version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3205 66.73 0 3732566..3734053 - 495 145595771 - Strop_3256 - phospho-2-dehydro-3-deoxyheptonate aldolase 3206 69.51 0 3734098..3734625 - 175 145595772 - Strop_3257 - hypothetical protein 3207 65.13 -1 3734773..3736395 - 540 145595773 - Strop_3258 - glycoside hydrolase family protein 3208 64.41 -1 3736972..3737988 + 338 145595774 - Strop_3259 - alanine racemase 3209 71.24 0 3738068..3739030 - 320 145595775 - Strop_3260 - ribokinase-like domain-containing protein 3210 68.94 0 3739027..3740304 - 425 145595776 - Strop_3261 - N-acylglucosamine 2-epimerase 3211 62.75 -2 3740306..3741199 - 297 145595777 - Strop_3262 - binding-protein-dependent transport systems inner membrane component 3212 61.32 -2 3741196..3742092 - 298 145595778 - Strop_3263 - binding-protein-dependent transport systems inner membrane component 3213 68.43 0 3742197..3743447 - 416 145595779 - Strop_3264 - extracellular solute-binding protein 3214 66.46 0 3743744..3748027 + 1427 145595780 - Strop_3265 - putative alpha-1,2-mannosidase 3215 70.94 0 3748085..3748903 - 272 145595781 - Strop_3266 - pyrroline-5-carboxylate reductase 3216 67.83 0 3748976..3750004 - 342 145595782 - Strop_3267 - diphosphate--fructose-6-phosphate 1-phosphotransferase 3217 67.06 0 3750194..3750700 - 168 145595783 - Strop_3268 - hypothetical protein 3218 70.42 0 3750960..3751652 + 230 145595784 - Strop_3269 - CRP/FNR family transcriptional regulator 3219 71.14 0 3751844..3752647 + 267 145595785 - Strop_3270 - hypothetical protein 3220 70.12 0 3752911..3754329 + 472 145595786 - Strop_3271 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3221 74.79 +1 3754304..3755140 - 278 145595787 - Strop_3272 - hypothetical protein 3222 68.37 0 3755271..3756677 - 468 145595788 - Strop_3273 - flavin-containing monooxygenase FMO 3223 71.52 0 3757024..3757971 - 315 145595789 - Strop_3274 - ROK family glucokinase 3224 74.84 +1 3758041..3758664 - 207 145595790 - Strop_3275 - hypothetical protein 3225 63.96 -1 3758703..3759146 - 147 145595791 - Strop_3276 - cyclase/dehydrase 3226 69.17 0 3759273..3761072 + 599 145595792 - Strop_3277 - AMP-dependent synthetase and ligase 3227 71.22 0 3761087..3762778 + 563 145595793 - Strop_3278 - ATPase domain-containing protein 3228 69.52 0 3762786..3763451 + 221 145595794 - Strop_3279 - response regulator receiver 3229 68.27 0 3763584..3764393 + 269 145595795 - Strop_3280 - hypothetical protein 3230 70.19 0 3764386..3766143 + 585 145595796 - Strop_3281 - diguanylate cyclase 3231 72.40 0 3766202..3767335 - 377 145595797 - Strop_3282 - glycosyl transferase, group 1 3232 72.72 0 3767332..3768819 - 495 145595798 - Strop_3283 - Ste24 endopeptidase 3233 71.79 0 3768847..3769119 - 90 145595799 - Strop_3284 - hypothetical protein 3234 75.26 +1 3769275..3770834 - 519 145595800 - Strop_3285 - hypothetical protein 3235 71.00 0 3770948..3772771 + 607 145595801 - Strop_3286 - hypothetical protein 3236 68.18 0 3772895..3774682 + 595 145595802 - Strop_3287 - GTP diphosphokinase 3237 71.27 0 3774736..3775278 + 180 145595803 - Strop_3288 - NUDIX hydrolase 3238 72.76 0 3775275..3776144 + 289 145595804 - Strop_3289 - nucleotidyl transferase 3239 64.58 -1 3776181..3776468 + 95 145595805 - Strop_3290 - AsnC/Lrp family regulatory protein 3240 66.37 0 3776554..3777228 - 224 145595806 - Strop_3291 - hypothetical protein 3241 65.11 -1 3777373..3778983 - 536 145595807 - Strop_3292 - cytochrome b/b6 domain-containing protein 3242 66.57 0 3778980..3780065 - 361 145595808 - Strop_3293 - Rieske (2Fe-2S) domain-containing protein 3243 69.06 0 3780133..3780966 - 277 145595809 - Strop_3294 - cytochrome c, class I 3244 61.33 -2 3781039..3781638 - 199 145595810 - Strop_3295 - cytochrome c oxidase, subunit III 3245 70.69 0 3781746..3782714 + 322 145595811 - Strop_3296 - hypothetical protein 3246 69.44 0 3782797..3783192 + 131 145595812 - Strop_3297 - hypothetical protein 3247 72.32 0 3783272..3784333 + 353 145595813 trpD Strop_3298 - anthranilate phosphoribosyltransferase 3248 65.02 -1 3784429..3784854 - 141 145595814 - Strop_3299 - cytochrome-c oxidase 3249 66.15 0 3784865..3785836 - 323 145595815 - Strop_3300 - cytochrome c oxidase, subunit II 3250 73.18 +1 3785864..3787183 + 439 145595816 - Strop_3301 - aminotransferase, class V 3251 76.19 +2 3787180..3787410 + 76 145595817 - Strop_3302 - SirA family protein 3252 69.12 0 3787443..3788420 - 325 145595818 - Strop_3303 - ribokinase-like domain-containing protein 3253 68.60 0 3788577..3788939 - 120 145595819 - Strop_3304 - iron-sulfur cluster assembly accessory protein 3254 76.17 +2 3789077..3790213 - 378 145595820 - Strop_3305 - glycerate kinase 3255 67.75 0 3790281..3791483 + 400 145595821 - Strop_3306 - quinolinate synthetase 3256 68.78 0 3791577..3793046 + 489 145595822 - Strop_3307 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3257 69.63 0 3793193..3793732 + 179 145595823 - Strop_3308 - hypothetical protein 3258 73.79 +1 3794190..3797417 + 1075 145595824 - Strop_3309 - TPR repeat-containing protein 3259 67.07 0 3797560..3798558 + 332 145595825 - Strop_3310 - aldo/keto reductase 3260 68.89 0 3798631..3799395 - 254 145595826 - Strop_3311 - peptidase M50 3261 70.15 0 3799428..3799628 - 66 145595827 - Strop_3312 - hypothetical protein 3262 75.90 +1 3799799..3801682 + 627 145595828 - Strop_3313 - cobalbumin biosynthesis protein 3263 75.19 +1 3801672..3802445 + 257 145595829 - Strop_3314 - cobalamin-5-phosphate synthase CobS 3264 72.61 0 3802511..3803806 + 431 145595830 - Strop_3315 - hypothetical protein 3265 72.34 0 3803860..3805023 - 387 145595831 gcvT Strop_3316 - glycine cleavage system aminomethyltransferase T 3266 73.44 +1 3805146..3806711 + 521 145595832 - Strop_3317 - leucyl aminopeptidase 3267 70.18 0 3806789..3807130 - 113 145595833 - Strop_3318 - hypothetical protein 3268 67.70 0 3807237..3808682 + 481 145595834 - Strop_3319 - dihydrolipoamide dehydrogenase 3269 72.51 0 3808749..3810578 + 609 145595835 - Strop_3320 - dihydrolipoyllysine-residue succinyltransferase 3270 70.47 0 3811191..3813374 + 727 145595836 - Strop_3321 - protein of unknown function DUF893, YccS/YhfK 3271 64.23 -1 3813371..3813739 - 122 145595837 - Strop_3322 - regulatory protein, MerR 3272 69.15 0 3813870..3814877 + 335 145595838 - Strop_3323 - aldo/keto reductase 3273 73.03 +1 3814923..3815834 + 303 145595839 - Strop_3324 - hypothetical protein 3274 70.18 0 3815937..3817760 + 607 145595840 - Strop_3325 - hypothetical protein 3275 70.87 0 3817836..3818477 + 213 145595841 - Strop_3326 - lipoate-protein ligase B 3276 67.82 0 3818496..3819104 - 202 145595842 - Strop_3327 - hypothetical protein 3277 70.08 0 3819328..3820323 + 331 145595843 - Strop_3328 - lipoyl synthase 3278 73.12 +1 3820382..3821992 + 536 145595844 - Strop_3329 - hypothetical protein 3279 66.96 0 3822088..3822777 + 229 145595845 - Strop_3330 - hypothetical protein 3280 69.95 0 3822821..3823216 - 131 145595846 - Strop_3331 - RDD domain-containing protein 3281 65.61 -1 3823496..3824920 + 474 145595847 - Strop_3332 - glutamine synthetase, type I 3282 74.58 +1 3824985..3826487 - 500 145595848 - Strop_3333 - hypothetical protein 3283 74.48 +1 3826557..3828194 + 545 145595849 - Strop_3334 - hypothetical protein 3284 74.15 +1 3828277..3831324 - 1015 145595850 - Strop_3335 - glutamate-ammonia ligase adenylyltransferase 3285 72.70 0 3831321..3832115 - 264 145595851 - Strop_3336 - glutamine amidotransferase class-I 3286 73.55 +1 3832142..3833071 + 309 145595852 - Strop_3337 - peptidase U61, LD-carboxypeptidase A 3287 74.85 +1 3833208..3833696 + 162 145595853 - Strop_3338 - hypothetical protein 3288 68.22 0 3833836..3835191 - 451 145595854 - Strop_3339 - glutamine synthetase, type I 3289 69.56 0 3835390..3837186 + 598 145595855 - Strop_3340 - NAD+ synthetase 3290 70.45 0 3837344..3838189 + 281 145595856 - Strop_3341 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 3291 67.28 0 3838198..3838845 + 215 145595857 - Strop_3342 - hypothetical protein 3292 69.53 0 3839041..3839739 - 232 145595858 - Strop_3343 - NADPH-dependent F420 reductase 3293 68.67 0 3839915..3840613 - 232 145595859 - Strop_3344 - helix-turn-helix domain-containing protein 3294 64.84 -1 3840715..3841098 - 127 145595860 - Strop_3345 - glyoxalase/bleomycin resistance protein/dioxygenase 3295 72.50 0 3841186..3841974 + 262 145595861 - Strop_3346 - regulatory protein, TetR 3296 72.77 +1 3842017..3842622 - 201 145595862 - Strop_3347 - methyltransferase type 12 3297 67.86 0 3842822..3843406 - 194 145595863 - Strop_3348 - hypothetical protein 3298 66.02 -1 3845473..3845781 + 102 145595864 - Strop_3350 - transposase IS3/IS911 family protein 3299 67.01 0 3845778..3846641 + 287 145595865 - Strop_3351 - integrase catalytic subunit 3300 64.68 -1 3846805..3847056 - 83 145595866 - Strop_3352 - hypothetical protein 3301 65.81 -1 3847190..3847423 - 77 145595867 - Strop_3353 - hypothetical protein 3302 70.47 0 3848342..3849103 + 253 145595868 - Strop_3354 - hypothetical protein 3303 72.64 0 3849141..3850379 - 412 145595869 - Strop_3355 - phosphoglycerate mutase 3304 70.87 0 3850382..3851119 - 245 145595870 - Strop_3356 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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