version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1701 70.06 0 1974658..1975305 - 215 145594267 - Strop_1722 - hypothetical protein 1702 68.30 0 1975541..1976518 + 325 145594268 - Strop_1723 - hypothetical protein 1703 66.28 0 1976588..1978132 - 514 145594269 - Strop_1724 - 8-amino-7-oxononanoate synthase 1704 68.47 0 1978159..1979487 - 442 145594270 - Strop_1725 - monooxygenase, FAD-binding 1705 68.37 0 1979601..1980128 + 175 145594271 - Strop_1726 - GCN5-related N-acetyltransferase 1706 69.88 0 1980587..1981084 + 165 145594272 - Strop_1727 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1707 72.99 +1 1981098..1981982 - 294 145594273 - Strop_1728 - regulatory protein, LysR 1708 72.12 0 1982055..1983320 + 421 145594274 - Strop_1729 - major facilitator transporter 1709 68.33 0 1983441..1983920 + 159 145594275 - Strop_1730 - hypothetical protein 1710 70.32 0 1984070..1984753 + 227 145594276 - Strop_1731 - hypothetical protein 1711 70.32 0 1984846..1988541 - 1231 145594277 - Strop_1732 - DEAD/DEAH box helicase domain-containing protein 1712 75.81 +1 1988944..1989588 + 214 145594278 - Strop_1734 - peptidase C60, sortase A and B 1713 60.92 -2 1989609..1990478 - 289 145594279 - Strop_1735 - sulfotransferase 1714 69.80 0 1990687..1991484 - 265 145594280 - Strop_1736 - exodeoxyribonuclease III Xth 1715 71.23 0 1991620..1992540 - 306 145594281 - Strop_1737 - hypothetical protein 1716 73.71 +1 1993062..1993856 + 264 145594282 - Strop_1738 - hypothetical protein 1717 70.18 0 1993825..1994679 - 284 145594283 - Strop_1739 - GDSL family lipase 1718 69.17 0 1994853..1995452 - 199 145594284 - Strop_1740 - hypothetical protein 1719 70.08 0 1995621..1995884 + 87 145594285 - Strop_1741 - hypothetical protein 1720 69.07 0 1995897..1997309 + 470 145594286 gabD1 Strop_1742 - succinic semialdehyde dehydrogenase 1721 67.49 0 1997514..1998239 + 241 145594287 - Strop_1743 - protein phosphatase 2C domain-containing protein 1722 75.93 +1 1998243..2000810 - 855 145594288 - Strop_1744 - ATP-dependent helicase HrpB 1723 67.69 0 2000837..2001031 - 64 145594289 - Strop_1745 - hypothetical protein 1724 67.97 0 2001070..2001912 - 280 145594290 - Strop_1746 - helix-turn-helix domain-containing protein 1725 69.08 0 2002738..2004270 + 510 145594291 - Strop_1747 - amino acid permease-associated region 1726 70.39 0 2004267..2004857 + 196 145594292 - Strop_1748 - GCN5-related N-acetyltransferase 1727 68.20 0 2005386..2005973 - 195 145594293 - Strop_1749 - hypothetical protein 1728 75.16 +1 2006113..2007054 + 313 145594294 - Strop_1750 - hypothetical protein 1729 69.33 0 2007316..2008179 + 287 145594295 - Strop_1751 - TM helix repeat-containing protein 1730 76.46 +2 2008233..2008610 - 125 145594296 - Strop_1752 - hypothetical protein 1731 74.42 +1 2008846..2009103 - 85 145594297 - Strop_1753 - hypothetical protein 1732 67.53 0 2009193..2009654 - 153 145594298 - Strop_1754 - cyclase/dehydrase 1733 70.98 0 2009695..2010111 - 138 145594299 - Strop_1755 - hypothetical protein 1734 70.62 0 2010223..2010627 + 134 145594300 - Strop_1756 - hypothetical protein 1735 72.87 +1 2010688..2012154 - 488 145594301 - Strop_1757 - aldehyde dehydrogenase 1736 74.27 +1 2012194..2013798 + 534 145594302 - Strop_1758 - FAD dependent oxidoreductase 1737 68.10 0 2013863..2014630 - 255 145594303 - Strop_1759 - dolichyl-phosphate beta-D-mannosyltransferase 1738 73.18 +1 2015030..2016811 + 593 145594304 - Strop_1760 - HAD superfamily hydrolase 1739 70.76 0 2016808..2017785 + 325 145594305 - Strop_1761 - hypothetical protein 1740 73.38 +1 2017770..2018990 + 406 145594306 - Strop_1762 - glycosyl transferase, group 1 1741 73.41 +1 2018987..2019727 + 246 145594307 - Strop_1763 - phosphoheptose isomerase 1742 74.70 +1 2019730..2021235 + 501 145594308 - Strop_1764 - cytidyltransferase-like protein 1743 70.16 0 2021232..2021918 + 228 145594309 - Strop_1765 - short-chain dehydrogenase/reductase SDR 1744 72.94 +1 2021915..2022871 + 318 145594310 - Strop_1766 - glycosyl transferase family protein 1745 70.43 0 2022855..2023838 + 327 145594311 - Strop_1767 - hypothetical protein 1746 73.61 +1 2024202..2025698 + 498 145594312 - Strop_1768 - glycoside hydrolase family 3 protein 1747 72.52 0 2025754..2026965 - 403 145594313 - Strop_1769 - cysteine desulfurase family protein 1748 71.54 0 2027038..2027406 + 122 145594314 - Strop_1770 - hypothetical protein 1749 70.49 0 2027666..2028868 + 400 145594315 - Strop_1771 - MscS mechanosensitive ion channel 1750 72.59 0 2029138..2029593 + 151 145594316 - Strop_1772 - hypothetical protein 1751 71.75 0 2029590..2029904 + 104 145594317 - Strop_1773 - hypothetical protein 1752 71.85 0 2029901..2030170 + 89 145594318 - Strop_1774 - hypothetical protein 1753 65.20 -1 2030468..2030671 + 67 145594319 - Strop_1775 - cold-shock protein, DNA-binding 1754 71.79 0 2030788..2030982 - 64 145594320 - Strop_1776 - hypothetical protein 1755 70.83 0 2031021..2032004 - 327 145594321 - Strop_1777 - aldo/keto reductase 1756 71.93 0 2032087..2032884 + 265 145594322 - Strop_1778 - trans-aconitate 2-methyltransferase 1757 70.77 0 2032881..2033903 + 340 145594323 - Strop_1779 - adenosine deaminase 1758 72.30 0 2034098..2035180 - 360 145594324 - Strop_1780 - cell wall anchor domain-containing protein 1759 70.34 0 2035201..2035881 - 226 145594325 - Strop_1781 - response regulator receiver 1760 75.79 +1 2035964..2036884 + 306 145594326 - Strop_1782 - ADP-ribosylation/crystallin J1 1761 67.36 0 2036972..2038987 + 671 145594327 thrS Strop_1783 - threonyl-tRNA synthetase 1762 69.40 0 2039044..2039592 + 182 145594328 - Strop_1784 - histidine triad (HIT) protein 1763 72.24 0 2039663..2041816 - 717 145594329 - Strop_1785 - elongation factor G 1764 71.07 0 2042066..2042701 + 211 145594330 - Strop_1786 - CDP-alcohol phosphatidyltransferase 1765 72.56 0 2042724..2043656 + 310 145594331 - Strop_1787 - lipid A biosynthesis lauroyl acyltransferase 1766 71.32 0 2043672..2044832 + 386 145594332 - Strop_1788 - phosphatidylinositol alpha-mannosyltransferase 1767 73.41 +1 2044887..2045390 + 167 145594333 - Strop_1789 - hypothetical protein 1768 67.64 0 2045516..2046436 + 306 145594334 - Strop_1790 - pyridoxine biosynthesis protein 1769 69.14 0 2046510..2047115 + 201 145594335 - Strop_1791 - SNO glutamine amidotransferase 1770 65.47 -1 2047354..2048103 + 249 145594336 - Strop_1792 - hypothetical protein 1771 69.52 0 2048545..2050332 + 595 145594337 - Strop_1793 - prolyl-tRNA synthetase 1772 69.68 0 2050434..2051495 - 353 145594338 - Strop_1794 - hypothetical protein 1773 70.51 0 2051492..2052376 - 294 145594339 - Strop_1795 - ABC transporter related 1774 70.42 0 2052466..2053158 - 230 145594340 - Strop_1796 - response regulator receiver 1775 71.83 0 2053155..2054375 - 406 145594341 - Strop_1797 - histidine kinase, dimerisation and phosphoacceptor region 1776 66.81 0 2054610..2058143 + 1177 145594342 dnaE Strop_1798 - DNA polymerase III subunit alpha 1777 73.37 +1 2058215..2059258 + 347 145594343 - Strop_1799 - aminotransferase, class V 1778 66.00 -1 2059433..2060488 + 351 145594344 - Strop_1800 - alpha/beta hydrolase fold 1779 70.87 0 2060918..2061679 + 253 145594345 - Strop_1801 - ABC transporter related 1780 71.43 0 2061666..2062358 + 230 145594346 - Strop_1802 - ABC transporter related 1781 65.95 -1 2062405..2063658 + 417 145594347 - Strop_1803 - hypothetical protein 1782 69.05 0 2063655..2064536 + 293 145594348 - Strop_1804 - inner-membrane translocator 1783 71.01 0 2064533..2065546 + 337 145594349 - Strop_1805 - inner-membrane translocator 1784 74.43 +1 2065592..2067511 - 639 145594350 - Strop_1806 - GAF domain-containing protein 1785 70.23 0 2067527..2068312 - 261 145594351 - Strop_1807 - 3-hydroxybutyrate dehydrogenase 1786 72.67 0 2068571..2069053 + 160 145594352 - Strop_1808 - crossover junction endodeoxyribonuclease 1787 75.46 +1 2069050..2069652 + 200 145594353 - Strop_1809 - Holliday junction DNA helicase RuvA 1788 70.61 0 2069709..2070773 + 354 145594354 ruvB Strop_1810 - Holliday junction DNA helicase B 1789 64.58 -1 2070912..2071247 + 111 145594355 - Strop_1811 - preprotein translocase, YajC subunit 1790 70.21 0 2071463..2073463 + 666 145594356 - Strop_1812 - protein-export membrane protein SecD 1791 69.79 0 2073465..2074649 + 394 145594357 - Strop_1813 - protein-export membrane protein SecF 1792 69.31 0 2074737..2075303 + 188 145594358 - Strop_1814 - adenine phosphoribosyltransferase 1793 67.03 0 2075530..2077977 + 815 145594359 - Strop_1815 - RelA/SpoT family protein 1794 69.31 0 2078138..2078968 - 276 145594360 - Strop_1816 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 1795 71.41 0 2080124..2080840 + 238 145594361 - Strop_1818 - beta-lactamase domain-containing protein 1796 71.33 0 2080894..2082222 + 442 145594362 hisS Strop_1819 - histidyl-tRNA synthetase 1797 69.55 0 2082370..2083305 + 311 145594363 - Strop_1820 - fatty acid desaturase, type 2 1798 71.66 0 2083579..2085402 + 607 145594364 aspS Strop_1821 - aspartyl-tRNA synthetase 1799 71.86 0 2085571..2086167 + 198 145594365 - Strop_1822 - regulatory protein, ArsR 1800 74.19 +1 2086167..2087561 + 464 145594366 - Strop_1823 - major facilitator transporter 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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