version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3950 70.35 0 4555521..4556225 - 234 145596516 - Strop_4005 - hypothetical protein 3951 66.33 0 4556222..4557103 - 293 145596517 - Strop_4006 - hypothetical protein 3952 75.11 +1 4557208..4557906 - 232 145596518 - Strop_4007 - hypothetical protein 3953 70.00 0 4558177..4559076 - 299 145596519 - Strop_4008 - RecT protein 3954 71.11 0 4559073..4559927 - 284 145596520 - Strop_4009 - hypothetical protein 3955 74.91 +1 4560397..4560675 - 92 145596521 - Strop_4010 - hypothetical protein 3956 74.67 +1 4560902..4561126 - 74 145596522 - Strop_4011 - hypothetical protein 3957 69.30 0 4561123..4561578 - 151 145596523 - Strop_4012 - hypothetical protein 3958 67.60 0 4561842..4562696 - 284 145596524 - Strop_4013 - BRO domain-containing protein 3959 61.36 -2 4562693..4562956 - 87 145596525 - Strop_4014 - hypothetical protein 3960 64.56 -1 4563044..4563613 + 189 145596526 - Strop_4015 - helix-turn-helix domain-containing protein 3961 65.30 -1 4563630..4565093 + 487 145596527 - Strop_4016 - phage integrase family protein 3962 69.80 0 4565442..4567259 + 605 145596528 - Strop_4017 - hypothetical protein 3963 67.75 0 4567321..4568154 - 277 145596529 - Strop_4018 - PSP1 domain-containing protein 3964 74.14 +1 4568218..4568913 - 231 145596530 - Strop_4019 - hypothetical protein 3965 74.84 +1 4568913..4569218 - 101 145596531 - Strop_4020 - hypothetical protein 3966 71.82 0 4569219..4569548 - 109 145596532 - Strop_4021 - hypothetical protein 3967 75.62 +1 4569679..4570962 - 427 145596533 - Strop_4022 - DNA polymerase III, delta prime subunit 3968 71.62 0 4570962..4573079 - 705 145596534 - Strop_4023 - thymidylate kinase 3969 75.39 +1 4573360..4574643 + 427 145596535 - Strop_4024 - hypothetical protein 3970 67.51 0 4574715..4575308 - 197 145596536 - Strop_4025 - regulatory protein, TetR 3971 70.40 0 4575531..4576844 + 437 145596537 - Strop_4026 - FAD-linked oxidoreductase 3972 69.10 0 4576864..4579695 - 943 145596538 - Strop_4027 - DNA topoisomerase I 3973 75.59 +1 4579986..4580702 - 238 145596539 - Strop_4028 - hypothetical protein 3974 70.02 0 4580693..4581229 - 178 145596540 - Strop_4029 - hypothetical protein 3975 69.56 0 4581348..4583696 - 782 145596541 hppA Strop_4030 - membrane-bound proton-translocating pyrophosphatase 3976 69.70 0 4584131..4584559 - 142 145596542 - Strop_4031 - hypothetical protein 3977 64.91 -1 4584565..4585020 - 151 145596543 - Strop_4032 - anti-anti-sigma factor 3978 73.39 +1 4585050..4587458 + 802 145596544 - Strop_4033 - DEAD/DEAH box helicase domain-containing protein 3979 76.80 +2 4587535..4587978 - 147 145596545 - Strop_4034 - hypothetical protein 3980 72.30 0 4587975..4588382 - 135 145596546 - Strop_4035 - hypothetical protein 3981 64.94 -1 4588379..4588552 - 57 145596547 - Strop_4036 - hypothetical protein 3982 74.15 +1 4588573..4589334 - 253 145596548 - Strop_4037 - type II secretion system protein 3983 73.90 +1 4589331..4590326 - 331 145596549 - Strop_4038 - hypothetical protein 3984 71.31 0 4590323..4591528 - 401 145596550 - Strop_4039 - type II secretion system protein E 3985 76.02 +1 4591525..4592625 - 366 145596551 - Strop_4040 - hypothetical protein 3986 68.28 0 4593388..4594191 + 267 145596552 - Strop_4041 - HAD family hydrolase 3987 75.20 +1 4594249..4594998 - 249 145596553 - Strop_4042 - hypothetical protein 3988 68.81 0 4595041..4597188 + 715 145596554 - Strop_4043 - acetyl-CoA synthetase 3989 72.13 0 4597445..4598377 + 310 145596555 - Strop_4044 - alpha/beta hydrolase fold 3990 72.13 0 4598388..4598735 - 115 145596556 - Strop_4045 - hypothetical protein 3991 72.67 0 4598750..4601149 - 799 145596557 - Strop_4046 - hypothetical protein 3992 65.17 -1 4601366..4601833 + 155 145596558 - Strop_4047 - hypothetical protein 3993 64.61 -1 4602120..4602800 - 226 145596559 - Strop_4048 - hypothetical protein 3994 68.31 0 4603269..4605395 + 708 145596560 - Strop_4049 - hypothetical protein 3995 69.96 0 4605520..4606308 - 262 145596561 - Strop_4050 - regulatory protein, IclR 3996 71.90 0 4606573..4607643 - 356 145596562 - Strop_4051 - polyprenyl synthetase 3997 69.31 0 4607784..4609337 - 517 145596563 - Strop_4052 - NADH dehydrogenase subunit N 3998 65.75 -1 4609334..4610866 - 510 145596564 - Strop_4053 - proton-translocating NADH-quinone oxidoreductase, chain M 3999 67.59 0 4610949..4612907 - 652 145596565 - Strop_4054 - NADH dehydrogenase subunit L 4000 62.58 -2 4612921..4613238 - 105 145596566 - Strop_4055 - NADH dehydrogenase subunit K 4001 69.00 0 4613235..4614005 - 256 145596567 - Strop_4056 - NADH dehydrogenase subunit J 4002 67.45 0 4614002..4614637 - 211 145596568 - Strop_4057 - NADH dehydrogenase subunit I 4003 67.41 0 4614639..4615982 - 447 145596569 - Strop_4058 - NADH dehydrogenase subunit H 4004 71.71 0 4616044..4618563 - 839 145596570 - Strop_4059 - NADH dehydrogenase subunit G 4005 69.14 0 4618563..4619894 - 443 145596571 - Strop_4060 - NADH-quinone oxidoreductase, F subunit 4006 70.75 0 4619891..4620844 - 317 145596572 - Strop_4061 - NADH dehydrogenase subunit E 4007 67.80 0 4620841..4622166 - 441 145596573 - Strop_4062 - NADH dehydrogenase subunit D 4008 69.78 0 4622267..4623004 - 245 145596574 - Strop_4063 - NADH dehydrogenase subunit C 4009 67.11 0 4623048..4623728 - 226 145596575 - Strop_4064 - NADH-quinone oxidoreductase, B subunit 4010 63.93 -1 4623743..4624108 - 121 145596576 - Strop_4065 - NADH dehydrogenase subunit A 4011 70.52 0 4624218..4625489 - 423 145596577 - Strop_4066 - geranylgeranyl reductase 4012 73.12 +1 4625742..4626500 - 252 145596578 - Strop_4067 - ubiquinone/menaquinone biosynthesis methyltransferase 4013 68.78 0 4626526..4627710 - 394 145596579 - Strop_4068 - radical SAM domain-containing protein 4014 72.52 0 4627843..4628952 - 369 145596580 - Strop_4069 - phenylacetate-CoA oxygenase/reductase, PaaK subunit 4015 71.28 0 4628949..4629425 - 158 145596581 - Strop_4070 - phenylacetate-CoA oxygenase, PaaJ subunit 4016 70.90 0 4629422..4630225 - 267 145596582 - Strop_4071 - phenylacetate-CoA oxygenase, PaaI subunit 4017 72.90 +1 4630222..4630542 - 106 145596583 - Strop_4072 - phenylacetate-CoA oxygenase subunit PaaB 4018 68.74 0 4630539..4631600 - 353 145596584 - Strop_4073 - phenylacetate-CoA oxygenase subunit PaaA 4019 68.59 0 4631946..4632881 + 311 145596585 - Strop_4074 - hypothetical protein 4020 66.77 0 4632881..4633813 + 310 145596586 - Strop_4075 - hypothetical protein 4021 70.05 0 4633915..4634829 - 304 145596587 - Strop_4076 - hypothetical protein 4022 70.74 0 4634866..4636953 - 695 145596588 - Strop_4077 - hypothetical protein 4023 73.25 +1 4637388..4638146 + 252 145596589 - Strop_4078 - glyoxalase/bleomycin resistance protein/dioxygenase 4024 72.47 0 4638241..4639050 - 269 145596590 - Strop_4079 - ABC transporter related 4025 73.00 +1 4639047..4640135 - 362 145596591 - Strop_4080 - transport system permease protein 4026 69.96 0 4640170..4641384 - 404 145596592 - Strop_4081 - periplasmic binding protein 4027 68.58 0 4641393..4643273 - 626 145596593 - Strop_4082 - peptidase M14, carboxypeptidase A 4028 68.03 0 4643403..4643696 - 97 145596594 - Strop_4083 - hypothetical protein 4029 71.17 0 4643732..4644220 - 162 145596595 - Strop_4084 - hypothetical protein 4030 66.32 0 4644192..4645361 - 389 145596596 - Strop_4085 - radical SAM domain-containing protein 4031 71.75 0 4645628..4647181 + 517 145596597 - Strop_4086 - NLP/P60 protein 4032 74.39 +1 4647368..4648273 + 301 145596598 - Strop_4087 - hypothetical protein 4033 72.29 0 4648471..4649856 + 461 145596599 - Strop_4088 - DEAD/DEAH box helicase domain-containing protein 4034 70.05 0 4649895..4650986 - 363 145596600 - Strop_4089 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 4035 66.01 -1 4651144..4651602 - 152 145596601 - Strop_4090 - AsnC/Lrp family regulatory protein 4036 69.60 0 4651874..4652146 + 90 145596602 - Strop_4091 - DNA binding domain-containing protein 4037 72.06 0 4652208..4652837 - 209 145596603 - Strop_4092 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 4038 70.87 0 4652893..4653843 - 316 145596604 ubiA Strop_4093 - prenyltransferase 4039 68.04 0 4653843..4655303 - 486 145596605 - Strop_4094 - UbiD family decarboxylase 4040 69.12 0 4655388..4656365 - 325 145596606 - Strop_4095 - cytochrome c assembly protein 4041 69.17 0 4656365..4658002 - 545 145596607 - Strop_4096 - ResB family protein 4042 71.79 0 4658002..4658859 - 285 145596608 - Strop_4097 - cytochrome c biogenesis protein, transmembrane region 4043 69.79 0 4658859..4659434 - 191 145596609 - Strop_4098 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 4044 70.64 0 4659434..4660087 - 217 145596610 - Strop_4099 - phosphoglycerate mutase 4045 72.46 0 4660074..4661420 - 448 145596611 - Strop_4100 - glutamate-1-semialdehyde-2,1-aminomutase 4046 65.43 -1 4661556..4661879 + 107 145596612 - Strop_4101 - anti-anti-sigma factor 4047 68.64 0 4661883..4662440 - 185 145596613 - Strop_4102 - response regulator receiver 4048 66.98 0 4662437..4665976 - 1179 145596614 - Strop_4103 - ATPase domain-containing protein 4049 72.52 0 4666159..4668243 + 694 145596615 - Strop_4104 - stage II sporulation E family protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0