version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 333 69.38 0 384799..385461 + 220 145592899 - Strop_0333 - hypothetical protein 334 70.14 0 385875..387227 - 450 145592900 - Strop_0334 - major facilitator transporter 335 68.21 0 387363..388139 + 258 145592901 - Strop_0335 - phosphoglycerate mutase 1 family protein 336 71.21 0 388340..389572 + 410 145592902 - Strop_0336 - histidine kinase 337 67.40 0 389592..390275 + 227 145592903 - Strop_0337 - two component transcriptional regulator 338 72.49 0 390360..391166 - 268 145592904 - Strop_0338 - hypothetical protein 339 73.02 +1 391240..392184 + 314 145592905 - Strop_0339 - Ppx/GppA phosphatase 340 71.95 0 392238..393146 + 302 145592906 - Strop_0340 - xylose isomerase domain-containing protein 341 67.64 0 393139..393753 - 204 145592907 - Strop_0341 - hypothetical protein 342 68.85 0 393822..394739 + 305 145592908 - Strop_0342 - proline dehydrogenase 343 68.57 0 395085..395294 + 69 145592909 - Strop_0343 - DNA binding domain-containing protein 344 63.73 -1 395497..395598 + 33 145592910 - Strop_0344 - hypothetical protein 345 72.61 0 395718..396794 + 358 145592911 - Strop_0345 - NAD-dependent epimerase/dehydratase 346 69.53 0 396791..397663 + 290 145592912 - Strop_0346 - phospholipid/glycerol acyltransferase 347 71.99 0 397733..399010 + 425 145592913 - Strop_0347 - major facilitator transporter 348 72.16 0 399039..399911 - 290 145592914 - Strop_0348 - HAD family hydrolase 349 71.53 0 400074..400958 - 294 145592915 - Strop_0349 - hypothetical protein 350 71.05 0 401222..402157 - 311 145592916 - Strop_0350 - ECF subfamily RNA polymerase sigma-24 factor 351 66.67 0 402944..403195 + 83 145592917 - Strop_0351 - glutaredoxin 2 352 68.06 0 403218..403865 + 215 145592918 - Strop_0352 - hydrolase 353 69.78 0 403935..404576 - 213 145592919 - Strop_0353 - two component LuxR family transcriptional regulator 354 71.07 0 404587..405903 - 438 145592920 - Strop_0354 - integral membrane sensor signal transduction histidine kinase 355 68.87 0 406383..407153 + 256 145592921 - Strop_0355 - redox-sensing transcriptional repressor Rex 356 72.81 +1 407150..408517 + 455 145592922 - Strop_0356 - glutamyl-tRNA reductase 357 73.17 +1 408517..409485 + 322 145592923 - Strop_0357 - porphobilinogen deaminase 358 72.49 0 409482..411062 + 526 145592924 - Strop_0358 - uroporphyrinogen III synthase HEM4 359 71.14 0 411076..412059 + 327 145592925 - Strop_0359 - delta-aminolevulinic acid dehydratase 360 70.70 0 412232..415507 - 1091 145592926 - Strop_0360 - endonuclease/exonuclease/phosphatase 361 69.66 0 415595..416596 - 333 145592927 - Strop_0361 - GCN5-related N-acetyltransferase 362 74.88 +1 416668..417945 - 425 145592928 - Strop_0362 - membrane-bound lytic murein transglycosylase B-like protein 363 71.83 0 418002..418214 + 70 145592929 - Strop_0363 - FmdB family regulatory protein 364 72.26 0 418363..421311 + 982 145592930 - Strop_0364 - adenylate cyclase 365 70.90 0 421138..421869 - 243 145592931 - Strop_0365 - methyltransferase type 11 366 70.52 0 422088..422450 + 120 145592932 - Strop_0366 - hypothetical protein 367 61.96 -2 422530..422784 + 84 145592933 - Strop_0367 - hypothetical protein 368 66.32 0 423138..423716 + 192 145592934 - Strop_0368 - integrase catalytic subunit 369 71.59 0 425098..425910 + 270 145592935 - Strop_0369 - inositol monophosphatase 370 66.27 0 426119..427126 + 335 145592936 - Strop_0370 - hypothetical protein 371 72.59 0 427163..428716 + 517 145592937 - Strop_0371 - hypothetical protein 372 68.76 0 428792..429460 - 222 145592938 - Strop_0372 - TrkA domain-containing protein 373 66.97 0 429450..430784 - 444 145592939 - Strop_0373 - H(+)-transporting two-sector ATPase 374 74.73 +1 430869..431711 + 280 145592940 - Strop_0374 - short-chain dehydrogenase/reductase SDR 375 67.40 0 431740..432555 - 271 145592941 - Strop_0375 - hypothetical protein 376 72.00 0 432662..434800 + 712 145592942 - Strop_0376 - ATP-dependent DNA helicase RecQ 377 71.94 0 434805..435221 - 138 145592943 - Strop_0377 - XRE family transcriptional regulator 378 72.39 0 435350..436555 - 401 145592944 - Strop_0378 - hypothetical protein 379 71.81 0 436657..438522 - 621 145592945 - Strop_0379 - DEAD/DEAH box helicase domain-containing protein 380 70.61 0 438890..439117 - 75 145592946 - Strop_0380 - hypothetical protein 381 69.33 0 439183..439821 - 212 145592947 - Strop_0381 - TetR family transcriptional regulator 382 75.23 +1 439967..442186 + 739 145592948 - Strop_0382 - hypothetical protein 383 67.68 0 442332..443513 + 393 145592949 - Strop_0383 - molybdopterin biosynthesis-like protein MoeZ 384 74.57 +1 443582..444454 + 290 145592950 - Strop_0384 - hypothetical protein 385 70.21 0 444542..445783 - 413 145592951 proA Strop_0385 - gamma-glutamyl phosphate reductase 386 71.42 0 445835..446992 - 385 145592952 - Strop_0386 - gamma-glutamyl kinase 387 76.04 +1 447033..447320 + 95 145592953 - Strop_0387 - methylated-DNA-(protein)-cysteine S-methyltransferase 388 71.69 0 447352..448845 + 497 145592954 - Strop_0388 - major facilitator transporter 389 72.13 0 448842..450341 + 499 145592955 - Strop_0389 - pyridoxal-dependent decarboxylase 390 70.19 0 450468..451034 + 188 145592956 - Strop_0390 - NADH-quinone oxidoreductase, B subunit 391 69.53 0 451061..452107 - 348 145592957 - Strop_0391 - alcohol dehydrogenase 392 71.78 0 452287..452892 + 201 145592958 - Strop_0392 - NADH dehydrogenase (ubiquinone), 30 kDa subunit 393 69.57 0 452892..453854 + 320 145592959 - Strop_0393 - NADH dehydrogenase (quinone) 394 68.12 0 453881..454846 + 321 145592960 - Strop_0394 - transporter DMT superfamily protein 395 66.21 0 455217..455870 - 217 145592961 - Strop_0395 - two component LuxR family transcriptional regulator 396 69.33 0 455942..457216 - 424 145592962 - Strop_0396 - integral membrane sensor signal transduction histidine kinase 397 71.56 0 457349..458248 + 299 145592963 - Strop_0397 - ABC transporter related 398 68.83 0 458245..459030 + 261 145592964 - Strop_0398 - hypothetical protein 399 69.96 0 459178..460239 - 353 145592965 - Strop_0399 - glutathione S-transferase-like protein 400 70.97 0 460425..461075 + 216 145592966 - Strop_0400 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 401 73.40 +1 461072..461635 + 187 145592967 - Strop_0401 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 402 72.14 0 461632..462015 + 127 145592968 - Strop_0402 - NADH-ubiquinone oxidoreductase, chain 4L 403 74.51 +1 462012..463961 + 649 145592969 - Strop_0403 - proton-translocating NADH-quinone oxidoreductase, chain L 404 73.81 +1 463958..465469 + 503 145592970 - Strop_0404 - proton-translocating NADH-quinone oxidoreductase, chain M 405 75.05 +1 465489..467039 + 516 145592971 - Strop_0405 - NADH dehydrogenase (quinone) 406 67.32 0 467109..468029 + 306 145592972 - Strop_0406 - peptidase M48, Ste24p 407 72.86 +1 468293..469051 - 252 145592973 - Strop_0407 - hypothetical protein 408 66.95 0 469214..469912 + 232 145592974 - Strop_0408 - short-chain dehydrogenase/reductase SDR 409 62.42 -2 470127..470621 - 164 145592975 - Strop_0409 - nucleotide-binding protein 410 63.44 -1 471193..471564 - 123 145592976 - Strop_0410 - hypothetical protein 411 67.09 0 471923..472396 - 157 145592977 - Strop_0411 - hypothetical protein 412 77.27 +2 472643..473293 - 216 145592978 - Strop_0412 - hypothetical protein 413 72.49 0 473290..474921 - 543 145592979 - Strop_0413 - major facilitator transporter 414 71.79 0 474965..475804 + 279 145592980 - Strop_0414 - hypothetical protein 415 70.73 0 475823..476068 - 81 145592981 - Strop_0415 - hypothetical protein 416 66.60 0 476158..477630 + 490 145592982 - Strop_0416 - xanthine/uracil/vitamin C permease 417 68.97 0 477762..478196 + 144 145592983 - Strop_0417 - MarR family transcriptional regulator 418 68.07 0 478259..479539 + 426 145592984 - Strop_0418 - major facilitator transporter 419 69.05 0 479625..480128 + 167 145592985 - Strop_0419 - hypothetical protein 420 74.09 +1 480160..480738 + 192 145592986 - Strop_0420 - 2'-5' RNA ligase 421 75.02 +1 480740..481804 - 354 145592987 - Strop_0421 - hypothetical protein 422 70.41 0 481990..483243 - 417 145592988 - Strop_0422 - phosphoserine aminotransferase 423 70.10 0 483343..484449 - 368 145592989 - Strop_0423 - citrate synthase 2 424 72.77 +1 484569..485354 + 261 145592990 - Strop_0424 - pyridoxamine 5'-phosphate oxidase 425 73.16 +1 485351..486643 + 430 145592991 - Strop_0425 - major facilitator transporter 426 71.41 0 486661..487587 + 308 145592992 - Strop_0426 - aldose 1-epimerase 427 67.16 0 487601..488203 + 200 145592993 - Strop_0427 - nitroreductase 428 64.05 -1 488389..488694 + 101 145592994 - Strop_0428 - hypothetical protein 429 69.34 0 488729..489889 + 386 145592995 - Strop_0429 - acyl-CoA dehydrogenase domain-containing protein 430 69.96 0 490067..491464 + 465 145592996 - Strop_0430 - L-serine dehydratase 1 431 67.63 0 491519..492346 + 275 145592997 - Strop_0431 - ABC-2 type transporter 432 67.07 0 492348..493097 + 249 145592998 - Strop_0432 - ABC transporter related 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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