version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1975 65.99 -1 2276570..2277607 - 345 145594541 - Strop_2006 - extracellular solute-binding protein 1976 69.23 0 2277613..2278314 - 233 145594542 - Strop_2007 - HAD family hydrolase 1977 72.30 0 2278311..2279429 - 372 145594543 - Strop_2008 - FAD dependent oxidoreductase 1978 68.02 0 2279576..2280316 - 246 145594544 - Strop_2009 - UbiC transcription regulator-associated domain-containing protein 1979 70.33 0 2280462..2281007 + 181 145594545 - Strop_2010 - metal-dependent phosphohydrolase 1980 63.97 -1 2281418..2281825 - 135 145594546 - Strop_2011 - regulatory protein, ArsR 1981 68.56 0 2281857..2283812 + 651 145594547 - Strop_2012 - heavy metal translocating P-type ATPase 1982 66.67 0 2283946..2284083 + 45 145594548 - Strop_2013 - hypothetical protein 1983 69.13 0 2284786..2286447 - 553 145594549 - Strop_2015 - ABC transporter related 1984 68.54 0 2287093..2287626 + 177 145594550 - Strop_2016 - hypothetical protein 1985 73.40 +1 2287626..2289035 + 469 145594551 - Strop_2017 - hypothetical protein 1986 68.01 0 2289032..2290375 + 447 145594552 - Strop_2018 - VWA containing CoxE family protein 1987 65.77 -1 2290390..2291502 + 370 145594553 - Strop_2019 - ATPase 1988 70.28 0 2291499..2292551 + 350 145594554 - Strop_2020 - hypothetical protein 1989 68.53 0 2292521..2293591 - 356 145594555 - Strop_2021 - hypothetical protein 1990 67.15 0 2293641..2294054 + 137 145594556 - Strop_2022 - hypothetical protein 1991 70.65 0 2294086..2295942 + 618 145594557 - Strop_2023 - hypothetical protein 1992 67.35 0 2296009..2296302 - 97 145594558 - Strop_2024 - hypothetical protein 1993 60.73 -2 2296428..2296730 - 100 145594559 - Strop_2025 - hypothetical protein 1994 67.75 0 2296801..2297538 + 245 145594560 - Strop_2026 - helix-turn-helix, type 11 domain-containing protein 1995 67.42 0 2297924..2298319 + 131 145594561 - Strop_2027 - glyoxalase/bleomycin resistance protein/dioxygenase 1996 67.38 0 2298511..2300061 - 516 145594562 - Strop_2028 - hypothetical protein 1997 72.25 0 2300438..2300974 - 178 145594563 - Strop_2029 - regulatory protein, MerR 1998 68.58 0 2301279..2302739 + 486 145594564 - Strop_2030 - hypothetical protein 1999 70.23 0 2302885..2303922 + 345 145594565 - Strop_2031 - hypothetical protein 2000 69.19 0 2304044..2305627 + 527 145594566 - Strop_2032 - cell wall anchor domain-containing protein 2001 64.79 -1 2305624..2307222 + 532 145594567 - Strop_2033 - periplasmic solute binding protein 2002 69.32 0 2307219..2308199 + 326 145594568 - Strop_2034 - hypothetical protein 2003 68.28 0 2308196..2308939 + 247 145594569 - Strop_2035 - ABC transporter related 2004 63.26 -1 2308939..2309877 + 312 145594570 - Strop_2036 - ABC-3 protein 2005 67.28 0 2310135..2310782 + 215 145594571 - Strop_2037 - hypothetical protein 2006 66.03 -1 2310788..2311420 + 210 145594572 - Strop_2038 - hypothetical protein 2007 71.59 0 2311606..2312214 - 202 145594573 - Strop_2039 - class I peptide chain release factor 2008 72.22 0 2312211..2313398 - 395 145594574 - Strop_2040 - hypothetical protein 2009 67.47 0 2313405..2313653 - 82 145594575 - Strop_2041 - hypothetical protein 2010 67.86 0 2314091..2314675 + 194 145594576 - Strop_2042 - hypothetical protein 2011 64.85 -1 2315040..2316305 + 421 145594577 - Strop_2043 - Serine-type D-Ala-D-Ala carboxypeptidase 2012 61.61 -2 2316329..2316901 + 190 145594578 - Strop_2044 - GCN5-related N-acetyltransferase 2013 63.95 -1 2316966..2317922 - 318 145594579 - Strop_2045 - sphingomyelin phosphodiesterase 2014 65.70 -1 2318023..2319675 - 550 145594580 - Strop_2046 - glucose/ribitol dehydrogenase 2015 65.29 -1 2319861..2320295 + 144 145594581 - Strop_2047 - regulatory protein, ArsR 2016 66.67 0 2320292..2320768 + 158 145594582 - Strop_2048 - activator of Hsp90 ATPase 1 family protein 2017 64.01 -1 2320859..2321272 + 137 145594583 - Strop_2049 - glyoxalase/bleomycin resistance protein/dioxygenase 2018 66.30 0 2321319..2321588 + 89 145594584 - Strop_2050 - hypothetical protein 2019 66.67 0 2322355..2322681 + 108 145594585 - Strop_2051 - hypothetical protein 2020 66.19 0 2322850..2324325 + 491 145594586 - Strop_2052 - glycerophosphoryl diester phosphodiesterase 2021 66.83 0 2324345..2324950 + 201 145594587 - Strop_2053 - ferric-uptake regulator 2022 68.64 0 2324947..2327223 + 758 145594588 - Strop_2054 - catalase/peroxidase HPI 2023 68.86 0 2327514..2328974 + 486 145594589 - Strop_2055 - monooxygenase, FAD-binding 2024 64.73 -1 2329248..2330021 - 257 145594590 - Strop_2056 - hypothetical protein 2025 71.00 0 2330264..2331139 - 291 145594591 - Strop_2057 - helix-turn-helix domain-containing protein 2026 68.09 0 2331322..2333214 - 630 145594592 - Strop_2058 - transcriptional activator domain-containing protein 2027 63.43 -1 2333272..2333580 + 102 145594593 - Strop_2059 - hypothetical protein 2028 70.33 0 2333686..2334231 + 181 145594594 - Strop_2060 - hypothetical protein 2029 65.32 -1 2334733..2335104 - 123 145594595 - Strop_2062 - hypothetical protein 2030 66.51 0 2335675..2336307 + 210 145594596 - Strop_2063 - ROK family protein 2031 67.22 0 2336510..2338315 - 601 145594597 - Strop_2064 - carnitine O-acetyltransferase 2032 65.12 -1 2338437..2339279 - 280 145594598 - Strop_2065 - hypothetical protein 2033 71.35 0 2339329..2339712 - 127 145594599 - Strop_2066 - hypothetical protein 2034 68.14 0 2340071..2341561 - 496 145594600 - Strop_2068 - major facilitator transporter 2035 71.66 0 2341653..2342273 + 206 145594601 - Strop_2069 - regulatory protein, TetR 2036 63.77 -1 2342870..2343283 + 137 145594602 - Strop_2070 - cold-shock protein, DNA-binding 2037 68.95 0 2343303..2344529 + 408 145594603 - Strop_2071 - hypothetical protein 2038 65.79 -1 2344552..2345805 - 417 145594604 - Strop_2072 - major facilitator transporter 2039 69.34 0 2345879..2347189 + 436 145594605 - Strop_2073 - von Willebrand factor, type A 2040 72.22 0 2347189..2347962 + 257 145594606 - Strop_2074 - hypothetical protein 2041 72.21 0 2348028..2349272 - 414 145594607 - Strop_2075 - hypothetical protein 2042 73.28 +1 2349332..2350450 + 372 145594608 - Strop_2076 - oxidoreductase FAD-binding subunit 2043 66.23 0 2350466..2351608 + 380 145594609 - Strop_2077 - fatty acid desaturase 2044 72.75 0 2351640..2352773 - 377 145594610 - Strop_2078 - glycosyl transferase, group 1 2045 69.10 0 2352777..2353886 - 369 145594611 - Strop_2079 - glycosyl transferase family protein 2046 71.95 0 2354037..2355380 + 447 145594612 - Strop_2080 - glycosyl transferase, group 1 2047 69.48 0 2355377..2356939 + 520 145594613 - Strop_2081 - glycosyl transferase family protein 2048 71.11 0 2357022..2358710 - 562 145594614 - Strop_2082 - acyl-CoA synthetase 2049 61.02 -2 2358813..2358989 - 58 145594615 - Strop_2083 - hypothetical protein 2050 71.89 0 2359094..2359993 - 299 145594616 - Strop_2084 - hypothetical protein 2051 69.57 0 2359990..2360574 - 194 145594617 - Strop_2085 - rhodanese domain-containing protein 2052 70.77 0 2360650..2362062 - 470 145594618 - Strop_2086 - beta-lactamase domain-containing protein 2053 64.07 -1 2362194..2362463 - 89 145594619 - Strop_2087 - hypothetical protein 2054 69.02 0 2362511..2363446 + 311 145594620 - Strop_2088 - hypothetical protein 2055 72.22 0 2363322..2363969 - 215 145594621 - Strop_2089 - diguanylate cyclase 2056 65.42 -1 2364206..2364445 + 79 145594622 - Strop_2090 - hypothetical protein 2057 69.37 0 2364564..2365451 + 295 145594623 - Strop_2091 - hypothetical protein 2058 66.54 0 2365537..2366337 + 266 145594624 - Strop_2092 - hypothetical protein 2059 69.10 0 2366362..2367798 - 478 145594625 glyA Strop_2093 - serine hydroxymethyltransferase 2060 72.11 0 2368034..2368915 + 293 145594626 - Strop_2094 - metallophosphoesterase 2061 71.75 0 2368946..2370028 + 360 145594627 - Strop_2095 - DNA primase, small subunit 2062 72.34 0 2369975..2370520 - 181 145594628 - Strop_2096 - AsnC/Lrp family regulatory protein 2063 71.54 0 2370626..2371774 + 382 145594629 - Strop_2097 - pyruvate dehydrogenase (acetyl-transferring) 2064 70.55 0 2371774..2372778 + 334 145594630 - Strop_2098 - transketolase, central region 2065 72.50 0 2372778..2374079 + 433 145594631 - Strop_2099 - branched-chain alpha-keto acid dehydrogenase subunit E2 2066 66.82 0 2374325..2375608 + 427 145594632 - Strop_2100 - ErfK/YbiS/YcfS/YnhG family protein 2067 71.16 0 2375691..2376068 - 125 145594633 - Strop_2101 - peptidylprolyl isomerase, FKBP-type 2068 67.85 0 2376207..2376800 - 197 145594634 - Strop_2102 - DoxX family protein 2069 71.99 0 2376888..2377619 - 243 145594635 - Strop_2103 - hypothetical protein 2070 71.43 0 2377703..2378374 + 223 145594636 - Strop_2104 - nitroreductase 2071 64.01 -1 2379412..2379750 - 112 145594637 - Strop_2105 - hypothetical protein 2072 71.26 0 2380040..2381779 - 579 145594638 - Strop_2106 - DEAD/DEAH box helicase domain-containing protein 2073 71.96 0 2382060..2383022 + 320 145594639 - Strop_2107 - hypothetical protein 2074 70.20 0 2383027..2384637 + 536 145594640 - Strop_2108 - asparagine synthase (glutamine-hydrolyzing) 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.