version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1403 70.14 0 1599856..1599999 + 47 145593969 - Strop_1421 - hypothetical protein 1404 74.86 +1 1600296..1601771 + 491 145593970 - Strop_1423 - major facilitator transporter 1405 69.65 0 1601762..1601962 + 66 145593971 - Strop_1424 - hypothetical protein 1406 68.19 0 1602144..1603190 + 348 145593972 - Strop_1425 - recA protein 1407 73.45 +1 1603201..1603863 + 220 145593973 - Strop_1426 - regulatory protein RecX 1408 71.87 0 1604349..1606115 + 588 145593974 - Strop_1427 - metal dependent phophohydrolase 1409 66.04 -1 1606270..1607232 - 320 145593975 - Strop_1428 - polar amino acid ABC transporter, inner membrane subunit 1410 65.54 -1 1607229..1607936 - 235 145593976 - Strop_1429 - polar amino acid ABC transporter, inner membrane subunit 1411 64.07 -1 1607977..1608861 - 294 145593977 - Strop_1430 - extracellular solute-binding protein 1412 67.34 0 1608917..1609663 - 248 145593978 - Strop_1431 - ABC transporter related 1413 70.83 0 1610043..1610522 + 159 145593979 - Strop_1432 - hypothetical protein 1414 71.81 0 1610646..1612805 + 719 145593980 - Strop_1433 - hypothetical protein 1415 60.26 -2 1615947..1617866 + 639 145593981 - Strop_1434 - hypothetical protein 1416 62.13 -2 1618771..1629084 + 3437 145593982 - Strop_1435 - hypothetical protein 1417 67.69 0 1629271..1630341 + 356 145593983 - Strop_1436 - hypothetical protein 1418 70.42 0 1630338..1631615 + 425 145593984 - Strop_1437 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1419 67.32 0 1631733..1635569 + 1278 145593985 - Strop_1438 - cell divisionFtsK/SpoIIIE 1420 70.82 0 1635566..1636984 + 472 145593986 - Strop_1439 - hypothetical protein 1421 69.73 0 1636991..1638394 + 467 145593987 - Strop_1440 - hypothetical protein 1422 67.79 0 1638416..1639480 - 354 145593988 - Strop_1441 - hypothetical protein 1423 70.00 0 1639752..1641251 + 499 145593989 - Strop_1442 - RNA modification protein 1424 70.55 0 1641364..1642572 - 402 145593990 - Strop_1443 - hypothetical protein 1425 73.84 +1 1642840..1643676 + 278 145593991 - Strop_1444 - hypothetical protein 1426 72.71 0 1643673..1644632 + 319 145593992 miaA Strop_1445 - tRNA delta(2)-isopentenylpyrophosphate transferase 1427 73.55 +1 1644640..1645482 + 280 145593993 - Strop_1446 - diaminopimelate epimerase 1428 70.82 0 1645546..1646772 - 408 145593994 - Strop_1447 - low molecular weight phosphotyrosine protein phosphatase 1429 69.78 0 1646985..1648526 - 513 145593995 - Strop_1448 - malate dehydrogenase 1430 69.83 0 1648673..1650157 + 494 145593996 - Strop_1449 - GTP-binding protein, HSR1-related 1431 71.60 0 1650165..1651784 + 539 145593997 - Strop_1450 - hypothetical protein 1432 69.97 0 1651828..1652613 - 261 145593998 - Strop_1451 - LexA repressor 1433 68.82 0 1653174..1653638 + 154 145593999 - Strop_1452 - transcriptional regulator NrdR 1434 67.67 0 1653774..1656665 + 963 145594000 - Strop_1453 - vitamin B12-dependent ribonucleotide reductase 1435 72.79 +1 1656815..1657369 + 184 145594001 - Strop_1454 - hypothetical protein 1436 72.54 0 1657506..1658390 + 294 145594002 - Strop_1455 - hypothetical protein 1437 70.53 0 1658708..1659406 - 232 145594003 - Strop_1456 - iron dependent repressor 1438 68.85 0 1659749..1660666 + 305 145594004 - Strop_1457 - Beta-lactamase 1439 72.42 0 1660669..1661589 - 306 145594005 - Strop_1458 - beta-lactamase 1440 73.10 +1 1661586..1662518 - 310 145594006 - Strop_1459 - regulatory protein, LysR 1441 75.20 +1 1662559..1663425 + 288 145594007 - Strop_1460 - rhodanese domain-containing protein 1442 71.83 0 1663545..1664726 + 393 145594008 - Strop_1461 - histone deacetylase superfamily protein 1443 73.76 +1 1664806..1667412 + 868 145594009 - Strop_1462 - GCN5-related N-acetyltransferase 1444 68.67 0 1667471..1668469 - 332 145594010 - Strop_1463 - RNA polymerase sigma factor SigB 1445 70.54 0 1668605..1669585 - 326 145594011 - Strop_1464 - transcriptional regulator TrmB 1446 67.26 0 1669720..1673412 - 1230 145594012 - Strop_1465 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1447 67.88 0 1673610..1677314 - 1234 145594013 - Strop_1466 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1448 71.63 0 1677425..1677847 - 140 145594014 - Strop_1467 - D-tyrosyl-tRNA(Tyr) deacylase 1449 72.26 0 1677847..1679331 - 494 145594015 - Strop_1468 - methyltransferase small 1450 68.63 0 1679669..1680025 + 118 145594016 - Strop_1469 - hypothetical protein 1451 76.14 +2 1680033..1680929 - 298 145594017 - Strop_1470 - ribokinase-like domain-containing protein 1452 71.08 0 1680926..1681900 - 324 145594018 - Strop_1471 - indigoidine synthase A family protein 1453 61.78 -2 1681933..1682157 + 74 145594019 - Strop_1472 - hypothetical protein 1454 71.11 0 1682403..1684136 + 577 145594020 - Strop_1473 - type III restriction enzyme, res subunit 1455 64.79 -1 1684289..1684555 - 88 145594021 - Strop_1474 - hypothetical protein 1456 69.18 0 1684802..1686430 - 542 145594022 - Strop_1475 - RNA polymerase sigma factor 1457 73.83 +1 1686714..1687523 + 269 145594023 - Strop_1476 - inositol-phosphate phosphatase 1458 67.05 0 1687558..1688082 - 174 145594024 - Strop_1477 - hypothetical protein 1459 68.35 0 1688500..1688796 + 98 145594025 - Strop_1478 - hypothetical protein 1460 73.61 +1 1688941..1689732 + 263 145594026 - Strop_1479 - hypothetical protein 1461 74.76 +1 1689809..1690339 - 176 145594027 - Strop_1480 - hypothetical protein 1462 74.91 +1 1690383..1690928 + 181 145594028 - Strop_1481 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 1463 73.54 +1 1691011..1691679 + 222 145594029 - Strop_1482 - hypothetical protein 1464 71.92 0 1691809..1692189 + 126 145594030 - Strop_1483 - nucleic acid binding, OB-fold, tRNA/helicase-type 1465 70.54 0 1692186..1692857 + 223 145594031 - Strop_1484 - hypothetical protein 1466 70.87 0 1692873..1693562 - 229 145594032 - Strop_1485 - TrkA domain-containing protein 1467 71.02 0 1693565..1694230 - 221 145594033 - Strop_1486 - TrkA domain-containing protein 1468 69.06 0 1694384..1696474 + 696 145594034 - Strop_1487 - hypothetical protein 1469 75.71 +1 1696471..1697709 + 412 145594035 - Strop_1488 - deoxyribonuclease 1470 71.53 0 1697751..1699784 + 677 145594036 - Strop_1489 - 1-deoxy-D-xylulose-5-phosphate synthase 1471 72.77 +1 1699854..1701050 - 398 145594037 - Strop_1490 - hypothetical protein 1472 71.02 0 1701189..1703096 + 635 145594038 - Strop_1491 - hypothetical protein 1473 68.34 0 1702965..1704692 - 575 145594039 - Strop_1492 - major facilitator transporter 1474 67.01 0 1704900..1705484 - 194 145594040 - Strop_1493 - NADPH-dependent FMN reductase 1475 66.27 0 1705648..1706145 + 165 145594041 - Strop_1494 - redox-sensitive transcriptional activator SoxR 1476 70.56 0 1706332..1708230 - 632 145594042 - Strop_1495 - hypothetical protein 1477 70.85 0 1708325..1708993 + 222 145594043 - Strop_1496 - response regulator receiver 1478 72.99 +1 1708990..1710159 + 389 145594044 - Strop_1497 - ATPase domain-containing protein 1479 68.62 0 1710447..1711880 + 477 145594045 - Strop_1498 - monooxygenase, FAD-binding 1480 68.48 0 1712082..1712357 + 91 145594046 - Strop_1499 - hypothetical protein 1481 68.64 0 1712871..1713377 - 168 145594047 - Strop_1500 - hypothetical protein 1482 67.41 0 1713371..1714042 - 223 145594048 - Strop_1501 - hydrolase 1483 67.20 0 1714192..1714566 + 124 145594049 - Strop_1502 - hypothetical protein 1484 66.33 0 1714748..1715641 + 297 145594050 - Strop_1503 - luciferase family protein 1485 70.24 0 1715701..1717017 - 438 145594051 - Strop_1504 - UDP-glucose 6-dehydrogenase 1486 65.16 -1 1716944..1717870 - 308 145594052 - Strop_1505 - methyltransferase type 11 1487 70.27 0 1718567..1718899 + 110 145594053 - Strop_1506 - hypothetical protein 1488 68.09 0 1718896..1719177 - 93 145594054 - Strop_1507 - hypothetical protein 1489 71.51 0 1719314..1719871 - 185 145594055 - Strop_1508 - hypothetical protein 1490 66.31 0 1720135..1720701 + 188 145594056 - Strop_1509 - hypothetical protein 1491 69.84 0 1721007..1723115 - 702 145594057 - Strop_1510 - hypothetical protein 1492 66.46 0 1723108..1723599 - 163 145594058 - Strop_1511 - hypothetical protein 1493 67.46 0 1723889..1724266 + 125 145594059 - Strop_1512 - hypothetical protein 1494 65.72 -1 1724537..1724959 - 140 145594060 - Strop_1513 - hypothetical protein 1495 66.81 0 1724916..1725617 - 233 145594061 - Strop_1514 - hypothetical protein 1496 67.61 0 1725871..1726083 - 70 145594062 - Strop_1515 - hypothetical protein 1497 64.78 -1 1726170..1726487 - 105 145594063 - Strop_1516 - hypothetical protein 1498 66.18 0 1726540..1726746 - 68 145594064 - Strop_1517 - hypothetical protein 1499 66.91 0 1726760..1727596 - 278 145594065 - Strop_1518 - helix-turn-helix domain-containing protein 1500 75.00 +1 1727872..1728195 + 107 145594066 - Strop_1519 - hypothetical protein 1501 77.01 +2 1728192..1728452 + 86 145594067 - Strop_1520 - hypothetical protein 1502 76.07 +1 1728532..1730562 + 676 145594068 - Strop_1521 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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