version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3364 73.27 +1 3921508..3922749 - 413 145595930 - Strop_3418 - amine oxidase 3365 70.54 0 3922739..3924883 - 714 145595931 - Strop_3419 - MMPL domain-containing protein 3366 68.54 0 3925378..3925698 + 106 145595932 - Strop_3420 - hypothetical protein 3367 66.54 0 3925658..3926467 - 269 145595933 - Strop_3421 - ABC-2 type transporter 3368 71.08 0 3926480..3927295 - 271 145595934 - Strop_3422 - ABC-2 type transporter 3369 68.70 0 3927331..3928263 - 310 145595935 - Strop_3423 - ABC transporter related 3370 74.30 +1 3928370..3928906 - 178 145595936 - Strop_3424 - hypothetical protein 3371 69.98 0 3928956..3930854 - 632 145595937 - Strop_3425 - DNA primase 3372 69.99 0 3930964..3932559 - 531 145595938 - Strop_3426 - choline/carnitine/betaine transporter 3373 73.38 +1 3932665..3933498 - 277 145595939 - Strop_3427 - siderophore-interacting protein 3374 73.06 +1 3933508..3934773 - 421 145595940 - Strop_3428 - putative deoxyguanosinetriphosphate triphosphohydrolase 3375 68.79 0 3934910..3937645 - 911 145595941 - Strop_3429 - pyruvate phosphate dikinase 3376 73.28 +1 3937947..3939701 + 584 145595942 - Strop_3430 - Beta-N-acetylhexosaminidase 3377 70.23 0 3940117..3940761 + 214 145595943 - Strop_3431 - hypothetical protein 3378 71.36 0 3940828..3941934 - 368 145595944 - Strop_3432 - nifR3 family TIM-barrel protein 3379 66.23 0 3942071..3943450 - 459 145595945 - Strop_3433 - glycyl-tRNA synthetase 3380 73.00 +1 3943561..3944034 - 157 145595946 - Strop_3434 - hypothetical protein 3381 72.81 +1 3944163..3944504 - 113 145595947 - Strop_3435 - antibiotic biosynthesis monooxygenase 3382 67.83 0 3944532..3944789 + 85 145595948 - Strop_3436 - hypothetical protein 3383 69.64 0 3944844..3945920 + 358 145595949 - Strop_3437 - periplasmic solute binding protein 3384 74.02 +1 3945917..3946678 + 253 145595950 - Strop_3438 - ABC transporter related 3385 71.23 0 3946680..3947555 + 291 145595951 - Strop_3439 - ABC-3 protein 3386 70.19 0 3947593..3947904 + 103 145595952 - Strop_3440 - regulatory protein, ArsR 3387 72.90 +1 3947909..3948838 - 309 145595953 - Strop_3441 - alpha/beta hydrolase fold 3388 69.85 0 3949021..3949617 + 198 145595954 - Strop_3442 - hypothetical protein 3389 75.35 +1 3949724..3951151 + 475 145595955 - Strop_3443 - ABC transporter related 3390 72.81 +1 3951148..3951945 + 265 145595956 - Strop_3444 - cobalt transport protein 3391 69.87 0 3952057..3953493 + 478 145595957 - Strop_3445 - 6-phosphogluconate dehydrogenase 3392 69.86 0 3953509..3954321 - 270 145595958 - Strop_3446 - undecaprenyl diphosphate synthase 3393 74.64 +1 3954327..3955166 - 279 145595959 - Strop_3447 - DNA repair protein RecO 3394 67.06 0 3955231..3956493 - 420 145595960 - Strop_3448 - acyltransferase 3 3395 68.33 0 3956552..3957451 - 299 145595961 era Strop_3449 - GTP-binding protein Era 3396 75.13 +1 3957448..3957825 - 125 145595962 - Strop_3450 - hypothetical protein 3397 70.54 0 3957818..3959212 - 464 145595963 - Strop_3451 - CBS domain-containing protein 3398 68.57 0 3959209..3959682 - 157 145595964 - Strop_3452 - putative metalloprotease 3399 68.15 0 3959700..3960842 - 380 145595965 - Strop_3453 - PhoH family protein 3400 75.37 +1 3961335..3962069 - 244 145595966 - Strop_3454 - hypothetical protein 3401 70.51 0 3962134..3963279 - 381 145595967 - Strop_3455 - chaperone protein DnaJ 3402 68.37 0 3963350..3964405 - 351 145595968 hrcA Strop_3456 - heat-inducible transcription repressor 3403 66.08 -1 3964833..3965174 + 113 145595969 - Strop_3457 - hypothetical protein 3404 73.04 +1 3965358..3966581 - 407 145595970 - Strop_3458 - putative oxygen-independent coproporphyrinogen III oxidase 3405 73.95 +1 3966601..3967383 + 260 145595971 - Strop_3459 - enoyl-CoA hydratase/isomerase 3406 70.99 0 3967555..3968409 + 284 145595972 - Strop_3460 - hypothetical protein 3407 70.53 0 3968854..3969138 - 94 145595973 - Strop_3461 - hypothetical protein 3408 66.26 0 3969303..3971255 - 650 145595974 - Strop_3462 - GTP-binding protein LepA 3409 71.34 0 3971380..3972000 - 206 145595975 - Strop_3463 - hypothetical protein 3410 74.49 +1 3972071..3973156 + 361 145595976 - Strop_3464 - aminoglycoside phosphotransferase 3411 63.30 -1 3973342..3973608 + 88 145595977 - Strop_3465 - ribosomal protein S20 3412 70.98 0 3973686..3974126 - 146 145595978 - Strop_3466 - hypothetical protein 3413 71.05 0 3974123..3975103 - 326 145595979 - Strop_3467 - DNA polymerase III, delta subunit 3414 71.75 0 3975217..3977637 - 806 145595980 - Strop_3468 - ComEC/Rec2-related protein 3415 74.50 +1 3977634..3978476 - 280 145595981 - Strop_3469 - helix-hairpin-helix repeat-containing competence protein ComEA 3416 71.43 0 3978632..3979492 - 286 145595982 - Strop_3470 - degV family protein 3417 68.21 0 3979729..3980313 - 194 145595983 - Strop_3471 - hypothetical protein 3418 70.69 0 3980679..3981299 - 206 145595984 - Strop_3472 - phosphoglycerate mutase 3419 67.17 0 3981296..3981694 - 132 145595985 - Strop_3473 - iojap-like protein 3420 66.49 0 3981804..3982370 - 188 145595986 - Strop_3474 - nicotinate (nicotinamide) nucleotide adenylyltransferase 3421 70.84 0 3982542..3985055 - 837 145595987 - Strop_3475 - aminopeptidase N 3422 68.95 0 3985121..3985339 + 72 145595988 - Strop_3476 - hypothetical protein 3423 71.91 0 3985302..3985625 + 107 145595989 - Strop_3477 - hypothetical protein 3424 67.52 0 3985738..3986208 + 156 145595990 - Strop_3478 - hypothetical protein 3425 70.75 0 3986294..3987739 - 481 145595991 obgE Strop_3479 - GTPase ObgE 3426 66.27 0 3987832..3988086 - 84 145595992 rpmA Strop_3480 - 50S ribosomal protein L27 3427 64.76 -1 3988098..3988412 - 104 145595993 - Strop_3481 - ribosomal protein L21 3428 72.46 0 3988653..3991727 - 1024 145595994 - Strop_3482 - ribonuclease 3429 70.49 0 3991858..3992484 - 208 145595995 - Strop_3483 - hypothetical protein 3430 68.42 0 3992685..3994676 - 663 145595996 - Strop_3484 - radical SAM domain-containing protein 3431 72.95 +1 3994778..3995827 + 349 145595997 - Strop_3485 - hypothetical protein 3432 70.67 0 3995905..3996603 - 232 145595998 - Strop_3486 - phospholipid/glycerol acyltransferase 3433 69.12 0 3996797..3999976 - 1059 145595999 ileS Strop_3487 - isoleucyl-tRNA synthetase 3434 71.15 0 4000313..4001875 - 520 145596000 - Strop_3488 - alkaline phosphatase 3435 66.43 0 4002029..4002454 - 141 145596001 - Strop_3489 - nucleoside-diphosphate kinase 3436 73.03 +1 4002597..4003916 + 439 145596002 - Strop_3490 - glyoxalase/bleomycin resistance protein/dioxygenase 3437 73.24 +1 4003927..4004337 - 136 145596003 - Strop_3491 - hypothetical protein 3438 70.04 0 4004334..4005668 - 444 145596004 - Strop_3492 - FolC bifunctional protein 3439 69.00 0 4005665..4008283 - 872 145596005 valS Strop_3493 - valyl-tRNA synthetase 3440 68.99 0 4008344..4009033 + 229 145596006 - Strop_3494 - hypothetical protein 3441 66.22 0 4015106..4015327 + 73 145596007 - Strop_3495 - hypothetical protein 3442 67.65 0 4015393..4016205 - 270 145596008 - Strop_3496 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3443 63.18 -1 4016295..4017584 - 429 145596009 clpX Strop_3497 - ATP-dependent protease ATP-binding subunit 3444 64.25 -1 4017787..4018449 - 220 145596010 - Strop_3498 - endopeptidase Clp 3445 65.26 -1 4018464..4019105 - 213 145596011 - Strop_3499 - endopeptidase Clp 3446 67.38 0 4019278..4020675 - 465 145596012 - Strop_3500 - trigger factor 3447 66.23 0 4021469..4021930 + 153 145596013 - Strop_3501 - hypothetical protein 3448 63.80 -1 4022185..4022916 + 243 145596014 - Strop_3502 - cell wall anchor domain-containing protein 3449 68.86 0 4023424..4024062 - 212 145596015 - Strop_3503 - hypothetical protein 3450 68.15 0 4024101..4024640 + 179 145596016 - Strop_3504 - transposase, IS4 family protein 3451 65.74 -1 4024641..4025177 - 178 145596017 - Strop_3505 - hypothetical protein 3452 68.12 0 4025666..4026490 + 274 145596018 - Strop_3506 - transcription activator, effector binding 3453 66.25 0 4026804..4027772 - 322 145596019 - Strop_3507 - alcohol dehydrogenase 3454 63.83 -1 4027783..4028064 - 93 145596020 - Strop_3508 - hypothetical protein 3455 64.39 -1 4028064..4028414 - 116 145596021 - Strop_3509 - regulatory protein, ArsR 3456 70.50 0 4028615..4028953 - 112 145596022 - Strop_3510 - hypothetical protein 3457 71.57 0 4029172..4029762 - 196 145596023 - Strop_3511 - hypothetical protein 3458 73.01 +1 4029895..4031124 + 409 145596024 - Strop_3512 - hypothetical protein 3459 76.73 +2 4031147..4031464 + 105 145596025 - Strop_3513 - hypothetical protein 3460 67.31 0 4031475..4031942 - 155 145596026 - Strop_3514 - ribose-5-phosphate isomerase B 3461 71.89 0 4032056..4033261 - 401 145596027 - Strop_3515 - hypothetical protein 3462 70.19 0 4033397..4034020 - 207 145596028 - Strop_3516 - hypothetical protein 3463 69.41 0 4034228..4036783 + 851 145596029 - Strop_3517 - aminopeptidase N 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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