version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2989 67.59 0 3468422..3469504 + 360 145595555 - Strop_3037 - chitin-binding domain-containing protein 2990 64.07 -1 3469602..3470063 - 153 145595556 - Strop_3038 - hypothetical protein 2991 64.99 -1 3470076..3470672 - 198 145595557 - Strop_3039 - sigma-70 region 2 domain-containing protein 2992 67.85 0 3470672..3471850 - 392 145595558 - Strop_3040 - peptidase S8 and S53, subtilisin, kexin, sedolisin 2993 72.05 0 3472079..3474751 + 890 145595559 - Strop_3041 - tetratricopeptide TPR_4 2994 68.78 0 3475046..3475660 + 204 145595560 - Strop_3042 - NADPH-dependent FMN reductase 2995 68.67 0 3475691..3475939 + 82 145595561 - Strop_3043 - hypothetical protein 2996 69.06 0 3475927..3477726 + 599 145595562 - Strop_3044 - hypothetical protein 2997 72.37 0 3477729..3480164 + 811 145595563 - Strop_3045 - lantibiotic dehydratase domain-containing protein 2998 70.91 0 3480161..3482446 + 761 145595564 - Strop_3046 - lantibiotic dehydratase domain-containing protein 2999 71.90 0 3482443..3483912 + 489 145595565 - Strop_3047 - hypothetical protein 3000 70.71 0 3483909..3486158 + 749 145595566 - Strop_3048 - lantibiotic dehydratase domain-containing protein 3001 71.75 0 3486155..3487414 + 419 145595567 - Strop_3049 - peptidase U62, modulator of DNA gyrase 3002 72.79 +1 3487407..3488483 + 358 145595568 - Strop_3050 - hypothetical protein 3003 71.66 0 3488458..3489558 + 366 145595569 - Strop_3051 - FAD dependent oxidoreductase 3004 72.02 0 3489558..3490229 + 223 145595570 - Strop_3052 - hypothetical protein 3005 72.62 0 3490262..3491470 - 402 145595571 - Strop_3053 - amidohydrolase 3006 71.79 0 3491572..3494067 + 831 145595572 - Strop_3054 - lantibiotic dehydratase domain-containing protein 3007 68.88 0 3494094..3494951 + 285 145595573 - Strop_3055 - methyltransferase type 11 3008 70.50 0 3495062..3502192 + 2376 145595574 - Strop_3056 - thioester reductase domain-containing protein 3009 66.97 0 3502319..3504280 - 653 145595575 - Strop_3057 - asparagine synthase (glutamine-hydrolyzing) 3010 70.25 0 3504401..3505879 + 492 145595576 - Strop_3058 - Xaa-Pro aminopeptidase 3011 69.02 0 3506161..3507732 + 523 145595577 - Strop_3059 - hypothetical protein 3012 67.11 0 3508078..3510099 + 673 145595578 - Strop_3060 - hypothetical protein 3013 69.90 0 3510166..3513006 - 946 145595579 - Strop_3061 - alpha-1,6-glucosidase, pullulanase-type 3014 68.99 0 3513294..3516128 + 944 145595580 - Strop_3062 - aconitate hydratase 1 3015 70.21 0 3516255..3516536 + 93 145595581 - Strop_3063 - hypothetical protein 3016 69.80 0 3516645..3517571 - 308 145595582 - Strop_3064 - protein of unknown function RIO1 3017 69.92 0 3517727..3518371 - 214 145595583 - Strop_3065 - HAD family hydrolase 3018 70.86 0 3518566..3519138 + 190 145595584 - Strop_3066 - TetR family transcriptional regulator 3019 70.08 0 3519229..3520137 + 302 145595585 - Strop_3067 - hypothetical protein 3020 72.53 0 3520134..3520952 + 272 145595586 - Strop_3068 - hypothetical protein 3021 77.32 +2 3520949..3521455 + 168 145595587 - Strop_3069 - hypothetical protein 3022 75.69 +1 3521497..3522261 + 254 145595588 - Strop_3070 - short-chain dehydrogenase/reductase SDR 3023 68.99 0 3522302..3524278 - 658 145595589 - Strop_3071 - ABC transporter related 3024 72.27 0 3524400..3525167 - 255 145595590 - Strop_3072 - enoyl-CoA hydratase/isomerase 3025 69.74 0 3525208..3525435 - 75 145595591 - Strop_3073 - hypothetical protein 3026 69.50 0 3525588..3527246 - 552 145595592 - Strop_3074 - ABC transporter related 3027 74.47 +1 3527268..3528254 + 328 145595593 - Strop_3075 - hypothetical protein 3028 74.34 +1 3528126..3528803 - 225 145595594 - Strop_3076 - lysine exporter protein LysE/YggA 3029 70.02 0 3528979..3529395 - 138 145595595 - Strop_3077 - hypothetical protein 3030 69.18 0 3529392..3529868 - 158 145595596 - Strop_3078 - NifU family SUF system FeS assembly protein 3031 67.66 0 3529868..3531172 - 434 145595597 - Strop_3079 - SufS subfamily cysteine desulfurase 3032 68.48 0 3531198..3531971 - 257 145595598 - Strop_3080 - FeS assembly ATPase SufC 3033 68.70 0 3531971..3532315 - 114 145595599 - Strop_3081 - Rieske (2Fe-2S) domain-containing protein 3034 71.60 0 3532315..3533511 - 398 145595600 - Strop_3082 - FeS assembly protein SufD 3035 65.13 -1 3533590..3535020 - 476 145595601 - Strop_3083 - FeS assembly protein SufB 3036 74.03 +1 3535017..3535763 - 248 145595602 - Strop_3084 - regulatory protein, ArsR 3037 71.97 0 3535871..3536851 + 326 145595603 - Strop_3085 - cytochrome oxidase assembly 3038 71.43 0 3536997..3537920 - 307 145595604 - Strop_3086 - hypothetical protein 3039 68.03 0 3537931..3538296 - 121 145595605 - Strop_3087 - hypothetical protein 3040 69.39 0 3538520..3539548 - 342 145595606 - Strop_3088 - protoheme IX farnesyltransferase 3041 69.63 0 3539652..3541877 + 741 145595607 - Strop_3089 - transketolase 3042 69.89 0 3541893..3543071 + 392 145595608 - Strop_3090 - transaldolase 3043 71.88 0 3543068..3544735 + 555 145595609 - Strop_3091 - phosphoglucose isomerase (PGI) 3044 68.97 0 3544767..3546284 + 505 145595610 - Strop_3092 - glucose-6-phosphate 1-dehydrogenase 3045 72.19 0 3546319..3547332 + 337 145595611 - Strop_3093 - hypothetical protein 3046 74.32 +1 3547329..3548099 + 256 145595612 - Strop_3094 - 6-phosphogluconolactonase 3047 62.45 -2 3548186..3548446 - 86 145595613 - Strop_3095 - preprotein translocase, SecG subunit 3048 69.44 0 3548543..3549334 - 263 145595614 - Strop_3096 - Triose-phosphate isomerase 3049 71.92 0 3549335..3550534 - 399 145595615 - Strop_3097 - phosphoglycerate kinase 3050 67.06 0 3550587..3551591 - 334 145595616 - Strop_3098 - glyceraldehyde-3-phosphate dehydrogenase, type I 3051 73.19 +1 3551857..3552837 - 326 145595617 - Strop_3099 - hypothetical protein 3052 73.59 +1 3552892..3553887 - 331 145595618 - Strop_3100 - protein of unknown function UPF0052 and CofD 3053 69.86 0 3553884..3554792 - 302 145595619 - Strop_3101 - hypothetical protein 3054 65.85 -1 3555371..3556225 - 284 145595620 - Strop_3103 - helix-turn-helix domain-containing protein 3055 72.10 0 3556377..3556910 + 177 145595621 - Strop_3104 - hypothetical protein 3056 71.12 0 3557214..3559055 + 613 145595622 - Strop_3105 - ATP-dependent DNA helicase RecQ 3057 62.24 -2 3559134..3559517 - 127 145595623 - Strop_3106 - PilT domain-containing protein 3058 68.06 0 3559514..3559801 - 95 145595624 - Strop_3107 - prevent-host-death family protein 3059 71.29 0 3559830..3560672 - 280 145595625 - Strop_3108 - alpha/beta hydrolase fold 3060 70.67 0 3560712..3562709 - 665 145595626 - Strop_3109 - excinuclease ABC, C subunit 3061 74.05 +1 3562780..3563280 - 166 145595627 - Strop_3110 - Rieske (2Fe-2S) domain-containing protein 3062 68.69 0 3563421..3566384 - 987 145595628 uvrA Strop_3111 - excinuclease ABC subunit A 3063 77.61 +2 3566694..3567479 - 261 145595629 - Strop_3112 - GTPase EngC 3064 74.90 +1 3567603..3568319 + 238 145595630 - Strop_3113 - mycothiol-dependent maleylpyruvate isomerase 3065 69.57 0 3568327..3568980 + 217 145595631 - Strop_3114 - beta-lactamase domain-containing protein 3066 61.57 -2 3569223..3569477 + 84 145595632 - Strop_3115 - hypothetical protein 3067 64.37 -1 3570278..3574405 + 1375 145595633 - Strop_3116 - hypothetical protein 3068 59.71 -2 3575645..3576205 - 186 145595634 - Strop_3118 - hypothetical protein 3069 67.71 0 3576297..3578495 - 732 145595635 - Strop_3119 - peptidase S1 and S6, chymotrypsin/Hap 3070 72.64 0 3578766..3580373 - 535 145595636 - Strop_3120 - FAD linked oxidase domain-containing protein 3071 72.18 0 3580413..3581174 - 253 145595637 - Strop_3121 - hypothetical protein 3072 75.04 +1 3581242..3581922 - 226 145595638 - Strop_3122 - methyltransferase small 3073 62.25 -2 3582108..3582311 + 67 145595639 - Strop_3123 - cold-shock protein, DNA-binding 3074 64.83 -1 3582542..3585148 - 868 145595640 - Strop_3124 - peptidase S1 and S6, chymotrypsin/Hap 3075 65.24 -1 3586267..3586617 + 116 145595641 - Strop_3126 - hypothetical protein 3076 73.19 +1 3586614..3588329 - 571 145595642 - Strop_3127 - peptidase S15 3077 68.29 0 3588334..3588948 - 204 145595643 - Strop_3128 - regulatory protein, MarR 3078 72.27 0 3589002..3591125 + 707 145595644 - Strop_3129 - MMPL domain-containing protein 3079 68.94 0 3591172..3592005 - 277 145595645 - Strop_3130 - lytic transglycosylase, catalytic 3080 73.66 +1 3592062..3593477 - 471 145595646 - Strop_3131 - hypothetical protein 3081 67.81 0 3593563..3595488 + 641 145595647 - Strop_3132 - GTP-binding protein TypA 3082 72.42 0 3595558..3596409 + 283 145595648 - Strop_3133 - beta-lactamase 3083 72.18 0 3596465..3597262 - 265 145595649 - Strop_3134 - hypothetical protein 3084 63.96 -1 3597466..3598464 - 332 145595650 - Strop_3135 - integral membrane protein TerC 3085 69.50 0 3598780..3599202 + 140 145595651 - Strop_3136 - antibiotic biosynthesis monooxygenase 3086 66.52 0 3599444..3601549 - 701 145595652 - Strop_3137 - excinuclease ABC subunit B 3087 73.68 +1 3601568..3603334 + 588 145595653 - Strop_3138 - hypothetical protein 3088 73.06 +1 3603368..3604384 - 338 145595654 coaE Strop_3139 - fused dephospho-CoA kinase/unknown domain-containing protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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