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Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3021 77.32 +2 3520949..3521455 + 168 145595587 - Strop_3069 - hypothetical protein 3022 75.69 +1 3521497..3522261 + 254 145595588 - Strop_3070 - short-chain dehydrogenase/reductase SDR 3023 68.99 0 3522302..3524278 - 658 145595589 - Strop_3071 - ABC transporter related 3024 72.27 0 3524400..3525167 - 255 145595590 - Strop_3072 - enoyl-CoA hydratase/isomerase 3025 69.74 0 3525208..3525435 - 75 145595591 - Strop_3073 - hypothetical protein 3026 69.50 0 3525588..3527246 - 552 145595592 - Strop_3074 - ABC transporter related 3027 74.47 +1 3527268..3528254 + 328 145595593 - Strop_3075 - hypothetical protein 3028 74.34 +1 3528126..3528803 - 225 145595594 - Strop_3076 - lysine exporter protein LysE/YggA 3029 70.02 0 3528979..3529395 - 138 145595595 - Strop_3077 - hypothetical protein 3030 69.18 0 3529392..3529868 - 158 145595596 - Strop_3078 - NifU family SUF system FeS assembly protein 3031 67.66 0 3529868..3531172 - 434 145595597 - Strop_3079 - SufS subfamily cysteine desulfurase 3032 68.48 0 3531198..3531971 - 257 145595598 - Strop_3080 - FeS assembly ATPase SufC 3033 68.70 0 3531971..3532315 - 114 145595599 - Strop_3081 - Rieske (2Fe-2S) domain-containing protein 3034 71.60 0 3532315..3533511 - 398 145595600 - Strop_3082 - FeS assembly protein SufD 3035 65.13 -1 3533590..3535020 - 476 145595601 - Strop_3083 - FeS assembly protein SufB 3036 74.03 +1 3535017..3535763 - 248 145595602 - Strop_3084 - regulatory protein, ArsR 3037 71.97 0 3535871..3536851 + 326 145595603 - Strop_3085 - cytochrome oxidase assembly 3038 71.43 0 3536997..3537920 - 307 145595604 - Strop_3086 - hypothetical protein 3039 68.03 0 3537931..3538296 - 121 145595605 - Strop_3087 - hypothetical protein 3040 69.39 0 3538520..3539548 - 342 145595606 - Strop_3088 - protoheme IX farnesyltransferase 3041 69.63 0 3539652..3541877 + 741 145595607 - Strop_3089 - transketolase 3042 69.89 0 3541893..3543071 + 392 145595608 - Strop_3090 - transaldolase 3043 71.88 0 3543068..3544735 + 555 145595609 - Strop_3091 - phosphoglucose isomerase (PGI) 3044 68.97 0 3544767..3546284 + 505 145595610 - Strop_3092 - glucose-6-phosphate 1-dehydrogenase 3045 72.19 0 3546319..3547332 + 337 145595611 - Strop_3093 - hypothetical protein 3046 74.32 +1 3547329..3548099 + 256 145595612 - Strop_3094 - 6-phosphogluconolactonase 3047 62.45 -2 3548186..3548446 - 86 145595613 - Strop_3095 - preprotein translocase, SecG subunit 3048 69.44 0 3548543..3549334 - 263 145595614 - Strop_3096 - Triose-phosphate isomerase 3049 71.92 0 3549335..3550534 - 399 145595615 - Strop_3097 - phosphoglycerate kinase 3050 67.06 0 3550587..3551591 - 334 145595616 - Strop_3098 - glyceraldehyde-3-phosphate dehydrogenase, type I 3051 73.19 +1 3551857..3552837 - 326 145595617 - Strop_3099 - hypothetical protein 3052 73.59 +1 3552892..3553887 - 331 145595618 - Strop_3100 - protein of unknown function UPF0052 and CofD 3053 69.86 0 3553884..3554792 - 302 145595619 - Strop_3101 - hypothetical protein 3054 65.85 -1 3555371..3556225 - 284 145595620 - Strop_3103 - helix-turn-helix domain-containing protein 3055 72.10 0 3556377..3556910 + 177 145595621 - Strop_3104 - hypothetical protein 3056 71.12 0 3557214..3559055 + 613 145595622 - Strop_3105 - ATP-dependent DNA helicase RecQ 3057 62.24 -2 3559134..3559517 - 127 145595623 - Strop_3106 - PilT domain-containing protein 3058 68.06 0 3559514..3559801 - 95 145595624 - Strop_3107 - prevent-host-death family protein 3059 71.29 0 3559830..3560672 - 280 145595625 - Strop_3108 - alpha/beta hydrolase fold 3060 70.67 0 3560712..3562709 - 665 145595626 - Strop_3109 - excinuclease ABC, C subunit 3061 74.05 +1 3562780..3563280 - 166 145595627 - Strop_3110 - Rieske (2Fe-2S) domain-containing protein 3062 68.69 0 3563421..3566384 - 987 145595628 uvrA Strop_3111 - excinuclease ABC subunit A 3063 77.61 +2 3566694..3567479 - 261 145595629 - Strop_3112 - GTPase EngC 3064 74.90 +1 3567603..3568319 + 238 145595630 - Strop_3113 - mycothiol-dependent maleylpyruvate isomerase 3065 69.57 0 3568327..3568980 + 217 145595631 - Strop_3114 - beta-lactamase domain-containing protein 3066 61.57 -2 3569223..3569477 + 84 145595632 - Strop_3115 - hypothetical protein 3067 64.37 -1 3570278..3574405 + 1375 145595633 - Strop_3116 - hypothetical protein 3068 59.71 -2 3575645..3576205 - 186 145595634 - Strop_3118 - hypothetical protein 3069 67.71 0 3576297..3578495 - 732 145595635 - Strop_3119 - peptidase S1 and S6, chymotrypsin/Hap 3070 72.64 0 3578766..3580373 - 535 145595636 - Strop_3120 - FAD linked oxidase domain-containing protein 3071 72.18 0 3580413..3581174 - 253 145595637 - Strop_3121 - hypothetical protein 3072 75.04 +1 3581242..3581922 - 226 145595638 - Strop_3122 - methyltransferase small 3073 62.25 -2 3582108..3582311 + 67 145595639 - Strop_3123 - cold-shock protein, DNA-binding 3074 64.83 -1 3582542..3585148 - 868 145595640 - Strop_3124 - peptidase S1 and S6, chymotrypsin/Hap 3075 65.24 -1 3586267..3586617 + 116 145595641 - Strop_3126 - hypothetical protein 3076 73.19 +1 3586614..3588329 - 571 145595642 - Strop_3127 - peptidase S15 3077 68.29 0 3588334..3588948 - 204 145595643 - Strop_3128 - regulatory protein, MarR 3078 72.27 0 3589002..3591125 + 707 145595644 - Strop_3129 - MMPL domain-containing protein 3079 68.94 0 3591172..3592005 - 277 145595645 - Strop_3130 - lytic transglycosylase, catalytic 3080 73.66 +1 3592062..3593477 - 471 145595646 - Strop_3131 - hypothetical protein 3081 67.81 0 3593563..3595488 + 641 145595647 - Strop_3132 - GTP-binding protein TypA 3082 72.42 0 3595558..3596409 + 283 145595648 - Strop_3133 - beta-lactamase 3083 72.18 0 3596465..3597262 - 265 145595649 - Strop_3134 - hypothetical protein 3084 63.96 -1 3597466..3598464 - 332 145595650 - Strop_3135 - integral membrane protein TerC 3085 69.50 0 3598780..3599202 + 140 145595651 - Strop_3136 - antibiotic biosynthesis monooxygenase 3086 66.52 0 3599444..3601549 - 701 145595652 - Strop_3137 - excinuclease ABC subunit B 3087 73.68 +1 3601568..3603334 + 588 145595653 - Strop_3138 - hypothetical protein 3088 73.06 +1 3603368..3604384 - 338 145595654 coaE Strop_3139 - fused dephospho-CoA kinase/unknown domain-containing protein 3089 66.73 0 3604512..3605993 - 493 145595655 rpsA Strop_3140 - 30S ribosomal protein S1 3090 70.74 0 3606372..3607181 - 269 145595656 - Strop_3141 - methyltransferase type 11 3091 66.15 0 3607360..3607938 + 192 145595657 - Strop_3142 - deaminase-reductase domain-containing protein 3092 73.20 +1 3607935..3608546 - 203 145595658 - Strop_3143 - helix-turn-helix domain-containing protein 3093 68.98 0 3608770..3609201 + 143 145595659 - Strop_3144 - hypothetical protein 3094 68.56 0 3609210..3611909 - 899 145595660 - Strop_3145 - DNA polymerase I 3095 66.81 0 3612054..3612764 - 236 145595661 - Strop_3146 - ABC transporter related 3096 65.48 -1 3612754..3613677 - 307 145595662 - Strop_3147 - ABC transporter related 3097 66.84 0 3613667..3614839 - 390 145595663 - Strop_3148 - inner-membrane translocator 3098 64.51 -1 3614836..3615810 - 324 145595664 - Strop_3149 - inner-membrane translocator 3099 67.80 0 3615878..3617026 - 382 145595665 - Strop_3150 - extracellular ligand-binding receptor 3100 68.28 0 3617670..3618290 - 206 145595666 - Strop_3151 - response regulator receiver 3101 68.86 0 3618652..3619656 + 334 145595667 - Strop_3152 - RNA polymerase factor sigma-70 3102 66.78 0 3619745..3620605 + 286 145595668 - Strop_3153 - hypothetical protein 3103 70.83 0 3620718..3621197 + 159 145595669 - Strop_3154 - AsnC/Lrp family regulatory protein 3104 71.64 0 3621405..3622370 - 321 145595670 - Strop_3155 - hypothetical protein 3105 71.81 0 3622526..3623128 - 200 145595671 - Strop_3156 - Rrf2 family transcriptional regulator 3106 65.86 -1 3623179..3624300 - 373 145595672 - Strop_3157 - hypothetical protein 3107 62.96 -1 3624297..3624863 - 188 145595673 - Strop_3158 - sigma-70 region 4 domain-containing protein 3108 70.51 0 3625123..3626007 - 294 145595674 - Strop_3159 - palmitoyl-CoA hydrolase 3109 68.60 0 3626060..3627508 - 482 145595675 - Strop_3160 - pyruvate kinase 3110 69.39 0 3627884..3628729 - 281 145595676 - Strop_3161 - lipase, class 2 3111 70.26 0 3628992..3629966 + 324 145595677 - Strop_3162 - ABC transporter related 3112 68.90 0 3629966..3630817 + 283 145595678 - Strop_3163 - ABC-2 type transporter 3113 69.44 0 3630828..3631079 + 83 145595679 - Strop_3164 - helix-turn-helix domain-containing protein 3114 69.05 0 3631182..3631979 - 265 145595680 - Strop_3165 - hypothetical protein 3115 72.11 0 3632155..3633660 - 501 145595681 - Strop_3166 - glutamate synthase, NADH/NADPH, small subunit 3116 69.80 0 3633653..3638374 - 1573 145595682 - Strop_3167 - ferredoxin-dependent glutamate synthase 3117 75.34 +1 3638569..3639756 - 395 145595683 - Strop_3168 - monooxygenase, FAD-binding 3118 70.36 0 3639771..3640907 - 378 145595684 - Strop_3169 - prolipoprotein diacylglyceryl transferase 3119 71.14 0 3640975..3641778 - 267 145595685 - Strop_3170 - tryptophan synthase, alpha subunit 3120 70.40 0 3641783..3643015 - 410 145595686 - Strop_3171 - tryptophan synthase subunit beta 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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