version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 285 69.30 0 327477..328121 + 214 145592851 - Strop_0285 - phosphate uptake regulator, PhoU 286 65.19 -1 328389..329336 + 315 145592852 - Strop_0286 - phosphate binding protein 287 66.98 0 329338..330285 + 315 145592853 - Strop_0287 - phosphate ABC transporter, inner membrane subunit PstC 288 66.34 0 330282..331202 + 306 145592854 - Strop_0288 - phosphate ABC transporter, inner membrane subunit PstA 289 64.82 -1 331264..332130 + 288 145592855 - Strop_0289 - phosphate ABC transporter, ATPase subunit 290 67.99 0 332148..332903 + 251 145592856 - Strop_0290 - two component transcriptional regulator 291 72.94 +1 333066..333989 - 307 145592857 - Strop_0291 - GCN5-related N-acetyltransferase 292 71.49 0 334015..334968 - 317 145592858 - Strop_0292 - polysaccharide deacetylase 293 66.53 0 335061..335780 - 239 145592859 - Strop_0293 - winged helix family two component response transcriptional regulator 294 74.22 +1 336024..337055 + 343 145592860 - Strop_0294 - hypothetical protein 295 70.71 0 337152..337943 + 263 145592861 - Strop_0295 - hypothetical protein 296 67.66 0 338241..339146 + 301 145592862 - Strop_0296 - rhodanese domain-containing protein 297 69.42 0 339152..339478 + 108 145592863 - Strop_0297 - hypothetical protein 298 70.45 0 339696..340091 - 131 145592864 - Strop_0298 - hypothetical protein 299 60.83 -2 340295..340534 + 79 145592865 - Strop_0299 - regulatory protein GntR, HTH 300 65.00 -1 340915..341394 + 159 145592866 - Strop_0300 - hypothetical protein 301 65.40 -1 341384..342175 + 263 145592867 - Strop_0301 - pentapeptide repeat-containing protein 302 63.08 -1 342419..344425 - 668 145592868 - Strop_0302 - hypothetical protein 303 65.88 -1 345006..354827 + 3273 145592869 - Strop_0303 - YD repeat-containing protein 304 56.65 -2 354824..355342 + 172 145592870 - Strop_0304 - hypothetical protein 305 71.40 0 355558..359913 - 1451 145592871 - Strop_0305 - peptidase S8 and S53, subtilisin, kexin, sedolisin 306 70.66 0 360124..360624 + 166 145592872 - Strop_0306 - winged helix family two component response transcriptional regulator 307 74.56 +1 360680..361528 + 282 145592873 - Strop_0307 - hypothetical protein 308 66.79 0 361647..362435 + 262 145592874 - Strop_0308 - beta-lactamase domain-containing protein 309 72.00 0 362573..362947 - 124 145592875 - Strop_0309 - peroxiredoxins-like protein 310 69.37 0 363062..363652 + 196 145592876 - Strop_0310 - hypothetical protein 311 74.51 +1 363655..364521 - 288 145592877 - Strop_0311 - aminotransferase, class IV 312 69.52 0 364558..365082 + 174 145592878 - Strop_0312 - ferric uptake regulator family protein 313 73.51 +1 365079..366188 + 369 145592879 - Strop_0313 - glycine cleavage T protein (aminomethyl transferase) 314 70.94 0 366300..367142 + 280 145592880 - Strop_0314 - hypothetical protein 315 70.86 0 367170..368195 + 341 145592881 - Strop_0315 - L-asparaginase II 316 69.62 0 368320..368895 + 191 145592882 - Strop_0316 - XRE family transcriptional regulator 317 71.85 0 368998..369576 + 192 145592883 - Strop_0317 - hypothetical protein 318 66.67 0 369655..369981 + 108 145592884 - Strop_0318 - hypothetical protein 319 73.87 +1 369978..370865 + 295 145592885 - Strop_0319 - alpha/beta hydrolase fold 320 62.06 -2 371005..372090 - 361 145592886 - Strop_0320 - polymorphic membrane protein, Chlamydia 321 64.41 -1 372471..373844 - 457 145592887 - Strop_0321 - hypothetical protein 322 70.41 0 374024..374932 + 302 145592888 - Strop_0322 - hypothetical protein 323 70.44 0 374944..375792 - 282 145592889 - Strop_0323 - GCN5-related N-acetyltransferase 324 71.18 0 375831..376229 - 132 145592890 - Strop_0324 - endoribonuclease L-PSP 325 70.93 0 376321..377328 - 335 145592891 - Strop_0325 - periplasmic binding protein/LacI transcriptional regulator 326 70.09 0 377341..378741 - 466 145592892 - Strop_0326 - Beta-glucosidase 327 69.55 0 379049..379810 - 253 145592893 - Strop_0327 - hypothetical protein 328 69.05 0 379842..380972 + 376 145592894 - Strop_0328 - UDP-N-acetylenolpyruvoylglucosamine reductase 329 75.09 +1 380982..381788 - 268 145592895 - Strop_0329 - hypothetical protein 330 73.59 +1 381785..382549 - 254 145592896 - Strop_0330 - short-chain dehydrogenase/reductase SDR 331 71.01 0 382614..384062 + 482 145592897 - Strop_0331 - glycosyl transferase, group 1 332 69.63 0 384152..384724 + 190 145592898 - Strop_0332 - hypothetical protein 333 69.38 0 384799..385461 + 220 145592899 - Strop_0333 - hypothetical protein 334 70.14 0 385875..387227 - 450 145592900 - Strop_0334 - major facilitator transporter 335 68.21 0 387363..388139 + 258 145592901 - Strop_0335 - phosphoglycerate mutase 1 family protein 336 71.21 0 388340..389572 + 410 145592902 - Strop_0336 - histidine kinase 337 67.40 0 389592..390275 + 227 145592903 - Strop_0337 - two component transcriptional regulator 338 72.49 0 390360..391166 - 268 145592904 - Strop_0338 - hypothetical protein 339 73.02 +1 391240..392184 + 314 145592905 - Strop_0339 - Ppx/GppA phosphatase 340 71.95 0 392238..393146 + 302 145592906 - Strop_0340 - xylose isomerase domain-containing protein 341 67.64 0 393139..393753 - 204 145592907 - Strop_0341 - hypothetical protein 342 68.85 0 393822..394739 + 305 145592908 - Strop_0342 - proline dehydrogenase 343 68.57 0 395085..395294 + 69 145592909 - Strop_0343 - DNA binding domain-containing protein 344 63.73 -1 395497..395598 + 33 145592910 - Strop_0344 - hypothetical protein 345 72.61 0 395718..396794 + 358 145592911 - Strop_0345 - NAD-dependent epimerase/dehydratase 346 69.53 0 396791..397663 + 290 145592912 - Strop_0346 - phospholipid/glycerol acyltransferase 347 71.99 0 397733..399010 + 425 145592913 - Strop_0347 - major facilitator transporter 348 72.16 0 399039..399911 - 290 145592914 - Strop_0348 - HAD family hydrolase 349 71.53 0 400074..400958 - 294 145592915 - Strop_0349 - hypothetical protein 350 71.05 0 401222..402157 - 311 145592916 - Strop_0350 - ECF subfamily RNA polymerase sigma-24 factor 351 66.67 0 402944..403195 + 83 145592917 - Strop_0351 - glutaredoxin 2 352 68.06 0 403218..403865 + 215 145592918 - Strop_0352 - hydrolase 353 69.78 0 403935..404576 - 213 145592919 - Strop_0353 - two component LuxR family transcriptional regulator 354 71.07 0 404587..405903 - 438 145592920 - Strop_0354 - integral membrane sensor signal transduction histidine kinase 355 68.87 0 406383..407153 + 256 145592921 - Strop_0355 - redox-sensing transcriptional repressor Rex 356 72.81 +1 407150..408517 + 455 145592922 - Strop_0356 - glutamyl-tRNA reductase 357 73.17 +1 408517..409485 + 322 145592923 - Strop_0357 - porphobilinogen deaminase 358 72.49 0 409482..411062 + 526 145592924 - Strop_0358 - uroporphyrinogen III synthase HEM4 359 71.14 0 411076..412059 + 327 145592925 - Strop_0359 - delta-aminolevulinic acid dehydratase 360 70.70 0 412232..415507 - 1091 145592926 - Strop_0360 - endonuclease/exonuclease/phosphatase 361 69.66 0 415595..416596 - 333 145592927 - Strop_0361 - GCN5-related N-acetyltransferase 362 74.88 +1 416668..417945 - 425 145592928 - Strop_0362 - membrane-bound lytic murein transglycosylase B-like protein 363 71.83 0 418002..418214 + 70 145592929 - Strop_0363 - FmdB family regulatory protein 364 72.26 0 418363..421311 + 982 145592930 - Strop_0364 - adenylate cyclase 365 70.90 0 421138..421869 - 243 145592931 - Strop_0365 - methyltransferase type 11 366 70.52 0 422088..422450 + 120 145592932 - Strop_0366 - hypothetical protein 367 61.96 -2 422530..422784 + 84 145592933 - Strop_0367 - hypothetical protein 368 66.32 0 423138..423716 + 192 145592934 - Strop_0368 - integrase catalytic subunit 369 71.59 0 425098..425910 + 270 145592935 - Strop_0369 - inositol monophosphatase 370 66.27 0 426119..427126 + 335 145592936 - Strop_0370 - hypothetical protein 371 72.59 0 427163..428716 + 517 145592937 - Strop_0371 - hypothetical protein 372 68.76 0 428792..429460 - 222 145592938 - Strop_0372 - TrkA domain-containing protein 373 66.97 0 429450..430784 - 444 145592939 - Strop_0373 - H(+)-transporting two-sector ATPase 374 74.73 +1 430869..431711 + 280 145592940 - Strop_0374 - short-chain dehydrogenase/reductase SDR 375 67.40 0 431740..432555 - 271 145592941 - Strop_0375 - hypothetical protein 376 72.00 0 432662..434800 + 712 145592942 - Strop_0376 - ATP-dependent DNA helicase RecQ 377 71.94 0 434805..435221 - 138 145592943 - Strop_0377 - XRE family transcriptional regulator 378 72.39 0 435350..436555 - 401 145592944 - Strop_0378 - hypothetical protein 379 71.81 0 436657..438522 - 621 145592945 - Strop_0379 - DEAD/DEAH box helicase domain-containing protein 380 70.61 0 438890..439117 - 75 145592946 - Strop_0380 - hypothetical protein 381 69.33 0 439183..439821 - 212 145592947 - Strop_0381 - TetR family transcriptional regulator 382 75.23 +1 439967..442186 + 739 145592948 - Strop_0382 - hypothetical protein 383 67.68 0 442332..443513 + 393 145592949 - Strop_0383 - molybdopterin biosynthesis-like protein MoeZ 384 74.57 +1 443582..444454 + 290 145592950 - Strop_0384 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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