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Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3855 67.20 0 4467468..4467653 - 61 145596421 - Strop_3910 - ribosomal protein S14 3856 64.74 -1 4467655..4468224 - 189 145596422 - Strop_3911 - ribosomal protein L5 3857 64.53 -1 4468221..4468547 - 108 145596423 rplX Strop_3912 - 50S ribosomal protein L24 3858 66.40 0 4468544..4468912 - 122 145596424 rplN Strop_3913 - 50S ribosomal protein L14 3859 64.49 -1 4469011..4469286 - 91 145596425 - Strop_3914 - ribosomal protein S17 3860 65.82 -1 4469283..4469519 - 78 145596426 - Strop_3915 - ribosomal protein L29 3861 65.26 -1 4469519..4469944 - 141 145596427 rplP Strop_3916 - 50S ribosomal protein L16 3862 69.67 0 4469948..4470814 - 288 145596428 - Strop_3917 - ribosomal protein S3 3863 70.81 0 4470814..4471272 - 152 145596429 - Strop_3918 - ribosomal protein L22 3864 62.77 -2 4471313..4471594 - 93 145596430 - Strop_3919 - ribosomal protein S19 3865 68.81 0 4471607..4472446 - 279 145596431 rplB Strop_3920 - 50S ribosomal protein L2 3866 63.37 -1 4472459..4472761 - 100 145596432 - Strop_3921 - ribosomal protein L25/L23 3867 68.97 0 4472758..4473408 - 216 145596433 - Strop_3922 - ribosomal protein L4/L1e 3868 67.58 0 4473405..4474064 - 219 145596434 - Strop_3923 - ribosomal protein L3 3869 64.40 -1 4474076..4474384 - 102 145596435 rpsJ Strop_3924 - 30S ribosomal protein S10 3870 65.49 -1 4474732..4475925 - 397 145596436 - Strop_3925 - elongation factor Tu 3871 64.38 -1 4476148..4478244 - 698 145596437 - Strop_3926 - translation elongation factor G 3872 68.79 0 4478319..4478789 - 156 145596438 - Strop_3927 - 30S ribosomal protein S7 3873 66.40 0 4478791..4479165 - 124 145596439 rpsL Strop_3928 - 30S ribosomal protein S12 3874 71.10 0 4479652..4480080 - 142 145596440 - Strop_3929 - hypothetical protein 3875 69.89 0 4480370..4480741 - 123 145596441 - Strop_3930 - hypothetical protein 3876 67.19 0 4480766..4481149 - 127 145596442 - Strop_3931 - glyoxalase/bleomycin resistance protein/dioxygenase 3877 66.02 -1 4481199..4485092 - 1297 145596443 - Strop_3932 - DNA-directed RNA polymerase subunit beta' 3878 65.68 -1 4485213..4488644 - 1143 145596444 rpoB Strop_3933 - DNA-directed RNA polymerase subunit beta 3879 65.89 -1 4489207..4489593 - 128 145596445 - Strop_3934 - ribosomal protein L7/L12 3880 67.77 0 4489649..4490194 - 181 145596446 rplJ Strop_3935 - 50S ribosomal protein L10 3881 66.53 0 4490592..4491308 - 238 145596447 - Strop_3936 - ribosomal protein L1 3882 66.67 0 4491387..4491818 - 143 145596448 - Strop_3937 - ribosomal protein L11 3883 65.02 -1 4492011..4492739 - 242 145596449 - Strop_3938 - transcription termination/antitermination factor NusG 3884 66.93 0 4492778..4493158 - 126 145596450 - Strop_3939 - preprotein translocase, SecE subunit 3885 68.96 0 4493566..4493958 - 130 145596451 - Strop_3940 - dehydratase 3886 67.73 0 4493960..4494430 - 156 145596452 - Strop_3941 - hypothetical protein 3887 63.69 -1 4494519..4494686 - 55 145596453 - Strop_3942 - ribosomal protein L33 3888 67.93 0 4495082..4497610 - 842 145596454 - Strop_3943 - diguanylate cyclase 3889 67.33 0 4498022..4498474 + 150 145596455 - Strop_3944 - hypothetical protein 3890 69.12 0 4498504..4499769 - 421 145596456 - Strop_3945 - major facilitator transporter 3891 72.59 0 4499854..4500816 + 320 145596457 - Strop_3946 - hypothetical protein 3892 66.67 0 4500777..4501163 - 128 145596458 - Strop_3947 - cold-shock protein, DNA-binding 3893 74.54 +1 4501372..4503834 + 820 145596459 - Strop_3948 - hypothetical protein 3894 67.93 0 4503847..4504083 - 78 145596460 - Strop_3949 - hypothetical protein 3895 69.19 0 4504440..4506185 + 581 145596461 - Strop_3950 - helicase domain-containing protein 3896 66.84 0 4506300..4508024 + 574 145596462 - Strop_3951 - thiamine pyrophosphate binding domain-containing protein 3897 65.19 -1 4508024..4508566 + 180 145596463 - Strop_3952 - hypothetical protein 3898 61.46 -2 4508631..4508918 - 95 145596464 - Strop_3953 - regulatory protein GntR, HTH 3899 70.16 0 4509215..4509529 + 104 145596465 - Strop_3954 - hypothetical protein 3900 71.71 0 4509526..4509783 + 85 145596466 - Strop_3955 - hypothetical protein 3901 61.48 -2 4510223..4511089 - 288 145596467 - Strop_3956 - hypothetical protein 3902 66.67 0 4511275..4512540 - 421 145596468 - Strop_3957 - hypothetical protein 3903 67.05 0 4512562..4513875 - 437 145596469 - Strop_3958 - peptidase M48, Ste24p 3904 65.96 -1 4514133..4514558 + 141 145596470 - Strop_3959 - glyoxalase/bleomycin resistance protein/dioxygenase 3905 63.60 -1 4514605..4514832 - 75 145596471 - Strop_3960 - regulatory protein GntR, HTH 3906 70.16 0 4515171..4515485 + 104 145596472 - Strop_3961 - hypothetical protein 3907 71.71 0 4515482..4515739 + 85 145596473 - Strop_3962 - hypothetical protein 3908 65.84 -1 4515806..4516651 - 281 145596474 - Strop_3963 - hypothetical protein 3909 69.14 0 4516787..4517311 - 174 145596475 - Strop_3964 - regulatory protein, TetR 3910 69.64 0 4517371..4518345 + 324 145596476 - Strop_3965 - hypothetical protein 3911 66.67 0 4518384..4518794 + 136 145596477 - Strop_3966 - hypothetical protein 3912 68.43 0 4518881..4519789 - 302 145596478 - Strop_3967 - DNA primase, small subunit 3913 72.10 0 4519782..4520720 - 312 145596479 - Strop_3968 - ATP dependent DNA ligase 3914 66.57 0 4520806..4521840 + 344 145596480 - Strop_3969 - Ku domain-containing protein 3915 74.74 +1 4521992..4522660 + 222 145596481 - Strop_3970 - peptidylprolyl isomerase, FKBP-type 3916 75.09 +1 4522791..4523645 + 284 145596482 - Strop_3971 - hypothetical protein 3917 71.76 0 4523681..4524406 + 241 145596483 - Strop_3972 - HAD family hydrolase 3918 70.15 0 4524469..4526106 - 545 145596484 - Strop_3973 - acyl-CoA synthetase 3919 68.43 0 4526184..4526693 + 169 145596485 - Strop_3974 - NUDIX hydrolase 3920 74.54 +1 4526755..4528443 + 562 145596486 - Strop_3975 - rfaE bifunctional protein 3921 71.66 0 4528440..4529300 + 286 145596487 - Strop_3976 - glycosyl transferase family protein 3922 74.45 +1 4529323..4530453 - 376 145596488 - Strop_3977 - glycosyl transferase family protein 3923 72.66 0 4530461..4530994 - 177 145596489 - Strop_3978 - heat shock protein Hsp20 3924 70.96 0 4531009..4531497 - 162 145596490 - Strop_3979 - hypothetical protein 3925 68.61 0 4531682..4532299 + 205 145596491 - Strop_3980 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 3926 72.87 +1 4532312..4533940 - 542 145596492 - Strop_3981 - acyl-CoA dehydrogenase domain-containing protein 3927 65.26 -1 4534160..4535650 + 496 145596493 - Strop_3982 - polymorphic outer membrane protein 3928 69.70 0 4535767..4536261 + 164 145596494 - Strop_3983 - OsmC family protein 3929 70.42 0 4536350..4537522 + 390 145596495 - Strop_3984 - Serine-type D-Ala-D-Ala carboxypeptidase 3930 63.28 -1 4537581..4538672 - 363 145596496 - Strop_3985 - hypothetical protein 3931 68.82 0 4539172..4539543 + 123 145596497 - Strop_3986 - hypothetical protein 3932 64.10 -1 4539631..4541034 - 467 145596498 - Strop_3987 - hypothetical protein 3933 67.85 0 4541235..4541828 + 197 145596499 - Strop_3988 - GCN5-related N-acetyltransferase 3934 67.84 0 4541832..4542257 - 141 145596500 - Strop_3989 - hypothetical protein 3935 64.02 -1 4542417..4543736 - 439 145596501 - Strop_3990 - hypothetical protein 3936 65.96 -1 4543960..4544382 + 140 145596502 - Strop_3991 - hypothetical protein 3937 65.65 -1 4544497..4545870 + 457 145596503 - Strop_3992 - hypothetical protein 3938 62.26 -2 4546112..4546429 + 105 145596504 - Strop_3993 - hypothetical protein 3939 69.79 0 4546542..4546829 - 95 145596505 - Strop_3994 - hypothetical protein 3940 68.58 0 4546826..4547503 - 225 145596506 - Strop_3995 - regulatory protein, TetR 3941 66.55 0 4547645..4548478 + 277 145596507 - Strop_3996 - alpha/beta hydrolase fold 3942 66.67 0 4548605..4549621 + 338 145596508 - Strop_3997 - alpha/beta hydrolase fold 3943 64.37 -1 4549748..4550095 + 115 145596509 - Strop_3998 - hypothetical protein 3944 68.21 0 4550550..4551134 + 194 145596510 - Strop_3999 - hypothetical protein 3945 65.97 -1 4551468..4552043 + 191 145596511 - Strop_4000 - hypothetical protein 3946 71.67 0 4552045..4553184 - 379 145596512 - Strop_4001 - hypothetical protein 3947 71.37 0 4553360..4553890 - 176 145596513 - Strop_4002 - hypothetical protein 3948 66.92 0 4554215..4554994 + 259 145596514 - Strop_4003 - hypothetical protein 3949 71.68 0 4555006..4555464 - 152 145596515 - Strop_4004 - hypothetical protein 3950 70.35 0 4555521..4556225 - 234 145596516 - Strop_4005 - hypothetical protein 3951 66.33 0 4556222..4557103 - 293 145596517 - Strop_4006 - hypothetical protein 3952 75.11 +1 4557208..4557906 - 232 145596518 - Strop_4007 - hypothetical protein 3953 70.00 0 4558177..4559076 - 299 145596519 - Strop_4008 - RecT protein 3954 71.11 0 4559073..4559927 - 284 145596520 - Strop_4009 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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