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Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3490 70.51 0 4061097..4063700 + 867 145596056 - Strop_3544 - HAD family hydrolase 3491 74.24 +1 4063797..4065050 - 417 145596057 - Strop_3545 - uroporphyrin-III C-methyltransferase 3492 74.06 +1 4065085..4066179 - 364 145596058 - Strop_3546 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3493 73.47 +1 4066176..4067366 - 396 145596059 - Strop_3547 - hypothetical protein 3494 67.79 0 4067398..4069530 + 710 145596060 - Strop_3548 - glycosyl transferase family protein 3495 71.08 0 4069568..4070428 + 286 145596061 - Strop_3549 - hypothetical protein 3496 68.60 0 4070539..4070745 - 68 145596062 - Strop_3550 - hypothetical protein 3497 71.20 0 4070889..4072235 - 448 145596063 - Strop_3551 - hypothetical protein 3498 74.32 +1 4072222..4072887 - 221 145596064 - Strop_3552 - hypothetical protein 3499 71.89 0 4073039..4073440 + 133 145596065 - Strop_3553 - rhodanese domain-containing protein 3500 72.09 0 4073519..4075084 - 521 145596066 - Strop_3554 - cobyric acid synthase CobQ 3501 75.85 +1 4075081..4076082 - 333 145596067 cobD Strop_3555 - cobalamin biosynthesis protein 3502 72.15 0 4076347..4077039 - 230 145596068 - Strop_3556 - single-strand binding protein 3503 68.21 0 4077341..4077730 + 129 145596069 - Strop_3557 - hypothetical protein 3504 71.87 0 4077831..4078868 + 345 145596070 - Strop_3558 - hypothetical protein 3505 65.13 -1 4079190..4079711 - 173 145596071 - Strop_3559 - hypothetical protein 3506 69.24 0 4079852..4080823 + 323 145596072 - Strop_3560 - hypothetical protein 3507 65.19 -1 4080944..4081486 + 180 145596073 - Strop_3561 - deaminase-reductase domain-containing protein 3508 68.45 0 4081558..4082286 - 242 145596074 - Strop_3562 - phospholipid/glycerol acyltransferase 3509 66.76 0 4082389..4084446 - 685 145596075 - Strop_3563 - Amylo-alpha-1,6-glucosidase 3510 69.62 0 4084446..4084817 - 123 145596076 - Strop_3564 - hypothetical protein 3511 64.75 -1 4084959..4085375 - 138 145596077 - Strop_3565 - CBS domain-containing protein 3512 72.83 +1 4085458..4085895 - 145 145596078 - Strop_3566 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 3513 70.08 0 4085979..4087004 - 341 145596079 - Strop_3567 - aspartate-semialdehyde dehydrogenase 3514 72.68 0 4087086..4088432 - 448 145596080 - Strop_3568 - peptidase M16 domain-containing protein 3515 70.85 0 4088429..4089718 - 429 145596081 - Strop_3569 - peptidase M16 domain-containing protein 3516 70.14 0 4089844..4090995 - 383 145596082 - Strop_3570 - hypothetical protein 3517 70.52 0 4091314..4092402 + 362 145596083 - Strop_3571 - phospho-2-dehydro-3-deoxyheptonate aldolase 3518 71.73 0 4092451..4092687 + 78 145596084 - Strop_3572 - hypothetical protein 3519 71.50 0 4092779..4092985 + 68 145596085 - Strop_3573 - hypothetical protein 3520 69.89 0 4093057..4093584 - 175 145596086 - Strop_3574 - hypothetical protein 3521 74.53 +1 4093637..4093954 - 105 145596087 - Strop_3575 - hypothetical protein 3522 72.90 +1 4093954..4094274 - 106 145596088 - Strop_3576 - hypothetical protein 3523 71.82 0 4094445..4094813 + 122 145596089 - Strop_3577 - hypothetical protein 3524 67.26 0 4094838..4095173 + 111 145596090 - Strop_3578 - hypothetical protein 3525 69.44 0 4095359..4096330 + 323 145596091 - Strop_3579 - NLP/P60 protein 3526 67.97 0 4096387..4097385 - 332 145596092 - Strop_3580 - RpoD family RNA polymerase sigma factor 3527 73.28 +1 4097807..4098517 - 236 145596093 - Strop_3581 - thymidylate kinase 3528 66.50 0 4098668..4099252 + 194 145596094 - Strop_3582 - hypothetical protein 3529 70.25 0 4099249..4099527 + 92 145596095 - Strop_3583 - hypothetical protein 3530 68.34 0 4099538..4100314 + 258 145596096 - Strop_3584 - metallophosphoesterase 3531 64.58 -1 4100305..4100448 + 47 145596097 - Strop_3585 - hypothetical protein 3532 69.94 0 4100453..4100971 + 172 145596098 - Strop_3586 - TspO/MBR family protein 3533 66.74 0 4101130..4102473 + 447 145596099 - Strop_3587 - extracellular solute-binding protein 3534 66.48 0 4102540..4103616 + 358 145596100 - Strop_3588 - binding-protein-dependent transport systems inner membrane component 3535 65.41 -1 4103620..4104573 + 317 145596101 - Strop_3589 - binding-protein-dependent transport systems inner membrane component 3536 69.54 0 4104587..4106011 - 474 145596102 - Strop_3590 - major facilitator transporter 3537 75.15 +1 4106046..4107506 - 486 145596103 - Strop_3591 - xylulokinase 3538 69.53 0 4107519..4108706 - 395 145596104 - Strop_3592 - xylose isomerase 3539 68.70 0 4108820..4110295 - 491 145596105 - Strop_3593 - undecaprenyl-phosphate galactose phosphotransferase 3540 68.92 0 4110526..4112256 - 576 145596106 - Strop_3594 - von Willebrand factor, type A 3541 71.58 0 4112340..4113479 - 379 145596107 - Strop_3595 - hypothetical protein 3542 63.33 -1 4113593..4114192 - 199 145596108 - Strop_3596 - protein of unknown function, ATP binding 3543 71.35 0 4114173..4114556 - 127 145596109 - Strop_3597 - hypothetical protein 3544 69.27 0 4114546..4114968 - 140 145596110 - Strop_3598 - roadblock/LC7 family protein 3545 70.67 0 4114968..4117493 - 841 145596111 - Strop_3599 - nitrate and nitrite sensing domain-containing protein 3546 72.44 0 4117870..4118493 + 207 145596112 - Strop_3600 - hypothetical protein 3547 70.83 0 4118486..4118869 + 127 145596113 - Strop_3601 - hypothetical protein 3548 64.73 -1 4118974..4120836 - 620 145596114 - Strop_3602 - glycoside hydrolase family protein 3549 70.70 0 4121261..4123120 + 619 145596115 - Strop_3603 - hypothetical protein 3550 67.40 0 4123122..4123799 + 225 145596116 - Strop_3604 - peptidase C60, sortase A and B 3551 67.18 0 4123854..4128911 - 1685 145596117 - Strop_3605 - NAD-glutamate dehydrogenase 3552 72.65 0 4129157..4130326 - 389 145596118 - Strop_3606 - arginase/agmatinase/formiminoglutamase 3553 70.99 0 4130390..4131292 - 300 145596119 - Strop_3607 - thioredoxin domain-containing protein 3554 68.74 0 4131406..4133094 - 562 145596120 - Strop_3608 - methylmalonyl-CoA mutase, large subunit 3555 70.91 0 4133158..4134195 - 345 145596121 - Strop_3609 - LAO/AO transport system ATPase 3556 67.75 0 4134236..4135435 - 399 145596122 - Strop_3610 - acetyl-CoA acetyltransferase 3557 69.83 0 4135813..4136286 + 157 145596123 - Strop_3611 - glyoxalase/bleomycin resistance protein/dioxygenase 3558 68.09 0 4136547..4137953 + 468 145596124 - Strop_3612 - crotonyl-CoA reductase 3559 70.56 0 4138254..4139537 + 427 145596125 - Strop_3613 - hypothetical protein 3560 70.53 0 4139699..4142128 + 809 145596126 - Strop_3614 - hypothetical protein 3561 69.33 0 4142232..4143470 + 412 145596127 - Strop_3615 - hypothetical protein 3562 72.66 0 4143467..4144267 - 266 145596128 - Strop_3616 - hypothetical protein 3563 73.58 +1 4144340..4144744 - 134 145596129 - Strop_3617 - hypothetical protein 3564 67.67 0 4144748..4146538 - 596 145596130 - Strop_3618 - 3-hydroxybutyryl-CoA dehydrogenase 3565 72.13 0 4146771..4148216 + 481 145596131 - Strop_3619 - aldehyde dehydrogenase 3566 68.18 0 4148254..4148913 - 219 145596132 - Strop_3620 - hypothetical protein 3567 70.75 0 4148968..4150974 - 668 145596133 - Strop_3621 - methylmalonyl-CoA mutase, large subunit 3568 70.68 0 4151108..4151980 + 290 145596134 - Strop_3622 - ABC transporter related 3569 67.14 0 4151977..4152819 + 280 145596135 - Strop_3623 - ABC-2 type transporter 3570 67.72 0 4152910..4153761 - 283 145596136 - Strop_3624 - 3-hydroxybutyryl-CoA dehydrogenase 3571 69.62 0 4153878..4155266 - 462 145596137 - Strop_3625 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3572 66.32 0 4155295..4155867 + 190 145596138 - Strop_3626 - ATP--cobalamin adenosyltransferase 3573 67.54 0 4156061..4156516 - 151 145596139 - Strop_3627 - hypothetical protein 3574 70.18 0 4156530..4156814 - 94 145596140 - Strop_3628 - H+-transporting two-sector ATPase, delta/epsilon subunit 3575 66.05 -1 4156930..4158066 - 378 145596141 - Strop_3629 - transcription attenuator LytR 3576 65.91 -1 4158308..4159768 - 486 145596142 - Strop_3630 - F0F1 ATP synthase subunit beta 3577 67.96 0 4159765..4160694 - 309 145596143 - Strop_3631 - ATP synthase F1, gamma subunit 3578 68.30 0 4160698..4162350 - 550 145596144 - Strop_3632 - F0F1 ATP synthase subunit alpha 3579 71.39 0 4162443..4163267 - 274 145596145 - Strop_3633 - ATP synthase F1, delta subunit 3580 70.27 0 4163267..4163794 - 175 145596146 - Strop_3634 - ATP synthase F0, B subunit 3581 69.78 0 4163826..4164050 - 74 145596147 - Strop_3635 - ATP synthase F0, C subunit 3582 62.82 -1 4164146..4164925 - 259 145596148 - Strop_3636 - ATP synthase F0, A subunit 3583 67.57 0 4164968..4165189 - 73 145596149 - Strop_3637 - hypothetical protein 3584 71.78 0 4165378..4165866 - 162 145596150 - Strop_3638 - hypothetical protein 3585 70.36 0 4166001..4168112 - 703 145596151 - Strop_3639 - glycosyl transferase family protein 3586 72.36 0 4168206..4168820 - 204 145596152 - Strop_3640 - low molecular weight phosphotyrosine protein phosphatase 3587 72.15 0 4168821..4169531 - 236 145596153 - Strop_3641 - Sua5/YciO/YrdC/YwlC family protein 3588 74.52 +1 4169574..4170503 - 309 145596154 - Strop_3642 - HemK family modification methylase 3589 73.24 +1 4170587..4172137 + 516 145596155 - Strop_3643 - diguanylate cyclase 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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