version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1439 72.42 0 1660669..1661589 - 306 145594005 - Strop_1458 - beta-lactamase 1440 73.10 +1 1661586..1662518 - 310 145594006 - Strop_1459 - regulatory protein, LysR 1441 75.20 +1 1662559..1663425 + 288 145594007 - Strop_1460 - rhodanese domain-containing protein 1442 71.83 0 1663545..1664726 + 393 145594008 - Strop_1461 - histone deacetylase superfamily protein 1443 73.76 +1 1664806..1667412 + 868 145594009 - Strop_1462 - GCN5-related N-acetyltransferase 1444 68.67 0 1667471..1668469 - 332 145594010 - Strop_1463 - RNA polymerase sigma factor SigB 1445 70.54 0 1668605..1669585 - 326 145594011 - Strop_1464 - transcriptional regulator TrmB 1446 67.26 0 1669720..1673412 - 1230 145594012 - Strop_1465 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1447 67.88 0 1673610..1677314 - 1234 145594013 - Strop_1466 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1448 71.63 0 1677425..1677847 - 140 145594014 - Strop_1467 - D-tyrosyl-tRNA(Tyr) deacylase 1449 72.26 0 1677847..1679331 - 494 145594015 - Strop_1468 - methyltransferase small 1450 68.63 0 1679669..1680025 + 118 145594016 - Strop_1469 - hypothetical protein 1451 76.14 +2 1680033..1680929 - 298 145594017 - Strop_1470 - ribokinase-like domain-containing protein 1452 71.08 0 1680926..1681900 - 324 145594018 - Strop_1471 - indigoidine synthase A family protein 1453 61.78 -2 1681933..1682157 + 74 145594019 - Strop_1472 - hypothetical protein 1454 71.11 0 1682403..1684136 + 577 145594020 - Strop_1473 - type III restriction enzyme, res subunit 1455 64.79 -1 1684289..1684555 - 88 145594021 - Strop_1474 - hypothetical protein 1456 69.18 0 1684802..1686430 - 542 145594022 - Strop_1475 - RNA polymerase sigma factor 1457 73.83 +1 1686714..1687523 + 269 145594023 - Strop_1476 - inositol-phosphate phosphatase 1458 67.05 0 1687558..1688082 - 174 145594024 - Strop_1477 - hypothetical protein 1459 68.35 0 1688500..1688796 + 98 145594025 - Strop_1478 - hypothetical protein 1460 73.61 +1 1688941..1689732 + 263 145594026 - Strop_1479 - hypothetical protein 1461 74.76 +1 1689809..1690339 - 176 145594027 - Strop_1480 - hypothetical protein 1462 74.91 +1 1690383..1690928 + 181 145594028 - Strop_1481 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 1463 73.54 +1 1691011..1691679 + 222 145594029 - Strop_1482 - hypothetical protein 1464 71.92 0 1691809..1692189 + 126 145594030 - Strop_1483 - nucleic acid binding, OB-fold, tRNA/helicase-type 1465 70.54 0 1692186..1692857 + 223 145594031 - Strop_1484 - hypothetical protein 1466 70.87 0 1692873..1693562 - 229 145594032 - Strop_1485 - TrkA domain-containing protein 1467 71.02 0 1693565..1694230 - 221 145594033 - Strop_1486 - TrkA domain-containing protein 1468 69.06 0 1694384..1696474 + 696 145594034 - Strop_1487 - hypothetical protein 1469 75.71 +1 1696471..1697709 + 412 145594035 - Strop_1488 - deoxyribonuclease 1470 71.53 0 1697751..1699784 + 677 145594036 - Strop_1489 - 1-deoxy-D-xylulose-5-phosphate synthase 1471 72.77 +1 1699854..1701050 - 398 145594037 - Strop_1490 - hypothetical protein 1472 71.02 0 1701189..1703096 + 635 145594038 - Strop_1491 - hypothetical protein 1473 68.34 0 1702965..1704692 - 575 145594039 - Strop_1492 - major facilitator transporter 1474 67.01 0 1704900..1705484 - 194 145594040 - Strop_1493 - NADPH-dependent FMN reductase 1475 66.27 0 1705648..1706145 + 165 145594041 - Strop_1494 - redox-sensitive transcriptional activator SoxR 1476 70.56 0 1706332..1708230 - 632 145594042 - Strop_1495 - hypothetical protein 1477 70.85 0 1708325..1708993 + 222 145594043 - Strop_1496 - response regulator receiver 1478 72.99 +1 1708990..1710159 + 389 145594044 - Strop_1497 - ATPase domain-containing protein 1479 68.62 0 1710447..1711880 + 477 145594045 - Strop_1498 - monooxygenase, FAD-binding 1480 68.48 0 1712082..1712357 + 91 145594046 - Strop_1499 - hypothetical protein 1481 68.64 0 1712871..1713377 - 168 145594047 - Strop_1500 - hypothetical protein 1482 67.41 0 1713371..1714042 - 223 145594048 - Strop_1501 - hydrolase 1483 67.20 0 1714192..1714566 + 124 145594049 - Strop_1502 - hypothetical protein 1484 66.33 0 1714748..1715641 + 297 145594050 - Strop_1503 - luciferase family protein 1485 70.24 0 1715701..1717017 - 438 145594051 - Strop_1504 - UDP-glucose 6-dehydrogenase 1486 65.16 -1 1716944..1717870 - 308 145594052 - Strop_1505 - methyltransferase type 11 1487 70.27 0 1718567..1718899 + 110 145594053 - Strop_1506 - hypothetical protein 1488 68.09 0 1718896..1719177 - 93 145594054 - Strop_1507 - hypothetical protein 1489 71.51 0 1719314..1719871 - 185 145594055 - Strop_1508 - hypothetical protein 1490 66.31 0 1720135..1720701 + 188 145594056 - Strop_1509 - hypothetical protein 1491 69.84 0 1721007..1723115 - 702 145594057 - Strop_1510 - hypothetical protein 1492 66.46 0 1723108..1723599 - 163 145594058 - Strop_1511 - hypothetical protein 1493 67.46 0 1723889..1724266 + 125 145594059 - Strop_1512 - hypothetical protein 1494 65.72 -1 1724537..1724959 - 140 145594060 - Strop_1513 - hypothetical protein 1495 66.81 0 1724916..1725617 - 233 145594061 - Strop_1514 - hypothetical protein 1496 67.61 0 1725871..1726083 - 70 145594062 - Strop_1515 - hypothetical protein 1497 64.78 -1 1726170..1726487 - 105 145594063 - Strop_1516 - hypothetical protein 1498 66.18 0 1726540..1726746 - 68 145594064 - Strop_1517 - hypothetical protein 1499 66.91 0 1726760..1727596 - 278 145594065 - Strop_1518 - helix-turn-helix domain-containing protein 1500 75.00 +1 1727872..1728195 + 107 145594066 - Strop_1519 - hypothetical protein 1501 77.01 +2 1728192..1728452 + 86 145594067 - Strop_1520 - hypothetical protein 1502 76.07 +1 1728532..1730562 + 676 145594068 - Strop_1521 - hypothetical protein 1503 68.06 0 1730635..1731924 - 429 145594069 - Strop_1522 - amidohydrolase 1504 73.10 +1 1732059..1732493 - 144 145594070 - Strop_1523 - GCN5-related N-acetyltransferase 1505 68.82 0 1732704..1734332 + 542 145594071 - Strop_1524 - ABC transporter related 1506 72.37 0 1734340..1735374 - 344 145594072 - Strop_1525 - hypothetical protein 1507 69.96 0 1735517..1737583 - 688 145594073 - Strop_1526 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 1508 70.59 0 1737639..1738835 - 398 145594074 - Strop_1527 - acetyl-CoA acetyltransferase 1509 74.26 +1 1738939..1740294 - 451 145594075 - Strop_1528 - 3'-5' exonuclease 1510 72.56 0 1740514..1741650 + 378 145594076 - Strop_1529 - peptidase S1 and S6, chymotrypsin/Hap 1511 71.78 0 1741736..1742557 + 273 145594077 - Strop_1530 - hypothetical protein 1512 71.67 0 1742601..1743200 - 199 145594078 - Strop_1531 - hypothetical protein 1513 70.25 0 1743345..1744460 + 371 145594079 - Strop_1532 - uroporphyrinogen decarboxylase 1514 74.40 +1 1744466..1745875 + 469 145594080 - Strop_1533 - protoporphyrinogen oxidase 1515 68.38 0 1745872..1746573 + 233 145594081 - Strop_1534 - chlorite dismutase 1516 69.65 0 1746684..1747052 - 122 145594082 - Strop_1535 - hypothetical protein 1517 67.91 0 1747148..1748032 + 294 145594083 - Strop_1536 - LysR, substrate-binding 1518 72.19 0 1748153..1748605 - 150 145594084 - Strop_1537 - GCN5-related N-acetyltransferase 1519 75.55 +1 1748589..1749500 - 303 145594085 - Strop_1538 - cytochrome c biogenesis protein, transmembrane region 1520 72.16 0 1749502..1750083 - 193 145594086 - Strop_1539 - redoxin domain-containing protein 1521 67.05 0 1750227..1750487 - 86 145594087 - Strop_1540 - hypothetical protein 1522 65.42 -1 1750774..1751334 - 186 145594088 - Strop_1541 - hypothetical protein 1523 67.56 0 1751794..1752240 - 148 145594089 - Strop_1542 - methionine-R-sulfoxide reductase 1524 71.05 0 1752252..1753277 + 341 145594090 - Strop_1543 - DNA primase, small subunit 1525 69.31 0 1753282..1753773 - 163 145594091 - Strop_1544 - GCN5-related N-acetyltransferase 1526 72.01 0 1753782..1755410 - 542 145594092 - Strop_1545 - TAP domain-containing protein 1527 70.27 0 1755385..1756494 - 369 145594093 ligC Strop_1546 - ATP-dependent DNA ligase 1528 74.14 +1 1756609..1757103 - 164 145594094 - Strop_1547 - GCN5-related N-acetyltransferase 1529 76.87 +2 1757235..1758155 - 306 145594095 - Strop_1548 - hypothetical protein 1530 75.41 +1 1758328..1759185 - 285 145594096 - Strop_1549 - hypothetical protein 1531 75.28 +1 1759185..1760171 - 328 145594097 - Strop_1550 - hypothetical protein 1532 75.64 +1 1760200..1762674 - 824 145594098 - Strop_1551 - SMC domain-containing protein 1533 73.19 +1 1762674..1763822 - 382 145594099 - Strop_1552 - nuclease SbcCD, D subunit 1534 70.84 0 1763836..1765584 - 582 145594100 - Strop_1553 - hypothetical protein 1535 69.35 0 1765770..1767449 + 559 145594101 - Strop_1554 - hypothetical protein 1536 74.03 +1 1767554..1768300 - 248 145594102 - Strop_1555 - hypothetical protein 1537 69.41 0 1768451..1768996 + 181 145594103 - Strop_1556 - plasmid pRiA4b ORF-3 family protein 1538 67.21 0 1769350..1770636 + 428 145594104 - Strop_1557 - extracellular solute-binding protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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