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Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1362 66.30 0 1548341..1548610 + 89 145593928 - Strop_1380 - ribosomal protein S15 1363 70.70 0 1548847..1551204 + 785 145593929 - Strop_1381 - polynucleotide phosphorylase/polyadenylase 1364 70.59 0 1551253..1552653 + 466 145593930 - Strop_1382 - peptidase M16 domain-containing protein 1365 71.39 0 1552755..1553537 + 260 145593931 - Strop_1383 - dihydrodipicolinate reductase 1366 75.26 +1 1553598..1554179 - 193 145593932 - Strop_1384 - GCN5-related N-acetyltransferase 1367 68.85 0 1554215..1555453 + 412 145593933 - Strop_1385 - hypothetical protein 1368 73.40 +1 1555461..1556693 + 410 145593934 - Strop_1386 - hypothetical protein 1369 72.31 0 1556690..1557292 + 200 145593935 - Strop_1387 - hypothetical protein 1370 68.82 0 1557493..1558236 + 247 145593936 thyX Strop_1388 - FAD-dependent thymidylate synthase 1371 70.01 0 1558283..1559209 + 308 145593937 - Strop_1389 - dihydrodipicolinate synthase 1372 69.39 0 1559262..1560950 + 562 145593938 - Strop_1390 - beta-lactamase domain-containing protein 1373 75.35 +1 1560986..1562620 - 544 145593939 - Strop_1391 - hypothetical protein 1374 71.70 0 1562617..1563093 - 158 145593940 - Strop_1392 - hypothetical protein 1375 70.68 0 1563206..1565671 + 821 145593941 - Strop_1393 - cell divisionFtsK/SpoIIIE 1376 66.67 0 1565721..1566035 - 104 145593942 - Strop_1394 - small multidrug resistance protein 1377 73.11 +1 1566061..1567038 + 325 145593943 - Strop_1395 - ornithine cyclodeaminase/mu-crystallin 1378 72.31 0 1567138..1568661 + 507 145593944 - Strop_1396 - MiaB-like tRNA modifying enzyme YliG 1379 68.95 0 1568658..1569227 + 189 145593945 - Strop_1397 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1380 74.62 +1 1569255..1569782 + 175 145593946 - Strop_1398 - CinA domain-containing protein 1381 70.64 0 1569984..1570436 + 150 145593947 - Strop_1399 - helix-turn-helix domain-containing protein 1382 70.56 0 1570585..1571457 + 290 145593948 - Strop_1400 - PspA/IM30 family protein 1383 77.31 +2 1571481..1572260 + 259 145593949 - Strop_1401 - hypothetical protein 1384 72.51 0 1572314..1576060 - 1248 145593950 - Strop_1402 - fibronectin, type III domain-containing protein 1385 70.20 0 1576170..1577018 - 282 145593951 - Strop_1403 - helix-turn-helix domain-containing protein 1386 64.74 -1 1577154..1577933 + 259 145593952 - Strop_1404 - NAD(P)H dehydrogenase (quinone) 1387 75.57 +1 1577952..1578737 - 261 145593953 - Strop_1405 - hypothetical protein 1388 74.61 +1 1578815..1583434 - 1539 145593954 - Strop_1406 - DEAD/DEAH box helicase domain-containing protein 1389 73.28 +1 1583609..1584001 + 130 145593955 - Strop_1407 - hypothetical protein 1390 68.98 0 1584160..1585716 + 518 145593956 - Strop_1408 - aminopeptidase Y 1391 70.57 0 1585894..1587252 + 452 145593957 - Strop_1409 - hypothetical protein 1392 71.08 0 1587249..1588313 + 354 145593958 - Strop_1410 - hypothetical protein 1393 72.52 0 1588337..1589275 + 312 145593959 - Strop_1411 - SpoOM family protein 1394 68.76 0 1589289..1589957 - 222 145593960 - Strop_1412 - leucine export protein LeuE 1395 68.82 0 1590094..1591533 - 479 145593961 - Strop_1413 - major facilitator transporter 1396 70.70 0 1591589..1592803 + 404 145593962 - Strop_1414 - hypothetical protein 1397 69.01 0 1592849..1593616 + 255 145593963 - Strop_1415 - hypothetical protein 1398 72.92 +1 1593607..1593798 + 63 145593964 - Strop_1416 - hypothetical protein 1399 71.97 0 1594158..1595570 - 470 145593965 - Strop_1417 - ATPase domain-containing protein 1400 70.11 0 1595567..1596322 - 251 145593966 - Strop_1418 - response regulator receiver 1401 73.53 +1 1596501..1597331 + 276 145593967 - Strop_1419 - hypothetical protein 1402 73.07 +1 1597383..1599614 + 743 145593968 - Strop_1420 - MMPL domain-containing protein 1403 70.14 0 1599856..1599999 + 47 145593969 - Strop_1421 - hypothetical protein 1404 74.86 +1 1600296..1601771 + 491 145593970 - Strop_1423 - major facilitator transporter 1405 69.65 0 1601762..1601962 + 66 145593971 - Strop_1424 - hypothetical protein 1406 68.19 0 1602144..1603190 + 348 145593972 - Strop_1425 - recA protein 1407 73.45 +1 1603201..1603863 + 220 145593973 - Strop_1426 - regulatory protein RecX 1408 71.87 0 1604349..1606115 + 588 145593974 - Strop_1427 - metal dependent phophohydrolase 1409 66.04 -1 1606270..1607232 - 320 145593975 - Strop_1428 - polar amino acid ABC transporter, inner membrane subunit 1410 65.54 -1 1607229..1607936 - 235 145593976 - Strop_1429 - polar amino acid ABC transporter, inner membrane subunit 1411 64.07 -1 1607977..1608861 - 294 145593977 - Strop_1430 - extracellular solute-binding protein 1412 67.34 0 1608917..1609663 - 248 145593978 - Strop_1431 - ABC transporter related 1413 70.83 0 1610043..1610522 + 159 145593979 - Strop_1432 - hypothetical protein 1414 71.81 0 1610646..1612805 + 719 145593980 - Strop_1433 - hypothetical protein 1415 60.26 -2 1615947..1617866 + 639 145593981 - Strop_1434 - hypothetical protein 1416 62.13 -2 1618771..1629084 + 3437 145593982 - Strop_1435 - hypothetical protein 1417 67.69 0 1629271..1630341 + 356 145593983 - Strop_1436 - hypothetical protein 1418 70.42 0 1630338..1631615 + 425 145593984 - Strop_1437 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1419 67.32 0 1631733..1635569 + 1278 145593985 - Strop_1438 - cell divisionFtsK/SpoIIIE 1420 70.82 0 1635566..1636984 + 472 145593986 - Strop_1439 - hypothetical protein 1421 69.73 0 1636991..1638394 + 467 145593987 - Strop_1440 - hypothetical protein 1422 67.79 0 1638416..1639480 - 354 145593988 - Strop_1441 - hypothetical protein 1423 70.00 0 1639752..1641251 + 499 145593989 - Strop_1442 - RNA modification protein 1424 70.55 0 1641364..1642572 - 402 145593990 - Strop_1443 - hypothetical protein 1425 73.84 +1 1642840..1643676 + 278 145593991 - Strop_1444 - hypothetical protein 1426 72.71 0 1643673..1644632 + 319 145593992 miaA Strop_1445 - tRNA delta(2)-isopentenylpyrophosphate transferase 1427 73.55 +1 1644640..1645482 + 280 145593993 - Strop_1446 - diaminopimelate epimerase 1428 70.82 0 1645546..1646772 - 408 145593994 - Strop_1447 - low molecular weight phosphotyrosine protein phosphatase 1429 69.78 0 1646985..1648526 - 513 145593995 - Strop_1448 - malate dehydrogenase 1430 69.83 0 1648673..1650157 + 494 145593996 - Strop_1449 - GTP-binding protein, HSR1-related 1431 71.60 0 1650165..1651784 + 539 145593997 - Strop_1450 - hypothetical protein 1432 69.97 0 1651828..1652613 - 261 145593998 - Strop_1451 - LexA repressor 1433 68.82 0 1653174..1653638 + 154 145593999 - Strop_1452 - transcriptional regulator NrdR 1434 67.67 0 1653774..1656665 + 963 145594000 - Strop_1453 - vitamin B12-dependent ribonucleotide reductase 1435 72.79 +1 1656815..1657369 + 184 145594001 - Strop_1454 - hypothetical protein 1436 72.54 0 1657506..1658390 + 294 145594002 - Strop_1455 - hypothetical protein 1437 70.53 0 1658708..1659406 - 232 145594003 - Strop_1456 - iron dependent repressor 1438 68.85 0 1659749..1660666 + 305 145594004 - Strop_1457 - Beta-lactamase 1439 72.42 0 1660669..1661589 - 306 145594005 - Strop_1458 - beta-lactamase 1440 73.10 +1 1661586..1662518 - 310 145594006 - Strop_1459 - regulatory protein, LysR 1441 75.20 +1 1662559..1663425 + 288 145594007 - Strop_1460 - rhodanese domain-containing protein 1442 71.83 0 1663545..1664726 + 393 145594008 - Strop_1461 - histone deacetylase superfamily protein 1443 73.76 +1 1664806..1667412 + 868 145594009 - Strop_1462 - GCN5-related N-acetyltransferase 1444 68.67 0 1667471..1668469 - 332 145594010 - Strop_1463 - RNA polymerase sigma factor SigB 1445 70.54 0 1668605..1669585 - 326 145594011 - Strop_1464 - transcriptional regulator TrmB 1446 67.26 0 1669720..1673412 - 1230 145594012 - Strop_1465 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1447 67.88 0 1673610..1677314 - 1234 145594013 - Strop_1466 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1448 71.63 0 1677425..1677847 - 140 145594014 - Strop_1467 - D-tyrosyl-tRNA(Tyr) deacylase 1449 72.26 0 1677847..1679331 - 494 145594015 - Strop_1468 - methyltransferase small 1450 68.63 0 1679669..1680025 + 118 145594016 - Strop_1469 - hypothetical protein 1451 76.14 +2 1680033..1680929 - 298 145594017 - Strop_1470 - ribokinase-like domain-containing protein 1452 71.08 0 1680926..1681900 - 324 145594018 - Strop_1471 - indigoidine synthase A family protein 1453 61.78 -2 1681933..1682157 + 74 145594019 - Strop_1472 - hypothetical protein 1454 71.11 0 1682403..1684136 + 577 145594020 - Strop_1473 - type III restriction enzyme, res subunit 1455 64.79 -1 1684289..1684555 - 88 145594021 - Strop_1474 - hypothetical protein 1456 69.18 0 1684802..1686430 - 542 145594022 - Strop_1475 - RNA polymerase sigma factor 1457 73.83 +1 1686714..1687523 + 269 145594023 - Strop_1476 - inositol-phosphate phosphatase 1458 67.05 0 1687558..1688082 - 174 145594024 - Strop_1477 - hypothetical protein 1459 68.35 0 1688500..1688796 + 98 145594025 - Strop_1478 - hypothetical protein 1460 73.61 +1 1688941..1689732 + 263 145594026 - Strop_1479 - hypothetical protein 1461 74.76 +1 1689809..1690339 - 176 145594027 - Strop_1480 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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