version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1473 68.34 0 1702965..1704692 - 575 145594039 - Strop_1492 - major facilitator transporter 1474 67.01 0 1704900..1705484 - 194 145594040 - Strop_1493 - NADPH-dependent FMN reductase 1475 66.27 0 1705648..1706145 + 165 145594041 - Strop_1494 - redox-sensitive transcriptional activator SoxR 1476 70.56 0 1706332..1708230 - 632 145594042 - Strop_1495 - hypothetical protein 1477 70.85 0 1708325..1708993 + 222 145594043 - Strop_1496 - response regulator receiver 1478 72.99 +1 1708990..1710159 + 389 145594044 - Strop_1497 - ATPase domain-containing protein 1479 68.62 0 1710447..1711880 + 477 145594045 - Strop_1498 - monooxygenase, FAD-binding 1480 68.48 0 1712082..1712357 + 91 145594046 - Strop_1499 - hypothetical protein 1481 68.64 0 1712871..1713377 - 168 145594047 - Strop_1500 - hypothetical protein 1482 67.41 0 1713371..1714042 - 223 145594048 - Strop_1501 - hydrolase 1483 67.20 0 1714192..1714566 + 124 145594049 - Strop_1502 - hypothetical protein 1484 66.33 0 1714748..1715641 + 297 145594050 - Strop_1503 - luciferase family protein 1485 70.24 0 1715701..1717017 - 438 145594051 - Strop_1504 - UDP-glucose 6-dehydrogenase 1486 65.16 -1 1716944..1717870 - 308 145594052 - Strop_1505 - methyltransferase type 11 1487 70.27 0 1718567..1718899 + 110 145594053 - Strop_1506 - hypothetical protein 1488 68.09 0 1718896..1719177 - 93 145594054 - Strop_1507 - hypothetical protein 1489 71.51 0 1719314..1719871 - 185 145594055 - Strop_1508 - hypothetical protein 1490 66.31 0 1720135..1720701 + 188 145594056 - Strop_1509 - hypothetical protein 1491 69.84 0 1721007..1723115 - 702 145594057 - Strop_1510 - hypothetical protein 1492 66.46 0 1723108..1723599 - 163 145594058 - Strop_1511 - hypothetical protein 1493 67.46 0 1723889..1724266 + 125 145594059 - Strop_1512 - hypothetical protein 1494 65.72 -1 1724537..1724959 - 140 145594060 - Strop_1513 - hypothetical protein 1495 66.81 0 1724916..1725617 - 233 145594061 - Strop_1514 - hypothetical protein 1496 67.61 0 1725871..1726083 - 70 145594062 - Strop_1515 - hypothetical protein 1497 64.78 -1 1726170..1726487 - 105 145594063 - Strop_1516 - hypothetical protein 1498 66.18 0 1726540..1726746 - 68 145594064 - Strop_1517 - hypothetical protein 1499 66.91 0 1726760..1727596 - 278 145594065 - Strop_1518 - helix-turn-helix domain-containing protein 1500 75.00 +1 1727872..1728195 + 107 145594066 - Strop_1519 - hypothetical protein 1501 77.01 +2 1728192..1728452 + 86 145594067 - Strop_1520 - hypothetical protein 1502 76.07 +1 1728532..1730562 + 676 145594068 - Strop_1521 - hypothetical protein 1503 68.06 0 1730635..1731924 - 429 145594069 - Strop_1522 - amidohydrolase 1504 73.10 +1 1732059..1732493 - 144 145594070 - Strop_1523 - GCN5-related N-acetyltransferase 1505 68.82 0 1732704..1734332 + 542 145594071 - Strop_1524 - ABC transporter related 1506 72.37 0 1734340..1735374 - 344 145594072 - Strop_1525 - hypothetical protein 1507 69.96 0 1735517..1737583 - 688 145594073 - Strop_1526 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 1508 70.59 0 1737639..1738835 - 398 145594074 - Strop_1527 - acetyl-CoA acetyltransferase 1509 74.26 +1 1738939..1740294 - 451 145594075 - Strop_1528 - 3'-5' exonuclease 1510 72.56 0 1740514..1741650 + 378 145594076 - Strop_1529 - peptidase S1 and S6, chymotrypsin/Hap 1511 71.78 0 1741736..1742557 + 273 145594077 - Strop_1530 - hypothetical protein 1512 71.67 0 1742601..1743200 - 199 145594078 - Strop_1531 - hypothetical protein 1513 70.25 0 1743345..1744460 + 371 145594079 - Strop_1532 - uroporphyrinogen decarboxylase 1514 74.40 +1 1744466..1745875 + 469 145594080 - Strop_1533 - protoporphyrinogen oxidase 1515 68.38 0 1745872..1746573 + 233 145594081 - Strop_1534 - chlorite dismutase 1516 69.65 0 1746684..1747052 - 122 145594082 - Strop_1535 - hypothetical protein 1517 67.91 0 1747148..1748032 + 294 145594083 - Strop_1536 - LysR, substrate-binding 1518 72.19 0 1748153..1748605 - 150 145594084 - Strop_1537 - GCN5-related N-acetyltransferase 1519 75.55 +1 1748589..1749500 - 303 145594085 - Strop_1538 - cytochrome c biogenesis protein, transmembrane region 1520 72.16 0 1749502..1750083 - 193 145594086 - Strop_1539 - redoxin domain-containing protein 1521 67.05 0 1750227..1750487 - 86 145594087 - Strop_1540 - hypothetical protein 1522 65.42 -1 1750774..1751334 - 186 145594088 - Strop_1541 - hypothetical protein 1523 67.56 0 1751794..1752240 - 148 145594089 - Strop_1542 - methionine-R-sulfoxide reductase 1524 71.05 0 1752252..1753277 + 341 145594090 - Strop_1543 - DNA primase, small subunit 1525 69.31 0 1753282..1753773 - 163 145594091 - Strop_1544 - GCN5-related N-acetyltransferase 1526 72.01 0 1753782..1755410 - 542 145594092 - Strop_1545 - TAP domain-containing protein 1527 70.27 0 1755385..1756494 - 369 145594093 ligC Strop_1546 - ATP-dependent DNA ligase 1528 74.14 +1 1756609..1757103 - 164 145594094 - Strop_1547 - GCN5-related N-acetyltransferase 1529 76.87 +2 1757235..1758155 - 306 145594095 - Strop_1548 - hypothetical protein 1530 75.41 +1 1758328..1759185 - 285 145594096 - Strop_1549 - hypothetical protein 1531 75.28 +1 1759185..1760171 - 328 145594097 - Strop_1550 - hypothetical protein 1532 75.64 +1 1760200..1762674 - 824 145594098 - Strop_1551 - SMC domain-containing protein 1533 73.19 +1 1762674..1763822 - 382 145594099 - Strop_1552 - nuclease SbcCD, D subunit 1534 70.84 0 1763836..1765584 - 582 145594100 - Strop_1553 - hypothetical protein 1535 69.35 0 1765770..1767449 + 559 145594101 - Strop_1554 - hypothetical protein 1536 74.03 +1 1767554..1768300 - 248 145594102 - Strop_1555 - hypothetical protein 1537 69.41 0 1768451..1768996 + 181 145594103 - Strop_1556 - plasmid pRiA4b ORF-3 family protein 1538 67.21 0 1769350..1770636 + 428 145594104 - Strop_1557 - extracellular solute-binding protein 1539 63.78 -1 1770862..1771830 + 322 145594105 - Strop_1558 - binding-protein-dependent transport systems inner membrane component 1540 63.58 -1 1771841..1772683 + 280 145594106 - Strop_1559 - binding-protein-dependent transport systems inner membrane component 1541 70.77 0 1772680..1774116 + 478 145594107 - Strop_1560 - glycoside hydrolase family protein 1542 71.25 0 1774193..1775239 + 348 145594108 - Strop_1561 - periplasmic binding protein/LacI transcriptional regulator 1543 70.05 0 1775340..1776551 - 403 145594109 - Strop_1562 - acyl-CoA dehydrogenase domain-containing protein 1544 72.21 0 1776551..1777615 - 354 145594110 - Strop_1563 - aminoglycoside phosphotransferase 1545 72.25 0 1777811..1778437 + 208 145594111 - Strop_1564 - GCN5-related N-acetyltransferase 1546 67.78 0 1778622..1778891 + 89 145594112 - Strop_1565 - hypothetical protein 1547 68.96 0 1779067..1779939 - 290 145594113 - Strop_1566 - triple helix repeat-containing collagen 1548 71.31 0 1780576..1782147 - 523 145594114 - Strop_1567 - aldehyde dehydrogenase 1549 75.28 +1 1782464..1782730 - 88 145594115 - Strop_1568 - hypothetical protein 1550 68.78 0 1782727..1783722 - 331 145594116 - Strop_1569 - biotin synthase 1551 75.37 +1 1783906..1785042 + 378 145594117 - Strop_1570 - 8-amino-7-oxononanoate synthase 1552 76.25 +2 1785030..1785770 + 246 145594118 - Strop_1571 - dethiobiotin synthase 1553 73.59 +1 1785780..1786949 - 389 145594119 - Strop_1572 - cytochrome P450 1554 74.74 +1 1786951..1787619 - 222 145594120 - Strop_1573 - methyltransferase type 12 1555 71.31 0 1787721..1788323 - 200 145594121 - Strop_1574 - regulatory protein, TetR 1556 74.52 +1 1789817..1790809 + 330 145594122 - Strop_1575 - NAD-dependent epimerase/dehydratase 1557 73.03 +1 1790836..1791810 - 324 145594123 - Strop_1576 - hypothetical protein 1558 69.64 0 1792088..1792726 + 212 145594124 - Strop_1577 - response regulator receiver 1559 71.95 0 1792787..1794508 - 573 145594125 - Strop_1578 - ATPase domain-containing protein 1560 73.19 +1 1794551..1795699 - 382 145594126 - Strop_1579 - hypothetical protein 1561 75.65 +1 1795730..1797610 + 626 145594127 - Strop_1580 - heavy metal translocating P-type ATPase 1562 76.01 +1 1797653..1798519 - 288 145594128 - Strop_1581 - UspA domain-containing protein 1563 68.62 0 1798516..1800918 - 800 145594129 - Strop_1582 - putative phosphoketolase 1564 72.00 0 1801017..1801841 - 274 145594130 - Strop_1583 - UspA domain-containing protein 1565 68.81 0 1802043..1803161 + 372 145594131 - Strop_1584 - hypothetical protein 1566 67.83 0 1803340..1805052 + 570 145594132 - Strop_1585 - regulator of chromosome condensation, RCC1 1567 70.83 0 1805110..1806621 - 503 145594133 - Strop_1586 - luciferase family protein 1568 61.67 -2 1806835..1807695 + 286 145594134 - Strop_1587 - helix-turn-helix domain-containing protein 1569 65.28 -1 1807695..1807910 + 71 145594135 - Strop_1588 - hypothetical protein 1570 66.88 0 1808109..1809062 + 317 145594136 - Strop_1589 - SpoOM family protein 1571 68.14 0 1809143..1809550 - 135 145594137 - Strop_1590 - hypothetical protein 1572 76.23 +2 1809757..1810164 + 135 145594138 - Strop_1591 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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