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Salinispora tropica CNB-440, complete genome - 1..5183331 4536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1259 62.82 -1 1435026..1435259 - 77 145593825 - Strop_1274 - AsnC/Lrp family regulatory protein 1260 74.42 +1 1435355..1436308 + 317 145593826 - Strop_1275 - thiamine monophosphate kinase 1261 70.30 0 1436337..1436804 + 155 145593827 - Strop_1276 - GCN5-related N-acetyltransferase 1262 67.19 0 1436896..1437087 - 63 145593828 rpmB Strop_1277 - 50S ribosomal protein L28 1263 75.34 +1 1437332..1438957 + 541 145593829 - Strop_1278 - Dak phosphatase 1264 72.66 0 1438954..1441155 + 733 145593830 - Strop_1279 - DEAD/DEAH box helicase domain-containing protein 1265 67.87 0 1441281..1442447 - 388 145593831 - Strop_1280 - cell wall anchor domain-containing protein 1266 74.29 +1 1442842..1443405 + 187 145593832 - Strop_1281 - putative methyltransferase 1267 62.78 -2 1443402..1443890 + 162 145593833 - Strop_1282 - pantetheine-phosphate adenylyltransferase 1268 67.27 0 1444092..1444589 + 165 145593834 - Strop_1283 - hypothetical protein 1269 68.79 0 1444736..1445299 + 187 145593835 - Strop_1284 - hypothetical protein 1270 71.26 0 1445305..1445478 + 57 145593836 rpmF Strop_1285 - 50S ribosomal protein L32 1271 74.72 +1 1445593..1446573 + 326 145593837 - Strop_1286 - fatty acid synthesis plsX protein 1272 71.94 0 1446570..1447328 + 252 145593838 - Strop_1287 - ribonuclease III 1273 71.88 0 1447321..1448184 + 287 145593839 - Strop_1288 - formamidopyrimidine-DNA glycosylase 1274 72.00 0 1448267..1449598 - 443 145593840 - Strop_1289 - Allergen V5/Tpx-1 family protein 1275 66.94 0 1449806..1450165 + 119 145593841 - Strop_1290 - hypothetical protein 1276 73.03 +1 1450546..1454142 + 1198 145593842 - Strop_1291 - chromosome segregation protein SMC 1277 73.88 +1 1454139..1454762 + 207 145593843 - Strop_1292 - HAD family hydrolase 1278 70.08 0 1454766..1455293 - 175 145593844 - Strop_1293 - hypothetical protein 1279 72.72 0 1455427..1457160 - 577 145593845 - Strop_1294 - hypothetical protein 1280 72.01 0 1457266..1458501 + 411 145593846 - Strop_1295 - signal recognition particle-docking protein FtsY 1281 71.06 0 1458512..1459399 + 295 145593847 - Strop_1296 - aminoglycoside phosphotransferase 1282 64.97 -1 1459637..1460935 + 432 145593848 - Strop_1297 - hypothetical protein 1283 68.49 0 1461341..1462711 + 456 145593849 - Strop_1298 - ammonium transporter 1284 66.95 0 1462757..1463110 + 117 145593850 - Strop_1299 - nitrogen regulatory protein P-II 1285 75.34 +1 1463137..1465431 + 764 145593851 - Strop_1300 - PII uridylyl-transferase 1286 68.67 0 1465598..1467142 + 514 145593852 - Strop_1301 - signal recognition particle protein 1287 73.15 +1 1467253..1468332 + 359 145593853 - Strop_1302 - amidohydrolase 1288 71.50 0 1468415..1469821 + 468 145593854 - Strop_1303 - prolyl-tRNA synthetase 1289 72.07 0 1469960..1470607 + 215 145593855 - Strop_1304 - hypothetical protein 1290 70.75 0 1470891..1471355 + 154 145593856 - Strop_1305 - ribosomal protein S16 1291 69.73 0 1471330..1471590 + 86 145593857 - Strop_1306 - hypothetical protein 1292 71.64 0 1471590..1472132 + 180 145593858 - Strop_1307 - 16S rRNA processing protein RimM 1293 72.48 0 1472233..1473006 + 257 145593859 - Strop_1308 - tRNA (guanine-N1)-methyltransferase 1294 64.71 -1 1473150..1473506 + 118 145593860 - Strop_1309 - ribosomal protein L19 1295 71.03 0 1473689..1474558 + 289 145593861 - Strop_1310 - signal peptidase I 1296 66.04 -1 1474569..1475210 + 213 145593862 - Strop_1311 - signal peptidase I 1297 71.46 0 1475376..1476188 + 270 145593863 - Strop_1312 - ribonuclease H 1298 58.02 -2 1476185..1476508 + 107 145593864 - Strop_1313 - hypothetical protein 1299 73.74 +1 1476887..1477381 + 164 145593865 - Strop_1314 - peptidase M23B 1300 71.51 0 1477636..1477986 + 116 145593866 - Strop_1315 - hypothetical protein 1301 63.46 -1 1479017..1480108 + 363 145593867 - Strop_1316 - inosine/uridine-preferring nucleoside hydrolase 1302 74.85 +1 1480362..1481339 - 325 145593868 - Strop_1317 - phage integrase family protein 1303 74.08 +1 1481417..1482751 - 444 145593869 - Strop_1318 - DNA protecting protein DprA 1304 73.50 +1 1482748..1484268 - 506 145593870 - Strop_1319 - Mg chelatase, subunit ChlI 1305 71.86 0 1484284..1484649 - 121 145593871 - Strop_1320 - hypothetical protein 1306 74.34 +1 1484660..1485988 - 442 145593872 - Strop_1321 - hypothetical protein 1307 67.45 0 1486252..1487139 + 295 145593873 - Strop_1322 - ribosomal protein S2 1308 67.63 0 1487229..1488056 + 275 145593874 - Strop_1323 - translation elongation factor Ts 1309 66.15 0 1488209..1488976 + 255 145593875 - Strop_1324 - uridylate kinase 1310 63.80 -1 1489045..1489602 + 185 145593876 - Strop_1325 - ribosome recycling factor 1311 71.55 0 1489788..1491242 + 484 145593877 - Strop_1326 - phosphatidate cytidylyltransferase 1312 69.02 0 1491428..1492489 + 353 145593878 - Strop_1327 - radical SAM protein 1313 72.93 +1 1492544..1493821 + 425 145593879 - Strop_1328 - hypothetical protein 1314 69.29 0 1493894..1494274 - 126 145593880 - Strop_1329 - hypothetical protein 1315 66.42 0 1494360..1495949 + 529 145593881 - Strop_1330 - Rieske (2Fe-2S) domain-containing protein 1316 73.31 +1 1495977..1497572 - 531 145593882 - Strop_1331 - FAD dependent oxidoreductase 1317 52.07 -2 1498434..1499036 + 200 145593883 - Strop_1333 - hypothetical protein 1318 67.65 0 1500682..1501089 - 135 145593884 - Strop_1335 - hypothetical protein 1319 64.60 -1 1502346..1503023 - 225 145593885 - Strop_1336 - helix-turn-helix domain-containing protein 1320 56.91 -2 1504175..1504738 + 187 145593886 - Strop_1337 - hypothetical protein 1321 66.18 0 1505128..1505334 - 68 145593887 - Strop_1338 - hypothetical protein 1322 65.39 -1 1505346..1506596 - 416 145593888 - Strop_1339 - cytochrome P450 1323 71.52 0 1506731..1508029 - 432 145593889 - Strop_1340 - hypothetical protein 1324 70.10 0 1508945..1509673 - 242 145593890 - Strop_1342 - ABC transporter related 1325 67.20 0 1509670..1510230 - 186 145593891 - Strop_1343 - transcriptional regulator PadR family protein 1326 68.44 0 1510337..1511068 + 243 145593892 - Strop_1344 - Clp N terminal domain-containing protein 1327 72.51 0 1511129..1511830 + 233 145593893 - Strop_1345 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1328 68.73 0 1511942..1512328 - 128 145593894 - Strop_1346 - glyoxalase/bleomycin resistance protein/dioxygenase 1329 70.78 0 1512341..1513360 + 339 145593895 - Strop_1347 - helix-turn-helix, type 11 domain-containing protein 1330 68.73 0 1513847..1514185 + 112 145593896 - Strop_1348 - hypothetical protein 1331 66.10 -1 1514439..1515320 + 293 145593897 - Strop_1349 - hypothetical protein 1332 72.69 0 1515628..1516839 + 403 145593898 - Strop_1350 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1333 70.10 0 1516839..1518089 + 416 145593899 - Strop_1351 - peptidase M50 1334 70.84 0 1518099..1519271 + 390 145593900 ispG Strop_1352 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1335 73.57 +1 1519351..1520190 + 279 145593901 - Strop_1353 - GCN5-related N-acetyltransferase 1336 70.66 0 1520380..1521381 - 333 145593902 - Strop_1354 - regulatory protein, MerR 1337 70.25 0 1521646..1522287 + 213 145593903 - Strop_1355 - hypothetical protein 1338 61.76 -2 1522358..1522663 + 101 145593904 - Strop_1356 - hypothetical protein 1339 74.00 +1 1522725..1526381 + 1218 145593905 - Strop_1357 - ABC transporter related 1340 71.64 0 1526482..1527789 - 435 145593906 - Strop_1358 - sodium:dicarboxylate symporter 1341 73.71 +1 1528107..1529312 + 401 145593907 - Strop_1359 - beta-ketoadipyl CoA thiolase 1342 69.24 0 1529316..1530287 + 323 145593908 - Strop_1360 - hypothetical protein 1343 70.90 0 1530293..1532488 + 731 145593909 - Strop_1361 - diguanylate cyclase 1344 65.38 -1 1532697..1533554 + 285 145593910 - Strop_1362 - methionine aminopeptidase, type I 1345 73.11 +1 1533551..1534264 + 237 145593911 - Strop_1363 - hypothetical protein 1346 68.96 0 1534277..1534756 - 159 145593912 - Strop_1364 - hypothetical protein 1347 74.89 +1 1534819..1535268 - 149 145593913 - Strop_1365 - hypothetical protein 1348 70.52 0 1535265..1535783 - 172 145593914 - Strop_1366 - hypothetical protein 1349 73.00 +1 1535939..1536601 + 220 145593915 - Strop_1367 - hypothetical protein 1350 68.68 0 1536598..1537641 + 347 145593916 nusA Strop_1368 - transcription elongation factor NusA 1351 69.97 0 1537657..1537989 + 110 145593917 - Strop_1369 - hypothetical protein 1352 72.80 +1 1538083..1541082 + 999 145593918 - Strop_1370 - translation initiation factor IF-2 1353 70.41 0 1541169..1541462 + 97 145593919 - Strop_1371 - hypothetical protein 1354 71.55 0 1541618..1542088 + 156 145593920 - Strop_1372 - ribosome-binding factor A 1355 72.59 0 1542085..1543131 + 348 145593921 - Strop_1373 - phosphoesterase domain-containing protein 1356 67.55 0 1543261..1543713 + 150 145593922 - Strop_1374 - hypothetical protein 1357 67.61 0 1543710..1543922 + 70 145593923 - Strop_1375 - hypothetical protein 1358 73.89 +1 1544417..1545745 + 442 145593924 - Strop_1376 - MATE efflux family protein 69.44 MEAN 3.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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