version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2923 67.54 0 3399305..3400222 + 305 145595489 - Strop_2970 - short-chain dehydrogenase/reductase SDR 2924 68.16 0 3400348..3401685 - 445 145595490 - Strop_2971 - major facilitator transporter 2925 66.47 0 3401861..3402862 + 333 145595491 - Strop_2972 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2926 68.76 0 3402918..3403826 + 302 145595492 - Strop_2973 - haloalkane dehalogenase 2927 68.52 0 3404019..3404450 + 143 145595493 - Strop_2974 - hypothetical protein 2928 68.52 0 3404497..3404766 + 89 145595494 - Strop_2975 - hypothetical protein 2929 65.81 -1 3404778..3405479 - 233 145595495 - Strop_2976 - hydrolase 2930 69.26 0 3405697..3406506 + 269 145595496 - Strop_2977 - membrane-bound metal-dependent hydrolase 2931 73.83 +1 3406512..3407405 + 297 145595497 - Strop_2978 - amidohydrolase 2 2932 70.20 0 3407406..3407999 - 197 145595498 - Strop_2979 - hypothetical protein 2933 74.59 +1 3408210..3409988 - 592 145595499 - Strop_2980 - DNA-directed DNA polymerase 2934 64.27 -1 3410015..3410974 - 319 145595500 - Strop_2981 - binding-protein-dependent transport systems inner membrane component 2935 63.48 -1 3410987..3411928 - 313 145595501 - Strop_2982 - binding-protein-dependent transport systems inner membrane component 2936 66.38 0 3411952..3413355 - 467 145595502 - Strop_2983 - extracellular solute-binding protein 2937 73.44 +1 3413455..3414414 - 319 145595503 - Strop_2984 - sugar isomerase (SIS) 2938 67.52 0 3415017..3415601 + 194 145595504 - Strop_2985 - hypothetical protein 2939 67.87 0 3415749..3416993 - 414 145595505 - Strop_2986 - 3-phosphoshikimate 1-carboxyvinyltransferase 2940 67.86 0 3417077..3419344 - 755 145595506 - Strop_2987 - MMPL domain-containing protein 2941 66.51 0 3419436..3420068 - 210 145595507 - Strop_2988 - regulatory protein, TetR 2942 65.84 -1 3420199..3420441 - 80 145595508 - Strop_2989 - hypothetical protein 2943 66.05 -1 3420581..3420904 + 107 145595509 - Strop_2990 - hypothetical protein 2944 72.67 0 3421239..3422654 + 471 145595510 - Strop_2991 - acyltransferase 3 2945 71.09 0 3422626..3424116 - 496 145595511 - Strop_2992 - methylmalonate-semialdehyde dehydrogenase 2946 69.34 0 3424113..3425423 - 436 145595512 - Strop_2993 - aminotransferase class-III 2947 62.85 -1 3425647..3426039 + 130 145595513 - Strop_2994 - helix-turn-helix, HxlR type 2948 65.93 -1 3426040..3426447 - 135 145595514 - Strop_2995 - endoribonuclease L-PSP 2949 70.92 0 3426766..3427587 - 273 145595515 - Strop_2996 - methyltransferase type 11 2950 69.40 0 3427800..3428639 + 279 145595516 - Strop_2997 - NmrA family protein 2951 67.94 0 3428709..3429494 - 261 145595517 - Strop_2998 - short-chain dehydrogenase/reductase SDR 2952 72.40 0 3429571..3430581 - 336 145595518 - Strop_2999 - regulatory protein, MerR 2953 69.01 0 3430575..3431258 - 227 145595519 - Strop_3000 - hypothetical protein 2954 72.55 0 3431392..3432444 + 350 145595520 - Strop_3001 - asparaginase/glutaminase 2955 71.87 0 3432527..3433276 - 249 145595521 - Strop_3002 - NmrA family protein 2956 69.47 0 3433974..3434687 + 237 145595522 - Strop_3004 - cyclase family protein 2957 73.20 +1 3434756..3436102 - 448 145595523 murD Strop_3005 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2958 70.52 0 3436188..3437561 + 457 145595524 - Strop_3006 - hypothetical protein 2959 74.20 +1 3437530..3439320 - 596 145595525 - Strop_3007 - purine catabolism PurC domain-containing protein 2960 73.91 +1 3439431..3440396 - 321 145595526 - Strop_3008 - tRNA/rRNA methyltransferase (SpoU) 2961 69.30 0 3440444..3440785 - 113 145595527 - Strop_3009 - hypothetical protein 2962 67.06 0 3440806..3441315 - 169 145595528 - Strop_3010 - hypothetical protein 2963 64.53 -1 3441859..3443259 + 466 145595529 - Strop_3011 - polymorphic membrane protein, Chlamydia 2964 64.81 -1 3443304..3443573 + 89 145595530 - Strop_3012 - hypothetical protein 2965 69.12 0 3443655..3444347 - 230 145595531 - Strop_3013 - hypothetical protein 2966 67.71 0 3444572..3446194 - 540 145595532 - Strop_3014 - cobalamin synthesis protein, P47K 2967 70.31 0 3446693..3448969 - 758 145595533 - Strop_3015 - glycosyl transferase family protein 2968 61.56 -2 3449056..3449505 - 149 145595534 - Strop_3016 - alkylhydroperoxidase 2969 73.06 +1 3449667..3450479 - 270 145595535 - Strop_3017 - hypothetical protein 2970 68.02 0 3450618..3451727 - 369 145595536 - Strop_3018 - band 7 protein 2971 67.26 0 3451732..3452235 - 167 145595537 - Strop_3019 - hypothetical protein 2972 71.32 0 3452295..3453110 - 271 145595538 - Strop_3020 - hypothetical protein 2973 77.23 +2 3453309..3454103 + 264 145595539 - Strop_3021 - hypothetical protein 2974 68.08 0 3454136..3454915 - 259 145595540 - Strop_3022 - HAD family hydrolase 2975 71.75 0 3454948..3456030 - 360 145595541 hemH Strop_3023 - ferrochelatase 2976 71.88 0 3456087..3456854 - 255 145595542 - Strop_3024 - enoyl-(acyl carrier protein) reductase 2977 68.97 0 3456869..3457606 - 245 145595543 - Strop_3025 - 3-oxoacyl-(acyl-carrier-protein) reductase 2978 70.98 0 3458208..3459158 - 316 145595544 - Strop_3026 - von Willebrand factor, type A 2979 75.00 +1 3459155..3460174 - 339 145595545 - Strop_3027 - hypothetical protein 2980 70.53 0 3460153..3461265 - 370 145595546 - Strop_3028 - ATPase 2981 69.10 0 3461318..3461728 + 136 145595547 - Strop_3029 - hypothetical protein 2982 72.86 +1 3461751..3462299 + 182 145595548 - Strop_3030 - membrane-flanked domain-containing protein 2983 72.12 0 3462296..3463726 + 476 145595549 - Strop_3031 - membrane-flanked domain-containing protein 2984 69.81 0 3463763..3464842 - 359 145595550 - Strop_3032 - phosphoesterase, PA-phosphatase related 2985 72.33 0 3464892..3465350 + 152 145595551 - Strop_3033 - thioesterase superfamily protein 2986 72.10 0 3465347..3466174 + 275 145595552 - Strop_3034 - beta-lactamase domain-containing protein 2987 75.32 +1 3466256..3466717 - 153 145595553 - Strop_3035 - regulatory protein, MarR 2988 71.49 0 3466814..3468058 + 414 145595554 - Strop_3036 - Bcr/CflA subfamily drug resistance transporter 2989 67.59 0 3468422..3469504 + 360 145595555 - Strop_3037 - chitin-binding domain-containing protein 2990 64.07 -1 3469602..3470063 - 153 145595556 - Strop_3038 - hypothetical protein 2991 64.99 -1 3470076..3470672 - 198 145595557 - Strop_3039 - sigma-70 region 2 domain-containing protein 2992 67.85 0 3470672..3471850 - 392 145595558 - Strop_3040 - peptidase S8 and S53, subtilisin, kexin, sedolisin 2993 72.05 0 3472079..3474751 + 890 145595559 - Strop_3041 - tetratricopeptide TPR_4 2994 68.78 0 3475046..3475660 + 204 145595560 - Strop_3042 - NADPH-dependent FMN reductase 2995 68.67 0 3475691..3475939 + 82 145595561 - Strop_3043 - hypothetical protein 2996 69.06 0 3475927..3477726 + 599 145595562 - Strop_3044 - hypothetical protein 2997 72.37 0 3477729..3480164 + 811 145595563 - Strop_3045 - lantibiotic dehydratase domain-containing protein 2998 70.91 0 3480161..3482446 + 761 145595564 - Strop_3046 - lantibiotic dehydratase domain-containing protein 2999 71.90 0 3482443..3483912 + 489 145595565 - Strop_3047 - hypothetical protein 3000 70.71 0 3483909..3486158 + 749 145595566 - Strop_3048 - lantibiotic dehydratase domain-containing protein 3001 71.75 0 3486155..3487414 + 419 145595567 - Strop_3049 - peptidase U62, modulator of DNA gyrase 3002 72.79 +1 3487407..3488483 + 358 145595568 - Strop_3050 - hypothetical protein 3003 71.66 0 3488458..3489558 + 366 145595569 - Strop_3051 - FAD dependent oxidoreductase 3004 72.02 0 3489558..3490229 + 223 145595570 - Strop_3052 - hypothetical protein 3005 72.62 0 3490262..3491470 - 402 145595571 - Strop_3053 - amidohydrolase 3006 71.79 0 3491572..3494067 + 831 145595572 - Strop_3054 - lantibiotic dehydratase domain-containing protein 3007 68.88 0 3494094..3494951 + 285 145595573 - Strop_3055 - methyltransferase type 11 3008 70.50 0 3495062..3502192 + 2376 145595574 - Strop_3056 - thioester reductase domain-containing protein 3009 66.97 0 3502319..3504280 - 653 145595575 - Strop_3057 - asparagine synthase (glutamine-hydrolyzing) 3010 70.25 0 3504401..3505879 + 492 145595576 - Strop_3058 - Xaa-Pro aminopeptidase 3011 69.02 0 3506161..3507732 + 523 145595577 - Strop_3059 - hypothetical protein 3012 67.11 0 3508078..3510099 + 673 145595578 - Strop_3060 - hypothetical protein 3013 69.90 0 3510166..3513006 - 946 145595579 - Strop_3061 - alpha-1,6-glucosidase, pullulanase-type 3014 68.99 0 3513294..3516128 + 944 145595580 - Strop_3062 - aconitate hydratase 1 3015 70.21 0 3516255..3516536 + 93 145595581 - Strop_3063 - hypothetical protein 3016 69.80 0 3516645..3517571 - 308 145595582 - Strop_3064 - protein of unknown function RIO1 3017 69.92 0 3517727..3518371 - 214 145595583 - Strop_3065 - HAD family hydrolase 3018 70.86 0 3518566..3519138 + 190 145595584 - Strop_3066 - TetR family transcriptional regulator 3019 70.08 0 3519229..3520137 + 302 145595585 - Strop_3067 - hypothetical protein 3020 72.53 0 3520134..3520952 + 272 145595586 - Strop_3068 - hypothetical protein 3021 77.32 +2 3520949..3521455 + 168 145595587 - Strop_3069 - hypothetical protein 3022 75.69 +1 3521497..3522261 + 254 145595588 - Strop_3070 - short-chain dehydrogenase/reductase SDR 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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