740..481804 - 354 145592987 - Strop_0421 - hypothetical protein 422 70.41 0 481990..483243 - 417 145592988 - Strop_0422 - phosphoserine aminotransferase 423 70.10 0 483343..484449 - 368 145592989 - Strop_0423 - citrate synthase 2 424 72.77 +1 484569..485354 + 261 145592990 - Strop_0424 - pyridoxamine 5'-phosphate oxidase 425 73.16 +1 485351..486643 + 430 145592991 - Strop_0425 - major facilitator transporter 426 71.41 0 486661..487587 + 308 145592992 - Strop_0426 - aldose 1-epimerase 427 67.16 0 487601..488203 + 200 145592993 - Strop_0427 - nitroreductase 428 64.05 -1 488389..488694 + 101 145592994 - Strop_0428 - hypothetical protein 429 69.34 0 488729..489889 + 386 145592995 - Strop_0429 - acyl-CoA dehydrogenase domain-containing protein 430 69.96 0 490067..491464 + 465 145592996 - Strop_0430 - L-serine dehydratase 1 431 67.63 0 491519..492346 + 275 145592997 - Strop_0431 - ABC-2 type transporter 432 67.07 0 492348..493097 + 249 145592998 - Strop_0432 - ABC transporter related 433 71.63 0 493109..495061 + 650 145592999 - Strop_0433 - CDP-alcohol phosphatidyltransferase 434 71.04 0 495070..497265 + 731 145593000 - Strop_0434 - CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 435 70.34 0 497392..498753 + 453 145593001 - Strop_0435 - ABC transporter related 436 71.06 0 498862..499293 + 143 145593002 - Strop_0436 - hypothetical protein 437 70.34 0 499373..500107 + 244 145593003 - Strop_0437 - beta-phosphoglucomutase family hydrolase 438 68.27 0 500104..502479 + 791 145593004 - Strop_0438 - Kojibiose phosphorylase 439 72.38 0 502962..503609 + 215 145593005 - Strop_0439 - dienelactone hydrolase 440 61.38 -2 503707..503895 + 62 145593006 - Strop_0440 - hypothetical protein 441 68.48 0 503967..504626 - 219 145593007 - Strop_0441 - hypothetical protein 442 70.32 0 504923..505633 + 236 145593008 - Strop_0442 - carbonic anhydrase 443 66.58 0 505742..506842 - 366 145593009 - Strop_0443 - hypothetical protein 444 72.16 0 507057..508403 - 448 145593010 - Strop_0444 - YibE/F family protein 445 70.19 0 508593..508904 - 103 145593011 - Strop_0445 - hypothetical protein 446 68.35 0 508999..509235 + 78 145593012 - Strop_0446 - heavy metal transport/detoxification protein 447 72.38 0 509232..509441 + 69 145593013 - Strop_0447 - hypothetical protein 448 72.60 0 509438..511729 + 763 145593014 - Strop_0448 - heavy metal translocating P-type ATPase 449 71.84 0 512154..513197 - 347 145593015 - Strop_0449 - sodium/calcium exchanger membrane region 450 65.78 -1 513359..514150 + 263 145593016 - Strop_0450 - methyltransferase type 12 451 71.23 0 514356..515057 - 233 145593017 - Strop_0451 - spermidine synthase-like protein 452 71.14 0 515174..515710 + 178 145593018 - Strop_0452 - ECF subfamily RNA polymerase sigma-24 factor 453 73.79 +1 515707..516492 + 261 145593019 - Strop_0453 - putative transmembrane anti-sigma factor 454 71.96 0 516489..517244 + 251 145593020 - Strop_0454 - ABC transporter related 455 73.98 +1 517241..518512 + 423 145593021 - Strop_0455 - hypothetical protein 456 74.68 +1 518509..519132 + 207 145593022 - Strop_0456 - hypothetical protein 457 65.01 -1 519272..520117 + 281 145593023 - Strop_0457 - transcription factor jumonji domain-containing protein 458 67.94 0 520114..521367 + 417 145593024 - Strop_0458 - hypothetical protein 459 71.20 0 521364..522224 + 286 145593025 - Strop_0459 - HpcH/HpaI aldolase 460 72.05 0 522221..523186 + 321 145593026 - Strop_0460 - ornithine cyclodeaminase/mu-crystallin 461 71.91 0 523173..524525 + 450 145593027 - Strop_0461 - hypothetical protein 462 65.65 -1 524576..525067 + 163 145593028 - Strop_0462 - dehydratase 463 69.79 0 525178..526680 + 500 145593029 - Strop_0463 - peptidase M24 464 69.08 0 526703..526909 + 68 145593030 - Strop_0464 - hypothetical protein 465 71.55 0 526954..527649 - 231 145593031 - Strop_0465 - hypothetical protein 466 75.85 +1 527646..529202 - 518 145593032 - Strop_0466 - hypothetical protein 467 69.09 0 529234..530928 - 564 145593033 - Strop_0467 - ATPase central domain-containing protein 468 70.31 0 531153..531536 + 127 145593034 - Strop_0468 - hypothetical protein 469 70.78 0 531533..532018 + 161 145593035 - Strop_0469 - hypothetical protein 470 71.51 0 532012..533292 + 426 145593036 - Strop_0470 - hypothetical protein 471 66.44 0 533303..534604 - 433 145593037 - Strop_0471 - peptidase S8 and S53, subtilisin, kexin, sedolisin 472 68.88 0 534703..536283 - 526 145593038 - Strop_0472 - hypothetical protein 473 62.34 -2 536319..537080 - 253 145593039 - Strop_0473 - hypothetical protein 474 69.37 0 537101..541057 - 1318 145593040 - Strop_0474 - cell divisionFtsK/SpoIIIE 475 72.50 0 541194..542582 + 462 145593041 - Strop_0475 - hypothetical protein 476 66.27 0 542592..543353 - 253 145593042 - Strop_0476 - hypothetical protein 477 68.96 0 543491..544930 + 479 145593043 - Strop_0477 - hypothetical protein 478 63.94 -1 545073..545402 + 109 145593044 - Strop_0478 - hypothetical protein 479 64.93 -1 545423..545710 + 95 145593045 - Strop_0479 - hypothetical protein 480 69.44 0 545814..547109 - 431 145593046 - Strop_0480 - peptidase S8 and S53, subtilisin, kexin, sedolisin 481 62.33 -2 547220..547657 + 145 145593047 - Strop_0481 - hypothetical protein 482 63.72 -1 547654..547992 + 112 145593048 - Strop_0482 - hypothetical protein 483 70.06 0 548035..559299 + 3754 145593049 - Strop_0483 - hypothetical protein 484 69.43 0 559353..560870 + 505 145593050 - Strop_0484 - hypothetical protein 485 67.68 0 560867..561556 + 229 145593051 - Strop_0485 - hypothetical protein 486 73.44 +1 561526..562071 - 181 145593052 - Strop_0486 - hypothetical protein 487 65.41 -1 562421..563698 - 425 145593053 - Strop_0487 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0