version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 202 72.29 0 232734..233195 + 153 145592768 - Strop_0202 - CMP/dCMP deaminase, zinc-binding 203 66.95 0 233303..234010 - 235 145592769 - Strop_0203 - purine nucleoside phosphorylase 204 66.96 0 234505..235521 - 338 145592770 - Strop_0204 - O-methyltransferase family protein 205 64.71 -1 235592..235999 + 135 145592771 - Strop_0205 - hypothetical protein 206 70.42 0 235983..236594 - 203 145592772 - Strop_0206 - hypothetical protein 207 66.33 0 236756..237049 - 97 145592773 - Strop_0207 - hypothetical protein 208 72.18 0 237091..237960 - 289 145592774 - Strop_0208 - hypothetical protein 209 72.37 0 238018..238929 - 303 145592775 - Strop_0209 - aminoglycoside phosphotransferase 210 64.64 -1 239041..240423 - 460 145592776 - Strop_0210 - hypothetical protein 211 66.17 0 240617..241417 - 266 145592777 - Strop_0211 - methyltransferase type 11 212 67.14 0 241433..241852 + 139 145592778 - Strop_0212 - hypothetical protein 213 73.26 +1 242420..244846 + 808 145592779 - Strop_0213 - DNA polymerase III, subunits gamma and tau 214 69.05 0 244878..245255 + 125 145592780 - Strop_0214 - hypothetical protein 215 68.35 0 245263..245856 + 197 145592781 - Strop_0215 - recombination protein RecR 216 66.31 0 246131..247792 + 553 145592782 - Strop_0216 - extracellular solute-binding protein 217 65.97 -1 247867..248871 + 334 145592783 - Strop_0217 - binding-protein-dependent transport systems inner membrane component 218 68.95 0 248868..249830 + 320 145592784 - Strop_0218 - binding-protein-dependent transport systems inner membrane component 219 70.35 0 249898..250956 + 352 145592785 - Strop_0219 - oligopeptide/dipeptide ABC transporter, ATPase subunit 220 70.79 0 250949..252064 + 371 145592786 - Strop_0220 - oligopeptide/dipeptide ABC transporter, ATPase subunit 221 77.06 +2 252120..252581 - 153 145592787 - Strop_0221 - hypothetical protein 222 67.73 0 252578..253327 - 249 145592788 - Strop_0222 - hypothetical protein 223 72.32 0 253327..254829 + 500 145592789 - Strop_0223 - EmrB/QacA family drug resistance transporter 224 67.07 0 254897..256651 - 584 145592790 - Strop_0224 - 2-isopropylmalate synthase 225 72.31 0 256817..257419 - 200 145592791 - Strop_0225 - nitroreductase 226 69.04 0 257654..258919 + 421 145592792 - Strop_0226 - aspartate kinase 227 70.72 0 258923..259984 + 353 145592793 - Strop_0227 - aspartate-semialdehyde dehydrogenase 228 73.11 +1 259989..261416 - 475 145592794 - Strop_0228 - diguanylate cyclase 229 69.07 0 261690..263393 + 567 145592795 - Strop_0229 - 5'-nucleotidase domain-containing protein 230 69.54 0 263470..265695 - 741 145592796 - Strop_0230 - RecD/TraA family helicase 231 65.00 -1 265739..266038 - 99 145592797 - Strop_0231 - hypothetical protein 232 67.56 0 266097..267104 + 335 145592798 - Strop_0232 - ECF subfamily RNA polymerase sigma-24 factor 233 69.44 0 267186..268373 + 395 145592799 - Strop_0233 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 234 64.31 -1 268480..268776 - 98 145592800 - Strop_0234 - antibiotic biosynthesis monooxygenase 235 64.58 -1 268773..269156 - 127 145592801 - Strop_0235 - hypothetical protein 236 69.86 0 269156..269812 - 218 145592802 - Strop_0236 - putative transcriptional regulator 237 73.66 +1 269916..271202 + 428 145592803 - Strop_0237 - amino acid permease-associated region 238 71.54 0 271253..272422 - 389 145592804 - Strop_0238 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 239 70.06 0 272669..273139 + 156 145592805 - Strop_0239 - hypothetical protein 240 74.69 +1 273234..274031 + 265 145592806 - Strop_0240 - enoyl-CoA hydratase/isomerase 241 71.97 0 274055..275581 - 508 145592807 - Strop_0241 - amine oxidase 242 72.30 0 275688..277694 + 668 145592808 - Strop_0242 - TrkA domain-containing protein 243 72.10 0 277670..278461 - 263 145592809 - Strop_0243 - phosphoesterase, PA-phosphatase related 244 68.25 0 278504..279769 + 421 145592810 - Strop_0244 - hypothetical protein 245 71.71 0 279811..280920 - 369 145592811 - Strop_0245 - N-acetylglucosamine-6-phosphate deacetylase 246 75.57 +1 280917..281882 - 321 145592812 - Strop_0246 - ROK family protein 247 73.66 +1 281879..282808 - 309 145592813 - Strop_0247 - sugar isomerase (SIS) 248 69.34 0 282993..283778 + 261 145592814 - Strop_0248 - DeoR family transcriptional regulator 249 69.34 0 283896..284906 + 336 145592815 - Strop_0249 - ABC transporter related 250 68.05 0 284903..285916 + 337 145592816 - Strop_0250 - hypothetical protein 251 74.89 +1 286063..286500 + 145 145592817 - Strop_0251 - hypothetical protein 252 62.96 -1 286531..286746 - 71 145592818 - Strop_0252 - hypothetical protein 253 71.76 0 286964..287473 + 169 145592819 - Strop_0253 - GCN5-related N-acetyltransferase 254 74.83 +1 287525..289777 - 750 145592820 - Strop_0254 - microtubule-severing ATPase 255 70.44 0 289971..290606 + 211 145592821 - Strop_0255 - methyltransferase type 12 256 73.80 +1 290727..293573 + 948 145592822 - Strop_0256 - ABC transporter related 257 70.89 0 293573..294472 + 299 145592823 - Strop_0257 - hypothetical protein 258 73.89 +1 294503..294862 - 119 145592824 - Strop_0258 - hypothetical protein 259 60.34 -2 295198..295434 + 78 145592825 - Strop_0259 - regulatory protein GntR, HTH 260 64.81 -1 295932..296684 - 250 145592826 - Strop_0260 - cell wall anchor domain-containing protein 261 72.28 0 296813..297613 - 266 145592827 - Strop_0261 - TetR family transcriptional regulator 262 67.58 0 297634..298833 + 399 145592828 - Strop_0262 - acyltransferase 3 263 71.41 0 299263..300549 + 428 145592829 - Strop_0263 - threonine synthase 264 70.70 0 300770..301786 + 338 145592830 - Strop_0264 - GCN5-related N-acetyltransferase 265 69.34 0 301827..303512 + 561 145592831 - Strop_0265 - phenylacetic acid degradation protein paaN 266 66.19 0 303658..304497 - 279 145592832 - Strop_0266 - hypothetical protein 267 73.99 +1 304641..305186 - 181 145592833 - Strop_0267 - GCN5-related N-acetyltransferase 268 64.71 -1 305397..305600 + 67 145592834 - Strop_0268 - cold-shock DNA-binding domain-containing protein 269 66.97 0 306170..307792 + 540 145592835 groEL Strop_0269 - chaperonin GroEL 270 73.01 +1 308140..309069 - 309 145592836 - Strop_0270 - GCN5-related N-acetyltransferase 271 74.92 +1 309210..311633 - 807 145592837 - Strop_0271 - peptidase S8 and S53, subtilisin, kexin, sedolisin 272 73.02 +1 311670..313589 + 639 145592838 - Strop_0272 - FAD dependent oxidoreductase 273 73.84 +1 313682..315076 - 464 145592839 - Strop_0273 - FAD linked oxidase domain-containing protein 274 69.58 0 315328..316527 + 399 145592840 - Strop_0274 - membrane protein-like protein 275 75.74 +1 316552..317796 - 414 145592841 - Strop_0275 - aminotransferase, class V 276 70.51 0 317984..319492 + 502 145592842 - Strop_0276 - membrane protein-like protein 277 61.31 -2 319543..319710 - 55 145592843 - Strop_0277 - hypothetical protein 278 69.62 0 319798..320136 - 112 145592844 - Strop_0278 - chaperonin Cpn10 279 69.26 0 320315..321586 + 423 145592845 - Strop_0279 - hypothetical protein 280 73.39 +1 321637..323688 - 683 145592846 - Strop_0280 - helicase c2 281 68.64 0 323826..324332 + 168 145592847 - Strop_0281 - hypothetical protein 282 63.25 -1 324515..325363 + 282 145592848 - Strop_0282 - hypothetical protein 283 67.96 0 325367..326371 + 334 145592849 - Strop_0283 - phosphate transporter 284 73.40 +1 326424..327314 + 296 145592850 - Strop_0284 - NUDIX hydrolase 285 69.30 0 327477..328121 + 214 145592851 - Strop_0285 - phosphate uptake regulator, PhoU 286 65.19 -1 328389..329336 + 315 145592852 - Strop_0286 - phosphate binding protein 287 66.98 0 329338..330285 + 315 145592853 - Strop_0287 - phosphate ABC transporter, inner membrane subunit PstC 288 66.34 0 330282..331202 + 306 145592854 - Strop_0288 - phosphate ABC transporter, inner membrane subunit PstA 289 64.82 -1 331264..332130 + 288 145592855 - Strop_0289 - phosphate ABC transporter, ATPase subunit 290 67.99 0 332148..332903 + 251 145592856 - Strop_0290 - two component transcriptional regulator 291 72.94 +1 333066..333989 - 307 145592857 - Strop_0291 - GCN5-related N-acetyltransferase 292 71.49 0 334015..334968 - 317 145592858 - Strop_0292 - polysaccharide deacetylase 293 66.53 0 335061..335780 - 239 145592859 - Strop_0293 - winged helix family two component response transcriptional regulator 294 74.22 +1 336024..337055 + 343 145592860 - Strop_0294 - hypothetical protein 295 70.71 0 337152..337943 + 263 145592861 - Strop_0295 - hypothetical protein 296 67.66 0 338241..339146 + 301 145592862 - Strop_0296 - rhodanese domain-containing protein 297 69.42 0 339152..339478 + 108 145592863 - Strop_0297 - hypothetical protein 298 70.45 0 339696..340091 - 131 145592864 - Strop_0298 - hypothetical protein 299 60.83 -2 340295..340534 + 79 145592865 - Strop_0299 - regulatory protein GntR, HTH 300 65.00 -1 340915..341394 + 159 145592866 - Strop_0300 - hypothetical protein 301 65.40 -1 341384..342175 + 263 145592867 - Strop_0301 - pentapeptide repeat-containing protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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