version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3054 65.85 -1 3555371..3556225 - 284 145595620 - Strop_3103 - helix-turn-helix domain-containing protein 3055 72.10 0 3556377..3556910 + 177 145595621 - Strop_3104 - hypothetical protein 3056 71.12 0 3557214..3559055 + 613 145595622 - Strop_3105 - ATP-dependent DNA helicase RecQ 3057 62.24 -2 3559134..3559517 - 127 145595623 - Strop_3106 - PilT domain-containing protein 3058 68.06 0 3559514..3559801 - 95 145595624 - Strop_3107 - prevent-host-death family protein 3059 71.29 0 3559830..3560672 - 280 145595625 - Strop_3108 - alpha/beta hydrolase fold 3060 70.67 0 3560712..3562709 - 665 145595626 - Strop_3109 - excinuclease ABC, C subunit 3061 74.05 +1 3562780..3563280 - 166 145595627 - Strop_3110 - Rieske (2Fe-2S) domain-containing protein 3062 68.69 0 3563421..3566384 - 987 145595628 uvrA Strop_3111 - excinuclease ABC subunit A 3063 77.61 +2 3566694..3567479 - 261 145595629 - Strop_3112 - GTPase EngC 3064 74.90 +1 3567603..3568319 + 238 145595630 - Strop_3113 - mycothiol-dependent maleylpyruvate isomerase 3065 69.57 0 3568327..3568980 + 217 145595631 - Strop_3114 - beta-lactamase domain-containing protein 3066 61.57 -2 3569223..3569477 + 84 145595632 - Strop_3115 - hypothetical protein 3067 64.37 -1 3570278..3574405 + 1375 145595633 - Strop_3116 - hypothetical protein 3068 59.71 -2 3575645..3576205 - 186 145595634 - Strop_3118 - hypothetical protein 3069 67.71 0 3576297..3578495 - 732 145595635 - Strop_3119 - peptidase S1 and S6, chymotrypsin/Hap 3070 72.64 0 3578766..3580373 - 535 145595636 - Strop_3120 - FAD linked oxidase domain-containing protein 3071 72.18 0 3580413..3581174 - 253 145595637 - Strop_3121 - hypothetical protein 3072 75.04 +1 3581242..3581922 - 226 145595638 - Strop_3122 - methyltransferase small 3073 62.25 -2 3582108..3582311 + 67 145595639 - Strop_3123 - cold-shock protein, DNA-binding 3074 64.83 -1 3582542..3585148 - 868 145595640 - Strop_3124 - peptidase S1 and S6, chymotrypsin/Hap 3075 65.24 -1 3586267..3586617 + 116 145595641 - Strop_3126 - hypothetical protein 3076 73.19 +1 3586614..3588329 - 571 145595642 - Strop_3127 - peptidase S15 3077 68.29 0 3588334..3588948 - 204 145595643 - Strop_3128 - regulatory protein, MarR 3078 72.27 0 3589002..3591125 + 707 145595644 - Strop_3129 - MMPL domain-containing protein 3079 68.94 0 3591172..3592005 - 277 145595645 - Strop_3130 - lytic transglycosylase, catalytic 3080 73.66 +1 3592062..3593477 - 471 145595646 - Strop_3131 - hypothetical protein 3081 67.81 0 3593563..3595488 + 641 145595647 - Strop_3132 - GTP-binding protein TypA 3082 72.42 0 3595558..3596409 + 283 145595648 - Strop_3133 - beta-lactamase 3083 72.18 0 3596465..3597262 - 265 145595649 - Strop_3134 - hypothetical protein 3084 63.96 -1 3597466..3598464 - 332 145595650 - Strop_3135 - integral membrane protein TerC 3085 69.50 0 3598780..3599202 + 140 145595651 - Strop_3136 - antibiotic biosynthesis monooxygenase 3086 66.52 0 3599444..3601549 - 701 145595652 - Strop_3137 - excinuclease ABC subunit B 3087 73.68 +1 3601568..3603334 + 588 145595653 - Strop_3138 - hypothetical protein 3088 73.06 +1 3603368..3604384 - 338 145595654 coaE Strop_3139 - fused dephospho-CoA kinase/unknown domain-containing protein 3089 66.73 0 3604512..3605993 - 493 145595655 rpsA Strop_3140 - 30S ribosomal protein S1 3090 70.74 0 3606372..3607181 - 269 145595656 - Strop_3141 - methyltransferase type 11 3091 66.15 0 3607360..3607938 + 192 145595657 - Strop_3142 - deaminase-reductase domain-containing protein 3092 73.20 +1 3607935..3608546 - 203 145595658 - Strop_3143 - helix-turn-helix domain-containing protein 3093 68.98 0 3608770..3609201 + 143 145595659 - Strop_3144 - hypothetical protein 3094 68.56 0 3609210..3611909 - 899 145595660 - Strop_3145 - DNA polymerase I 3095 66.81 0 3612054..3612764 - 236 145595661 - Strop_3146 - ABC transporter related 3096 65.48 -1 3612754..3613677 - 307 145595662 - Strop_3147 - ABC transporter related 3097 66.84 0 3613667..3614839 - 390 145595663 - Strop_3148 - inner-membrane translocator 3098 64.51 -1 3614836..3615810 - 324 145595664 - Strop_3149 - inner-membrane translocator 3099 67.80 0 3615878..3617026 - 382 145595665 - Strop_3150 - extracellular ligand-binding receptor 3100 68.28 0 3617670..3618290 - 206 145595666 - Strop_3151 - response regulator receiver 3101 68.86 0 3618652..3619656 + 334 145595667 - Strop_3152 - RNA polymerase factor sigma-70 3102 66.78 0 3619745..3620605 + 286 145595668 - Strop_3153 - hypothetical protein 3103 70.83 0 3620718..3621197 + 159 145595669 - Strop_3154 - AsnC/Lrp family regulatory protein 3104 71.64 0 3621405..3622370 - 321 145595670 - Strop_3155 - hypothetical protein 3105 71.81 0 3622526..3623128 - 200 145595671 - Strop_3156 - Rrf2 family transcriptional regulator 3106 65.86 -1 3623179..3624300 - 373 145595672 - Strop_3157 - hypothetical protein 3107 62.96 -1 3624297..3624863 - 188 145595673 - Strop_3158 - sigma-70 region 4 domain-containing protein 3108 70.51 0 3625123..3626007 - 294 145595674 - Strop_3159 - palmitoyl-CoA hydrolase 3109 68.60 0 3626060..3627508 - 482 145595675 - Strop_3160 - pyruvate kinase 3110 69.39 0 3627884..3628729 - 281 145595676 - Strop_3161 - lipase, class 2 3111 70.26 0 3628992..3629966 + 324 145595677 - Strop_3162 - ABC transporter related 3112 68.90 0 3629966..3630817 + 283 145595678 - Strop_3163 - ABC-2 type transporter 3113 69.44 0 3630828..3631079 + 83 145595679 - Strop_3164 - helix-turn-helix domain-containing protein 3114 69.05 0 3631182..3631979 - 265 145595680 - Strop_3165 - hypothetical protein 3115 72.11 0 3632155..3633660 - 501 145595681 - Strop_3166 - glutamate synthase, NADH/NADPH, small subunit 3116 69.80 0 3633653..3638374 - 1573 145595682 - Strop_3167 - ferredoxin-dependent glutamate synthase 3117 75.34 +1 3638569..3639756 - 395 145595683 - Strop_3168 - monooxygenase, FAD-binding 3118 70.36 0 3639771..3640907 - 378 145595684 - Strop_3169 - prolipoprotein diacylglyceryl transferase 3119 71.14 0 3640975..3641778 - 267 145595685 - Strop_3170 - tryptophan synthase, alpha subunit 3120 70.40 0 3641783..3643015 - 410 145595686 - Strop_3171 - tryptophan synthase subunit beta 3121 69.80 0 3643051..3643911 - 286 145595687 - Strop_3172 - indole-3-glycerol-phosphate synthase 3122 70.51 0 3644323..3644556 + 77 145595688 - Strop_3173 - hypothetical protein 3123 77.14 +2 3644657..3645124 - 155 145595689 - Strop_3174 - hypothetical protein 3124 72.20 0 3645220..3646773 - 517 145595690 - Strop_3175 - anthranilate synthase component I 3125 72.34 0 3646770..3647210 - 146 145595691 - Strop_3176 - phosphoribosyl-AMP cyclohydrolase 3126 72.22 0 3647333..3648070 + 245 145595692 - Strop_3177 - ABC transporter related 3127 67.86 0 3648067..3648822 + 251 145595693 - Strop_3178 - multidrug ABC transporter inner membrane protein 3128 71.76 0 3648846..3649493 + 215 145595694 - Strop_3179 - regulatory protein, TetR 3129 69.60 0 3649463..3651232 - 589 145595695 - Strop_3180 - ABC transporter related 3130 71.19 0 3651353..3653230 - 625 145595696 - Strop_3181 - ABC transporter related 3131 72.70 0 3653361..3653990 + 209 145595697 - Strop_3182 - hypothetical protein 3132 68.65 0 3654090..3655397 - 435 145595698 - Strop_3183 - hypothetical protein 3133 73.11 +1 3655457..3656914 - 485 145595699 - Strop_3184 - regulatory protein GntR, HTH 3134 72.15 0 3656976..3657632 + 218 145595700 - Strop_3185 - hypothetical protein 3135 69.02 0 3657729..3658238 + 169 145595701 - Strop_3186 - hypothetical protein 3136 69.79 0 3658288..3659055 - 255 145595702 - Strop_3187 - imidazoleglycerol phosphate synthase, cyclase subunit 3137 69.45 0 3659172..3660176 - 334 145595703 - Strop_3188 - alcohol dehydrogenase 3138 68.51 0 3660182..3660616 - 144 145595704 - Strop_3189 - regulatory protein, MarR 3139 71.49 0 3660790..3661515 - 241 145595705 - Strop_3190 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3140 73.46 +1 3661532..3661855 - 107 145595706 - Strop_3191 - hypothetical protein 3141 71.62 0 3661852..3662517 - 221 145595707 hisH Strop_3192 - imidazole glycerol phosphate synthase subunit HisH 3142 71.26 0 3662514..3662687 - 57 145595708 - Strop_3193 - hypothetical protein 3143 67.32 0 3662719..3663330 - 203 145595709 - Strop_3194 - imidazoleglycerol-phosphate dehydratase 3144 70.38 0 3663327..3664403 - 358 145595710 - Strop_3195 - histidinol-phosphate aminotransferase 3145 71.12 0 3664400..3665770 - 456 145595711 hisD Strop_3196 - histidinol dehydrogenase 3146 71.53 0 3665830..3666528 + 232 145595712 - Strop_3197 - peptidase S16, lon domain-containing protein 3147 73.19 +1 3666443..3667270 - 275 145595713 - Strop_3198 - hypothetical protein 3148 71.04 0 3667327..3668790 - 487 145595714 - Strop_3199 - hypothetical protein 3149 71.09 0 3668833..3670008 - 391 145595715 - Strop_3200 - hypothetical protein 3150 68.78 0 3670057..3671001 - 314 145595716 - Strop_3201 - RluA family pseudouridine synthase 3151 71.24 0 3670998..3671696 - 232 145595717 - Strop_3202 - lipoprotein signal peptidase 3152 68.57 0 3671760..3672179 - 139 145595718 - Strop_3203 - zinc finger, DksA/TraR C4-type 3153 70.72 0 3672730..3673050 - 106 145595719 - Strop_3204 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0