version 1.0
Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1304 73.50 +1 1482748..1484268 - 506 145593870 - Strop_1319 - Mg chelatase, subunit ChlI 1305 71.86 0 1484284..1484649 - 121 145593871 - Strop_1320 - hypothetical protein 1306 74.34 +1 1484660..1485988 - 442 145593872 - Strop_1321 - hypothetical protein 1307 67.45 0 1486252..1487139 + 295 145593873 - Strop_1322 - ribosomal protein S2 1308 67.63 0 1487229..1488056 + 275 145593874 - Strop_1323 - translation elongation factor Ts 1309 66.15 0 1488209..1488976 + 255 145593875 - Strop_1324 - uridylate kinase 1310 63.80 -1 1489045..1489602 + 185 145593876 - Strop_1325 - ribosome recycling factor 1311 71.55 0 1489788..1491242 + 484 145593877 - Strop_1326 - phosphatidate cytidylyltransferase 1312 69.02 0 1491428..1492489 + 353 145593878 - Strop_1327 - radical SAM protein 1313 72.93 +1 1492544..1493821 + 425 145593879 - Strop_1328 - hypothetical protein 1314 69.29 0 1493894..1494274 - 126 145593880 - Strop_1329 - hypothetical protein 1315 66.42 0 1494360..1495949 + 529 145593881 - Strop_1330 - Rieske (2Fe-2S) domain-containing protein 1316 73.31 +1 1495977..1497572 - 531 145593882 - Strop_1331 - FAD dependent oxidoreductase 1317 52.07 -2 1498434..1499036 + 200 145593883 - Strop_1333 - hypothetical protein 1318 67.65 0 1500682..1501089 - 135 145593884 - Strop_1335 - hypothetical protein 1319 64.60 -1 1502346..1503023 - 225 145593885 - Strop_1336 - helix-turn-helix domain-containing protein 1320 56.91 -2 1504175..1504738 + 187 145593886 - Strop_1337 - hypothetical protein 1321 66.18 0 1505128..1505334 - 68 145593887 - Strop_1338 - hypothetical protein 1322 65.39 -1 1505346..1506596 - 416 145593888 - Strop_1339 - cytochrome P450 1323 71.52 0 1506731..1508029 - 432 145593889 - Strop_1340 - hypothetical protein 1324 70.10 0 1508945..1509673 - 242 145593890 - Strop_1342 - ABC transporter related 1325 67.20 0 1509670..1510230 - 186 145593891 - Strop_1343 - transcriptional regulator PadR family protein 1326 68.44 0 1510337..1511068 + 243 145593892 - Strop_1344 - Clp N terminal domain-containing protein 1327 72.51 0 1511129..1511830 + 233 145593893 - Strop_1345 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1328 68.73 0 1511942..1512328 - 128 145593894 - Strop_1346 - glyoxalase/bleomycin resistance protein/dioxygenase 1329 70.78 0 1512341..1513360 + 339 145593895 - Strop_1347 - helix-turn-helix, type 11 domain-containing protein 1330 68.73 0 1513847..1514185 + 112 145593896 - Strop_1348 - hypothetical protein 1331 66.10 -1 1514439..1515320 + 293 145593897 - Strop_1349 - hypothetical protein 1332 72.69 0 1515628..1516839 + 403 145593898 - Strop_1350 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1333 70.10 0 1516839..1518089 + 416 145593899 - Strop_1351 - peptidase M50 1334 70.84 0 1518099..1519271 + 390 145593900 ispG Strop_1352 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1335 73.57 +1 1519351..1520190 + 279 145593901 - Strop_1353 - GCN5-related N-acetyltransferase 1336 70.66 0 1520380..1521381 - 333 145593902 - Strop_1354 - regulatory protein, MerR 1337 70.25 0 1521646..1522287 + 213 145593903 - Strop_1355 - hypothetical protein 1338 61.76 -2 1522358..1522663 + 101 145593904 - Strop_1356 - hypothetical protein 1339 74.00 +1 1522725..1526381 + 1218 145593905 - Strop_1357 - ABC transporter related 1340 71.64 0 1526482..1527789 - 435 145593906 - Strop_1358 - sodium:dicarboxylate symporter 1341 73.71 +1 1528107..1529312 + 401 145593907 - Strop_1359 - beta-ketoadipyl CoA thiolase 1342 69.24 0 1529316..1530287 + 323 145593908 - Strop_1360 - hypothetical protein 1343 70.90 0 1530293..1532488 + 731 145593909 - Strop_1361 - diguanylate cyclase 1344 65.38 -1 1532697..1533554 + 285 145593910 - Strop_1362 - methionine aminopeptidase, type I 1345 73.11 +1 1533551..1534264 + 237 145593911 - Strop_1363 - hypothetical protein 1346 68.96 0 1534277..1534756 - 159 145593912 - Strop_1364 - hypothetical protein 1347 74.89 +1 1534819..1535268 - 149 145593913 - Strop_1365 - hypothetical protein 1348 70.52 0 1535265..1535783 - 172 145593914 - Strop_1366 - hypothetical protein 1349 73.00 +1 1535939..1536601 + 220 145593915 - Strop_1367 - hypothetical protein 1350 68.68 0 1536598..1537641 + 347 145593916 nusA Strop_1368 - transcription elongation factor NusA 1351 69.97 0 1537657..1537989 + 110 145593917 - Strop_1369 - hypothetical protein 1352 72.80 +1 1538083..1541082 + 999 145593918 - Strop_1370 - translation initiation factor IF-2 1353 70.41 0 1541169..1541462 + 97 145593919 - Strop_1371 - hypothetical protein 1354 71.55 0 1541618..1542088 + 156 145593920 - Strop_1372 - ribosome-binding factor A 1355 72.59 0 1542085..1543131 + 348 145593921 - Strop_1373 - phosphoesterase domain-containing protein 1356 67.55 0 1543261..1543713 + 150 145593922 - Strop_1374 - hypothetical protein 1357 67.61 0 1543710..1543922 + 70 145593923 - Strop_1375 - hypothetical protein 1358 73.89 +1 1544417..1545745 + 442 145593924 - Strop_1376 - MATE efflux family protein 1359 70.30 0 1545815..1546117 - 100 145593925 - Strop_1377 - hypothetical protein 1360 72.97 +1 1546167..1547150 + 327 145593926 truB Strop_1378 - tRNA pseudouridine synthase B 1361 72.58 0 1547188..1548117 + 309 145593927 - Strop_1379 - riboflavin biosynthesis protein RibF 1362 66.30 0 1548341..1548610 + 89 145593928 - Strop_1380 - ribosomal protein S15 1363 70.70 0 1548847..1551204 + 785 145593929 - Strop_1381 - polynucleotide phosphorylase/polyadenylase 1364 70.59 0 1551253..1552653 + 466 145593930 - Strop_1382 - peptidase M16 domain-containing protein 1365 71.39 0 1552755..1553537 + 260 145593931 - Strop_1383 - dihydrodipicolinate reductase 1366 75.26 +1 1553598..1554179 - 193 145593932 - Strop_1384 - GCN5-related N-acetyltransferase 1367 68.85 0 1554215..1555453 + 412 145593933 - Strop_1385 - hypothetical protein 1368 73.40 +1 1555461..1556693 + 410 145593934 - Strop_1386 - hypothetical protein 1369 72.31 0 1556690..1557292 + 200 145593935 - Strop_1387 - hypothetical protein 1370 68.82 0 1557493..1558236 + 247 145593936 thyX Strop_1388 - FAD-dependent thymidylate synthase 1371 70.01 0 1558283..1559209 + 308 145593937 - Strop_1389 - dihydrodipicolinate synthase 1372 69.39 0 1559262..1560950 + 562 145593938 - Strop_1390 - beta-lactamase domain-containing protein 1373 75.35 +1 1560986..1562620 - 544 145593939 - Strop_1391 - hypothetical protein 1374 71.70 0 1562617..1563093 - 158 145593940 - Strop_1392 - hypothetical protein 1375 70.68 0 1563206..1565671 + 821 145593941 - Strop_1393 - cell divisionFtsK/SpoIIIE 1376 66.67 0 1565721..1566035 - 104 145593942 - Strop_1394 - small multidrug resistance protein 1377 73.11 +1 1566061..1567038 + 325 145593943 - Strop_1395 - ornithine cyclodeaminase/mu-crystallin 1378 72.31 0 1567138..1568661 + 507 145593944 - Strop_1396 - MiaB-like tRNA modifying enzyme YliG 1379 68.95 0 1568658..1569227 + 189 145593945 - Strop_1397 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1380 74.62 +1 1569255..1569782 + 175 145593946 - Strop_1398 - CinA domain-containing protein 1381 70.64 0 1569984..1570436 + 150 145593947 - Strop_1399 - helix-turn-helix domain-containing protein 1382 70.56 0 1570585..1571457 + 290 145593948 - Strop_1400 - PspA/IM30 family protein 1383 77.31 +2 1571481..1572260 + 259 145593949 - Strop_1401 - hypothetical protein 1384 72.51 0 1572314..1576060 - 1248 145593950 - Strop_1402 - fibronectin, type III domain-containing protein 1385 70.20 0 1576170..1577018 - 282 145593951 - Strop_1403 - helix-turn-helix domain-containing protein 1386 64.74 -1 1577154..1577933 + 259 145593952 - Strop_1404 - NAD(P)H dehydrogenase (quinone) 1387 75.57 +1 1577952..1578737 - 261 145593953 - Strop_1405 - hypothetical protein 1388 74.61 +1 1578815..1583434 - 1539 145593954 - Strop_1406 - DEAD/DEAH box helicase domain-containing protein 1389 73.28 +1 1583609..1584001 + 130 145593955 - Strop_1407 - hypothetical protein 1390 68.98 0 1584160..1585716 + 518 145593956 - Strop_1408 - aminopeptidase Y 1391 70.57 0 1585894..1587252 + 452 145593957 - Strop_1409 - hypothetical protein 1392 71.08 0 1587249..1588313 + 354 145593958 - Strop_1410 - hypothetical protein 1393 72.52 0 1588337..1589275 + 312 145593959 - Strop_1411 - SpoOM family protein 1394 68.76 0 1589289..1589957 - 222 145593960 - Strop_1412 - leucine export protein LeuE 1395 68.82 0 1590094..1591533 - 479 145593961 - Strop_1413 - major facilitator transporter 1396 70.70 0 1591589..1592803 + 404 145593962 - Strop_1414 - hypothetical protein 1397 69.01 0 1592849..1593616 + 255 145593963 - Strop_1415 - hypothetical protein 1398 72.92 +1 1593607..1593798 + 63 145593964 - Strop_1416 - hypothetical protein 1399 71.97 0 1594158..1595570 - 470 145593965 - Strop_1417 - ATPase domain-containing protein 1400 70.11 0 1595567..1596322 - 251 145593966 - Strop_1418 - response regulator receiver 1401 73.53 +1 1596501..1597331 + 276 145593967 - Strop_1419 - hypothetical protein 1402 73.07 +1 1597383..1599614 + 743 145593968 - Strop_1420 - MMPL domain-containing protein 1403 70.14 0 1599856..1599999 + 47 145593969 - Strop_1421 - hypothetical protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0