version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1598 62.93 -1 1838499..1839086 + 195 145594164 - Strop_1618 - hypothetical protein 1599 63.96 -1 1839290..1840654 + 454 145594165 - Strop_1619 - hypothetical protein 1600 65.22 -1 1841135..1842382 + 415 145594166 - Strop_1620 - polymorphic membrane protein, Chlamydia 1601 68.77 0 1842470..1842754 - 94 145594167 - Strop_1621 - hypothetical protein 1602 69.19 0 1842872..1844335 - 487 145594168 - Strop_1622 - 2-nitropropane dioxygenase, NPD 1603 65.53 -1 1844376..1846049 + 557 145594169 - Strop_1623 - hypothetical protein 1604 63.71 -1 1846168..1846980 - 270 145594170 - Strop_1624 - peptidoglycan binding domain-containing protein 1605 67.86 0 1847489..1848991 + 500 145594171 - Strop_1625 - major facilitator transporter 1606 67.48 0 1849127..1850596 + 489 145594172 - Strop_1626 - hypothetical protein 1607 72.04 0 1850571..1851836 - 421 145594173 - Strop_1627 - putative esterase 1608 70.26 0 1851833..1852639 - 268 145594174 - Strop_1628 - ABC transporter related 1609 70.47 0 1852654..1853706 - 350 145594175 - Strop_1629 - transport system permease protein 1610 72.92 +1 1853703..1854773 - 356 145594176 - Strop_1630 - transport system permease protein 1611 67.67 0 1854763..1855755 - 330 145594177 - Strop_1631 - iron-enterobactin transporter periplasmic binding protein 1612 66.88 0 1856189..1858969 + 926 145594178 - Strop_1632 - asparagine synthase (glutamine-hydrolyzing) 1613 64.53 -1 1859045..1860028 - 327 145594179 - Strop_1633 - substrate-binding region of ABC-type glycine betaine transport system 1614 66.92 0 1860088..1860873 - 261 145594180 - Strop_1634 - binding-protein-dependent transport systems inner membrane component 1615 67.00 0 1860870..1862063 - 397 145594181 - Strop_1635 - glycine betaine/L-proline ABC transporter, ATPase subunit 1616 67.22 0 1862060..1862788 - 242 145594182 - Strop_1636 - binding-protein-dependent transport systems inner membrane component 1617 65.02 -1 1863297..1864448 + 383 145594183 - Strop_1637 - UDP-galactopyranose mutase 1618 69.76 0 1864452..1865420 + 322 145594184 - Strop_1638 - glycosyl transferase family protein 1619 67.98 0 1865749..1867425 + 558 145594185 - Strop_1639 - choline dehydrogenase 1620 70.73 0 1867490..1868965 + 491 145594186 - Strop_1640 - aldehyde dehydrogenase 1621 69.44 0 1869132..1870211 + 359 145594187 - Strop_1641 - glycine betaine/L-proline ABC transporter, ATPase subunit 1622 67.92 0 1870211..1872205 + 664 145594188 - Strop_1642 - binding-protein-dependent transport systems inner membrane component 1623 63.89 -1 1872285..1873256 + 323 145594189 - Strop_1643 - substrate-binding region of ABC-type glycine betaine transport system 1624 69.16 0 1873278..1874279 + 333 145594190 - Strop_1644 - hypothetical protein 1625 73.76 +1 1874329..1874793 - 154 145594191 - Strop_1645 - regulatory protein, MerR 1626 66.73 0 1874793..1876376 - 527 145594192 - Strop_1646 - sulphate transporter 1627 71.80 0 1876820..1877890 + 356 145594193 - Strop_1647 - chitin-binding domain-containing protein 1628 70.83 0 1877991..1878566 + 191 145594194 - Strop_1648 - hypothetical protein 1629 61.60 -2 1878638..1879723 - 361 145594195 - Strop_1649 - hypothetical protein 1630 71.15 0 1879883..1882267 - 794 145594196 - Strop_1650 - regulatory protein, LuxR 1631 69.46 0 1882273..1884168 - 631 145594197 - Strop_1651 - heat shock protein 70 1632 66.97 0 1884356..1885018 + 220 145594198 - Strop_1652 - hypothetical protein 1633 68.39 0 1885024..1886529 - 501 145594199 - Strop_1653 - GTP-binding protein, HSR1-related 1634 67.11 0 1886526..1888337 - 603 145594200 - Strop_1654 - dynamin family protein 1635 72.92 +1 1888441..1889064 - 207 145594201 - Strop_1655 - Rieske (2Fe-2S) domain-containing protein 1636 68.67 0 1889061..1889660 - 199 145594202 - Strop_1656 - hypothetical protein 1637 69.92 0 1889657..1890301 - 214 145594203 - Strop_1657 - hypothetical protein 1638 67.13 0 1890396..1892129 + 577 145594204 - Strop_1658 - adenylyl cyclase class-3/4/guanylyl cyclase 1639 68.15 0 1892126..1892797 + 223 145594205 - Strop_1659 - cyclic nucleotide-binding 1640 58.61 -2 1893098..1893457 + 119 145594206 - Strop_1660 - hypothetical protein 1641 64.60 -1 1894561..1895238 - 225 145594207 - Strop_1661 - helix-turn-helix domain-containing protein 1642 67.90 0 1896869..1897762 - 297 145594208 - Strop_1662 - transposase IS116/IS110/IS902 family protein 1643 68.33 0 1898671..1899150 - 159 145594209 - Strop_1664 - hypothetical protein 1644 70.75 0 1899361..1900953 + 530 145594210 - Strop_1665 - diguanylate cyclase 1645 68.20 0 1901057..1903015 + 652 145594211 - Strop_1666 - Na+/H+ antiporter NhaA 1646 69.93 0 1903128..1903433 + 101 145594212 - Strop_1667 - hypothetical protein 1647 71.17 0 1903506..1905080 + 524 145594213 - Strop_1668 - glucose-6-phosphate 1-dehydrogenase 1648 66.08 -1 1905186..1906718 + 510 145594214 - Strop_1669 - extracellular solute-binding protein 1649 68.36 0 1906769..1907713 + 314 145594215 - Strop_1670 - binding-protein-dependent transport systems inner membrane component 1650 69.95 0 1907710..1908591 + 293 145594216 - Strop_1671 - binding-protein-dependent transport systems inner membrane component 1651 72.53 0 1908588..1909577 + 329 145594217 - Strop_1672 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1652 72.90 +1 1909574..1910584 + 336 145594218 - Strop_1673 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1653 71.75 0 1910629..1911336 - 235 145594219 - Strop_1674 - cation efflux protein 1654 70.90 0 1911333..1911686 - 117 145594220 - Strop_1675 - regulatory protein, ArsR 1655 74.88 +1 1911797..1912222 + 141 145594221 - Strop_1676 - hypothetical protein 1656 69.75 0 1912219..1914294 + 691 145594222 - Strop_1677 - Amylo-alpha-1,6-glucosidase 1657 72.87 +1 1914335..1915189 - 284 145594223 - Strop_1678 - hypothetical protein 1658 69.70 0 1915351..1916601 - 416 145594224 - Strop_1679 - hypothetical protein 1659 68.04 0 1916977..1919085 + 702 145594225 - Strop_1680 - DNA topoisomerase type IIA subunit B region 2 domain-containing protein 1660 70.65 0 1919157..1921640 + 827 145594226 - Strop_1681 - DNA topoisomerase IV subunit A 1661 70.89 0 1922496..1923371 + 291 145594227 - Strop_1682 - hypothetical protein 1662 72.57 0 1923441..1925135 - 564 145594228 - Strop_1683 - hypothetical protein 1663 70.27 0 1925125..1926678 - 517 145594229 - Strop_1684 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1664 66.19 0 1926711..1927550 - 279 145594230 - Strop_1685 - ABC transporter related 1665 63.99 -1 1927543..1928439 - 298 145594231 - Strop_1686 - ABC-2 type transporter 1666 67.54 0 1928460..1929260 + 266 145594232 - Strop_1687 - regulatory protein, TetR 1667 68.02 0 1929348..1930457 + 369 145594233 - Strop_1688 - glutamine--scyllo-inositol transaminase 1668 67.15 0 1930454..1931488 + 344 145594234 - Strop_1689 - oxidoreductase domain-containing protein 1669 64.80 -1 1932019..1933572 + 517 145594235 - Strop_1690 - glycosyl transferase, group 1 1670 69.81 0 1933689..1935341 + 550 145594236 - Strop_1691 - glycosyl transferase, group 1 1671 68.27 0 1935338..1936894 + 518 145594237 - Strop_1692 - glycosyl transferase family protein 1672 70.09 0 1936900..1938183 + 427 145594238 - Strop_1693 - UDP-glucose/GDP-mannose dehydrogenase 1673 68.67 0 1938251..1938799 - 182 145594239 - Strop_1694 - hypothetical protein 1674 72.45 0 1938993..1939649 + 218 145594240 - Strop_1695 - response regulator receiver 1675 73.48 +1 1939671..1941080 + 469 145594241 - Strop_1696 - ATPase domain-containing protein 1676 71.10 0 1941088..1942080 - 330 145594242 - Strop_1697 - TRAP transporter solute receptor TAXI family protein 1677 73.30 +1 1942137..1942799 - 220 145594243 - Strop_1698 - hypothetical protein 1678 71.37 0 1942923..1944581 - 552 145594244 - Strop_1699 - hypothetical protein 1679 72.70 0 1944661..1945704 + 347 145594245 - Strop_1700 - hypothetical protein 1680 70.67 0 1945775..1947424 + 549 145594246 - Strop_1701 - phosphoglucomutase 1681 71.72 0 1947531..1948460 - 309 145594247 - Strop_1702 - NAD(+) kinase 1682 68.44 0 1948599..1951703 - 1034 145594248 - Strop_1703 - peptidase M14, carboxypeptidase A 1683 77.18 +2 1951855..1952301 - 148 145594249 - Strop_1704 - hypothetical protein 1684 66.15 0 1952405..1952989 + 194 145594250 - Strop_1705 - deaminase-reductase domain-containing protein 1685 71.64 0 1953291..1955702 - 803 145594251 - Strop_1706 - RNA-binding S1 domain-containing protein 1686 71.75 0 1955813..1956973 - 386 145594252 - Strop_1707 - Zn-dependent hydrolase of the beta-lactamase fold-like protein 1687 69.18 0 1957104..1957859 - 251 145594253 - Strop_1708 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit 1688 68.48 0 1957856..1959787 - 643 145594254 sdhA Strop_1709 - succinate dehydrogenase flavoprotein subunit 1689 66.96 0 1959790..1960473 - 227 145594255 - Strop_1710 - succinate dehydrogenase/fumarate reductase cytochrome b subunit 1690 68.59 0 1960554..1961489 + 311 145594256 - Strop_1711 - LysR family transcriptional regulator 1691 70.62 0 1961502..1965521 - 1339 145594257 - Strop_1712 - ATP-dependent helicase HrpA 1692 69.54 0 1965714..1966409 + 231 145594258 - Strop_1713 - ThiJ/PfpI domain-containing protein 1693 69.63 0 1966411..1966983 + 190 145594259 - Strop_1714 - regulatory protein, TetR 1694 65.91 -1 1967540..1967803 - 87 145594260 - Strop_1715 - hypothetical protein 1695 61.73 -2 1967837..1968991 - 384 145594261 - Strop_1716 - scyllo-inosamine-4-phosphate amidinotransferase 1696 66.97 0 1969507..1970841 + 444 145594262 - Strop_1717 - hypothetical protein 1697 71.88 0 1970930..1971964 + 344 145594263 - Strop_1718 - alcohol dehydrogenase 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0