version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3319 69.36 0 3867826..3868308 - 160 145595885 - Strop_3371 - regulatory protein, MarR 3320 69.30 0 3868447..3868902 - 151 145595886 - Strop_3372 - hypothetical protein 3321 68.20 0 3869042..3871780 + 912 145595887 aceE Strop_3373 - pyruvate dehydrogenase subunit E1 3322 73.38 +1 3871963..3872409 - 148 145595888 - Strop_3374 - cyclase/dehydrase 3323 68.88 0 3872610..3874007 + 465 145595889 - Strop_3375 - glutamyl-tRNA synthetase 3324 68.36 0 3874262..3874912 + 216 145595890 - Strop_3376 - hypothetical protein 3325 73.49 +1 3875360..3876781 + 473 145595891 - Strop_3377 - hypothetical protein 3326 73.76 +1 3876887..3878056 + 389 145595892 - Strop_3378 - acyl transferase domain-containing protein 3327 71.32 0 3878097..3879041 + 314 145595893 - Strop_3379 - 3-oxoacyl-(acyl carrier protein) synthase III 3328 63.33 -1 3879113..3879352 + 79 145595894 - Strop_3380 - phosphopantetheine-binding 3329 71.64 0 3879355..3880581 + 408 145595895 - Strop_3381 - beta-ketoacyl synthase 3330 72.77 +1 3880604..3882028 + 474 145595896 - Strop_3382 - propionyl-CoA carboxylase 3331 72.57 0 3882146..3882823 + 225 145595897 - Strop_3383 - hypothetical protein 3332 72.97 +1 3882858..3884585 - 575 145595898 - Strop_3384 - glycoside hydrolase family 3 protein 3333 72.76 +1 3884692..3885183 - 163 145595899 - Strop_3385 - hypothetical protein 3334 68.79 0 3885495..3885824 + 109 145595900 - Strop_3386 - hypothetical protein 3335 71.88 0 3886072..3886992 + 306 145595901 - Strop_3387 - alpha/beta hydrolase fold 3336 73.41 +1 3887101..3889221 + 706 145595902 - Strop_3388 - hypothetical protein 3337 68.08 0 3889370..3890287 + 305 145595903 - Strop_3389 - cation diffusion facilitator family transporter 3338 69.37 0 3890599..3891669 + 356 145595904 - Strop_3390 - hypothetical protein 3339 65.29 -1 3891746..3892108 - 120 145595905 - Strop_3391 - anti-anti-sigma factor 3340 68.85 0 3892652..3893200 + 182 145595906 - Strop_3392 - DSBA oxidoreductase 3341 75.84 +1 3893312..3896014 - 900 145595907 - Strop_3393 - regulatory protein, LuxR 3342 74.35 +1 3896591..3897775 + 394 145595908 - Strop_3395 - alcohol dehydrogenase 3343 73.68 +1 3897788..3898957 + 389 145595909 - Strop_3396 - saccharopine dehydrogenase (NAD(+), L-glutamate-forming) 3344 69.94 0 3899053..3900336 + 427 145595910 - Strop_3397 - seryl-tRNA synthetase 3345 70.96 0 3900636..3901637 + 333 145595911 - Strop_3398 - alcohol dehydrogenase 3346 68.39 0 3901724..3903175 - 483 145595912 - Strop_3399 - polymorphic outer membrane protein 3347 70.42 0 3903392..3904537 + 381 145595913 - Strop_3400 - peptidase M50 3348 69.75 0 3904718..3905755 - 345 145595914 - Strop_3401 - hypothetical protein 3349 67.04 0 3905755..3906024 - 89 145595915 - Strop_3402 - hypothetical protein 3350 72.45 0 3906311..3907330 - 339 145595916 - Strop_3403 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3351 68.67 0 3907354..3908001 + 215 145595917 - Strop_3404 - cupin 2 domain-containing protein 3352 67.32 0 3908125..3909039 + 304 145595918 - Strop_3405 - aldo/keto reductase 3353 65.42 -1 3909243..3910682 + 479 145595919 - Strop_3406 - parallel beta-helix repeat-containing protein 3354 64.03 -1 3910860..3912224 + 454 145595920 - Strop_3407 - hypothetical protein 3355 64.36 -1 3912499..3913884 - 461 145595921 - Strop_3408 - polymorphic outer membrane protein 3356 62.27 -2 3914159..3914545 - 128 145595922 - Strop_3409 - glyoxalase/bleomycin resistance protein/dioxygenase 3357 60.26 -2 3914545..3914934 - 129 145595923 - Strop_3410 - regulatory protein, ArsR 3358 65.93 -1 3915180..3916679 + 499 145595924 - Strop_3411 - amidase 3359 67.52 0 3917000..3917587 - 195 145595925 - Strop_3412 - hypothetical protein 3360 64.93 -1 3917897..3918241 - 114 145595926 - Strop_3413 - hypothetical protein 3361 63.60 -1 3919181..3920548 + 455 145595927 - Strop_3415 - hypothetical protein 3362 72.94 +1 3920642..3920944 + 100 145595928 - Strop_3416 - hypothetical protein 3363 66.29 0 3920988..3921251 + 87 145595929 - Strop_3417 - hypothetical protein 3364 73.27 +1 3921508..3922749 - 413 145595930 - Strop_3418 - amine oxidase 3365 70.54 0 3922739..3924883 - 714 145595931 - Strop_3419 - MMPL domain-containing protein 3366 68.54 0 3925378..3925698 + 106 145595932 - Strop_3420 - hypothetical protein 3367 66.54 0 3925658..3926467 - 269 145595933 - Strop_3421 - ABC-2 type transporter 3368 71.08 0 3926480..3927295 - 271 145595934 - Strop_3422 - ABC-2 type transporter 3369 68.70 0 3927331..3928263 - 310 145595935 - Strop_3423 - ABC transporter related 3370 74.30 +1 3928370..3928906 - 178 145595936 - Strop_3424 - hypothetical protein 3371 69.98 0 3928956..3930854 - 632 145595937 - Strop_3425 - DNA primase 3372 69.99 0 3930964..3932559 - 531 145595938 - Strop_3426 - choline/carnitine/betaine transporter 3373 73.38 +1 3932665..3933498 - 277 145595939 - Strop_3427 - siderophore-interacting protein 3374 73.06 +1 3933508..3934773 - 421 145595940 - Strop_3428 - putative deoxyguanosinetriphosphate triphosphohydrolase 3375 68.79 0 3934910..3937645 - 911 145595941 - Strop_3429 - pyruvate phosphate dikinase 3376 73.28 +1 3937947..3939701 + 584 145595942 - Strop_3430 - Beta-N-acetylhexosaminidase 3377 70.23 0 3940117..3940761 + 214 145595943 - Strop_3431 - hypothetical protein 3378 71.36 0 3940828..3941934 - 368 145595944 - Strop_3432 - nifR3 family TIM-barrel protein 3379 66.23 0 3942071..3943450 - 459 145595945 - Strop_3433 - glycyl-tRNA synthetase 3380 73.00 +1 3943561..3944034 - 157 145595946 - Strop_3434 - hypothetical protein 3381 72.81 +1 3944163..3944504 - 113 145595947 - Strop_3435 - antibiotic biosynthesis monooxygenase 3382 67.83 0 3944532..3944789 + 85 145595948 - Strop_3436 - hypothetical protein 3383 69.64 0 3944844..3945920 + 358 145595949 - Strop_3437 - periplasmic solute binding protein 3384 74.02 +1 3945917..3946678 + 253 145595950 - Strop_3438 - ABC transporter related 3385 71.23 0 3946680..3947555 + 291 145595951 - Strop_3439 - ABC-3 protein 3386 70.19 0 3947593..3947904 + 103 145595952 - Strop_3440 - regulatory protein, ArsR 3387 72.90 +1 3947909..3948838 - 309 145595953 - Strop_3441 - alpha/beta hydrolase fold 3388 69.85 0 3949021..3949617 + 198 145595954 - Strop_3442 - hypothetical protein 3389 75.35 +1 3949724..3951151 + 475 145595955 - Strop_3443 - ABC transporter related 3390 72.81 +1 3951148..3951945 + 265 145595956 - Strop_3444 - cobalt transport protein 3391 69.87 0 3952057..3953493 + 478 145595957 - Strop_3445 - 6-phosphogluconate dehydrogenase 3392 69.86 0 3953509..3954321 - 270 145595958 - Strop_3446 - undecaprenyl diphosphate synthase 3393 74.64 +1 3954327..3955166 - 279 145595959 - Strop_3447 - DNA repair protein RecO 3394 67.06 0 3955231..3956493 - 420 145595960 - Strop_3448 - acyltransferase 3 3395 68.33 0 3956552..3957451 - 299 145595961 era Strop_3449 - GTP-binding protein Era 3396 75.13 +1 3957448..3957825 - 125 145595962 - Strop_3450 - hypothetical protein 3397 70.54 0 3957818..3959212 - 464 145595963 - Strop_3451 - CBS domain-containing protein 3398 68.57 0 3959209..3959682 - 157 145595964 - Strop_3452 - putative metalloprotease 3399 68.15 0 3959700..3960842 - 380 145595965 - Strop_3453 - PhoH family protein 3400 75.37 +1 3961335..3962069 - 244 145595966 - Strop_3454 - hypothetical protein 3401 70.51 0 3962134..3963279 - 381 145595967 - Strop_3455 - chaperone protein DnaJ 3402 68.37 0 3963350..3964405 - 351 145595968 hrcA Strop_3456 - heat-inducible transcription repressor 3403 66.08 -1 3964833..3965174 + 113 145595969 - Strop_3457 - hypothetical protein 3404 73.04 +1 3965358..3966581 - 407 145595970 - Strop_3458 - putative oxygen-independent coproporphyrinogen III oxidase 3405 73.95 +1 3966601..3967383 + 260 145595971 - Strop_3459 - enoyl-CoA hydratase/isomerase 3406 70.99 0 3967555..3968409 + 284 145595972 - Strop_3460 - hypothetical protein 3407 70.53 0 3968854..3969138 - 94 145595973 - Strop_3461 - hypothetical protein 3408 66.26 0 3969303..3971255 - 650 145595974 - Strop_3462 - GTP-binding protein LepA 3409 71.34 0 3971380..3972000 - 206 145595975 - Strop_3463 - hypothetical protein 3410 74.49 +1 3972071..3973156 + 361 145595976 - Strop_3464 - aminoglycoside phosphotransferase 3411 63.30 -1 3973342..3973608 + 88 145595977 - Strop_3465 - ribosomal protein S20 3412 70.98 0 3973686..3974126 - 146 145595978 - Strop_3466 - hypothetical protein 3413 71.05 0 3974123..3975103 - 326 145595979 - Strop_3467 - DNA polymerase III, delta subunit 3414 71.75 0 3975217..3977637 - 806 145595980 - Strop_3468 - ComEC/Rec2-related protein 3415 74.50 +1 3977634..3978476 - 280 145595981 - Strop_3469 - helix-hairpin-helix repeat-containing competence protein ComEA 3416 71.43 0 3978632..3979492 - 286 145595982 - Strop_3470 - degV family protein 3417 68.21 0 3979729..3980313 - 194 145595983 - Strop_3471 - hypothetical protein 3418 70.69 0 3980679..3981299 - 206 145595984 - Strop_3472 - phosphoglycerate mutase 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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