version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 133 71.99 0 142474..144897 + 807 145592699 - Strop_0133 - adenylosuccinate synthase 134 74.26 +1 144964..146214 + 416 145592700 - Strop_0134 - phosphoribosylamine--glycine ligase 135 73.84 +1 146253..147590 - 445 145592701 - Strop_0135 - major facilitator transporter 136 70.62 0 147749..148963 - 404 145592702 - Strop_0136 - acyl-CoA dehydrogenase domain-containing protein 137 64.02 -1 148966..149418 - 150 145592703 - Strop_0137 - sterol-binding domain-containing protein 138 72.30 0 149485..150141 + 218 145592704 - Strop_0138 - TetR family transcriptional regulator 139 72.65 0 150162..150779 - 205 145592705 - Strop_0139 - hypothetical protein 140 74.38 +1 150848..151741 - 297 145592706 - Strop_0140 - dehydratase 141 72.20 0 151741..153096 - 451 145592707 fabG Strop_0141 - 3-ketoacyl-(acyl-carrier-protein) reductase 142 72.24 0 153150..154442 + 430 145592708 - Strop_0142 - acetyl-CoA acetyltransferase 143 69.41 0 154472..154981 - 169 145592709 - Strop_0143 - hypothetical protein 144 68.32 0 155490..156032 + 180 145592710 - Strop_0144 - UbiC transcription regulator-associated domain-containing protein 145 69.33 0 156051..156764 + 237 145592711 - Strop_0145 - GntR family transcriptional regulator 146 70.10 0 156964..158682 + 572 145592712 - Strop_0146 - arginyl-tRNA synthetase 147 70.81 0 158771..160195 + 474 145592713 - Strop_0147 - adenylosuccinate lyase 148 69.84 0 160272..160838 - 188 145592714 - Strop_0148 - hypothetical protein 149 68.57 0 160862..161545 - 227 145592715 - Strop_0149 - peptidase S1 and S6, chymotrypsin/Hap 150 65.14 -1 161742..162200 + 152 145592716 - Strop_0150 - phosphoribosylformylglycinamidine synthase, purS 151 70.93 0 162197..162877 + 226 145592717 - Strop_0151 - phosphoribosylformylglycinamidine synthase I 152 71.23 0 162945..165419 + 824 145592718 - Strop_0152 - phosphoribosylformylglycinamidine synthase II 153 69.38 0 165584..167938 - 784 145592719 - Strop_0153 - hypothetical protein 154 69.07 0 168245..169825 + 526 145592720 - Strop_0154 - amidophosphoribosyltransferase 155 67.88 0 169887..171041 + 384 145592721 - Strop_0155 - phosphoribosylformylglycinamidine cyclo-ligase 156 68.61 0 171178..172311 + 377 145592722 - Strop_0156 - radical SAM domain-containing protein 157 69.62 0 172280..172516 + 78 145592723 - Strop_0157 - hypothetical protein 158 63.43 -1 172731..172946 - 71 145592724 - Strop_0158 - hypothetical protein 159 69.90 0 173238..174320 - 360 145592725 - Strop_0159 - Glu/Leu/Phe/Val dehydrogenase, dimerisation region 160 70.71 0 174389..175378 + 329 145592726 - Strop_0160 - hypothetical protein 161 67.62 0 175631..175840 + 69 145592727 - Strop_0161 - DNA binding domain-containing protein 162 71.22 0 175963..176445 - 160 145592728 - Strop_0162 - hypothetical protein 163 69.93 0 176579..177436 + 285 145592729 - Strop_0163 - 3-hydroxybutyryl-CoA dehydrogenase 164 71.63 0 177412..178176 + 254 145592730 - Strop_0164 - enoyl-CoA hydratase/isomerase 165 68.61 0 178292..179626 - 444 145592731 - Strop_0165 - ABC-type branched-chain amino acid transport systems periplasmic component-like protein 166 69.23 0 179773..180279 - 168 145592732 - Strop_0166 - activator of Hsp90 ATPase 1 family protein 167 66.45 0 180519..180980 + 153 145592733 - Strop_0167 - hypothetical protein 168 69.39 0 180983..182266 + 427 145592734 - Strop_0168 - sterol 3-beta-glucosyltransferase 169 61.73 -2 182587..183477 + 296 145592735 - Strop_0169 - hypothetical protein 170 61.96 -2 183716..184564 - 282 145592736 - Strop_0170 - abortive infection protein 171 68.07 0 185047..185970 + 307 145592737 - Strop_0171 - cation diffusion facilitator family transporter 172 71.32 0 186208..188163 + 651 145592738 - Strop_0172 - copper resistance D domain-containing protein 173 68.03 0 188371..189030 + 219 145592739 - Strop_0173 - DSBA oxidoreductase 174 67.14 0 189027..189659 + 210 145592740 - Strop_0174 - vitamin K epoxide reductase 175 65.47 -1 189826..191241 - 471 145592741 - Strop_0175 - nitrate/nitrite transporter-like protein 176 67.65 0 191238..192656 - 472 145592742 - Strop_0176 - major facilitator transporter 177 69.23 0 192982..196680 + 1232 145592743 - Strop_0177 - nitrate reductase, alpha subunit 178 68.15 0 196680..198299 + 539 145592744 - Strop_0178 - nitrate reductase, beta subunit 179 69.35 0 198296..198967 + 223 145592745 - Strop_0179 - nitrate reductase molybdenum cofactor assembly chaperone 180 68.41 0 198964..199707 + 247 145592746 - Strop_0180 - respiratory nitrate reductase, gamma subunit 181 67.27 0 199855..200187 + 110 145592747 - Strop_0181 - carboxymuconolactone decarboxylase 182 69.83 0 200237..201217 - 326 145592748 - Strop_0182 - helix-turn-helix domain-containing protein 183 65.62 -1 201264..201935 + 223 145592749 - Strop_0183 - methyltransferase type 11 184 65.88 -1 208244..209260 + 338 145592750 - Strop_0184 - alcohol dehydrogenase 185 66.18 0 209436..210458 + 340 145592751 - Strop_0185 - alcohol dehydrogenase 186 65.63 -1 210543..212369 - 608 145592752 - Strop_0186 - VanW family protein 187 72.89 +1 212467..213462 + 331 145592753 - Strop_0187 - NUDIX hydrolase 188 73.58 +1 213448..214719 - 423 145592754 - Strop_0188 - hypothetical protein 189 71.29 0 214716..219023 - 1435 145592755 - Strop_0189 - hypothetical protein 190 68.68 0 219236..221071 + 611 145592756 - Strop_0190 - hypothetical protein 191 71.86 0 221072..222823 + 583 145592757 - Strop_0191 - hypothetical protein 192 66.15 0 222816..223010 + 64 145592758 - Strop_0192 - hypothetical protein 193 69.01 0 222995..224191 - 398 145592759 - Strop_0193 - glycosyl transferase, group 1 194 68.23 0 224272..225483 - 403 145592760 - Strop_0194 - acyltransferase 3 195 63.91 -1 225598..226650 + 350 145592761 - Strop_0195 - hypothetical protein 196 70.14 0 226809..228479 - 556 145592762 - Strop_0196 - hypothetical protein 197 70.40 0 228612..229682 + 356 145592763 - Strop_0197 - hypothetical protein 198 71.15 0 229562..230632 - 356 145592764 - Strop_0198 - hypothetical protein 199 72.60 0 230664..231404 - 246 145592765 - Strop_0199 - peptidase M23B 200 74.38 +1 231462..231824 + 120 145592766 - Strop_0200 - hypothetical protein 201 70.67 0 232139..232663 + 174 145592767 - Strop_0201 - hypothetical protein 202 72.29 0 232734..233195 + 153 145592768 - Strop_0202 - CMP/dCMP deaminase, zinc-binding 203 66.95 0 233303..234010 - 235 145592769 - Strop_0203 - purine nucleoside phosphorylase 204 66.96 0 234505..235521 - 338 145592770 - Strop_0204 - O-methyltransferase family protein 205 64.71 -1 235592..235999 + 135 145592771 - Strop_0205 - hypothetical protein 206 70.42 0 235983..236594 - 203 145592772 - Strop_0206 - hypothetical protein 207 66.33 0 236756..237049 - 97 145592773 - Strop_0207 - hypothetical protein 208 72.18 0 237091..237960 - 289 145592774 - Strop_0208 - hypothetical protein 209 72.37 0 238018..238929 - 303 145592775 - Strop_0209 - aminoglycoside phosphotransferase 210 64.64 -1 239041..240423 - 460 145592776 - Strop_0210 - hypothetical protein 211 66.17 0 240617..241417 - 266 145592777 - Strop_0211 - methyltransferase type 11 212 67.14 0 241433..241852 + 139 145592778 - Strop_0212 - hypothetical protein 213 73.26 +1 242420..244846 + 808 145592779 - Strop_0213 - DNA polymerase III, subunits gamma and tau 214 69.05 0 244878..245255 + 125 145592780 - Strop_0214 - hypothetical protein 215 68.35 0 245263..245856 + 197 145592781 - Strop_0215 - recombination protein RecR 216 66.31 0 246131..247792 + 553 145592782 - Strop_0216 - extracellular solute-binding protein 217 65.97 -1 247867..248871 + 334 145592783 - Strop_0217 - binding-protein-dependent transport systems inner membrane component 218 68.95 0 248868..249830 + 320 145592784 - Strop_0218 - binding-protein-dependent transport systems inner membrane component 219 70.35 0 249898..250956 + 352 145592785 - Strop_0219 - oligopeptide/dipeptide ABC transporter, ATPase subunit 220 70.79 0 250949..252064 + 371 145592786 - Strop_0220 - oligopeptide/dipeptide ABC transporter, ATPase subunit 221 77.06 +2 252120..252581 - 153 145592787 - Strop_0221 - hypothetical protein 222 67.73 0 252578..253327 - 249 145592788 - Strop_0222 - hypothetical protein 223 72.32 0 253327..254829 + 500 145592789 - Strop_0223 - EmrB/QacA family drug resistance transporter 224 67.07 0 254897..256651 - 584 145592790 - Strop_0224 - 2-isopropylmalate synthase 225 72.31 0 256817..257419 - 200 145592791 - Strop_0225 - nitroreductase 226 69.04 0 257654..258919 + 421 145592792 - Strop_0226 - aspartate kinase 227 70.72 0 258923..259984 + 353 145592793 - Strop_0227 - aspartate-semialdehyde dehydrogenase 228 73.11 +1 259989..261416 - 475 145592794 - Strop_0228 - diguanylate cyclase 229 69.07 0 261690..263393 + 567 145592795 - Strop_0229 - 5'-nucleotidase domain-containing protein 230 69.54 0 263470..265695 - 741 145592796 - Strop_0230 - RecD/TraA family helicase 231 65.00 -1 265739..266038 - 99 145592797 - Strop_0231 - hypothetical protein 232 67.56 0 266097..267104 + 335 145592798 - Strop_0232 - ECF subfamily RNA polymerase sigma-24 factor 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0