version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 362 55.30 0 393972..394103 + 43 197247359 - SeAg_B0396 - hypothetical protein 363 58.11 0 394310..395314 + 334 197250738 - SeAg_B0397 - AraC-family transcriptional regulator 364 52.69 0 395472..397568 + 698 197251193 - SeAg_B0398 - ferrichrome-iron receptor 365 54.03 0 397609..398241 - 210 197249347 - SeAg_B0399 - putative transport protein 366 44.20 -1 398473..398748 + 91 197249432 - SeAg_B0400 - protein YahO 367 55.60 0 398884..400509 - 541 197251644 prpR SeAg_B0401 - propionate catabolism operon regulatory protein PrpR 368 58.67 +1 400775..401662 + 295 197250852 prpB SeAg_B0402 - methylisocitrate lyase 369 55.04 0 401785..402954 + 389 197250290 prpC SeAg_B0403 - 2-methylcitrate synthase 370 56.89 0 402994..404445 + 483 197250681 prpD SeAg_B0404 - 2-methylcitrate dehydratase 371 58.51 +1 404486..406372 + 628 197249636 prpE SeAg_B0405 - propionate--CoA ligase 372 55.28 0 406476..407450 - 324 197248866 hemB SeAg_B0406 - delta-aminolevulinic acid dehydratase 373 19.17 -2 407670..407789 + 39 197247517 - SeAg_B0407 - hypothetical protein 374 32.48 -2 407780..407896 - 38 197248151 - SeAg_B0408 - hypothetical protein 375 47.14 0 408893..410935 + 680 197249831 - SeAg_B0409 - putative autotransporter/pertactin 376 53.20 0 411688..412845 - 385 197251539 - SeAg_B0411 - beta-lactamase 377 51.52 0 413192..414412 + 406 197250908 smbA SeAg_B0412 - protein SbmA 378 55.43 0 414427..415521 + 364 197248459 - SeAg_B0413 - putative outer membrane lipoprotein 379 54.05 0 415559..415867 - 102 197247801 - SeAg_B0414 - inner membrane protein YaiY 380 48.61 0 416135..416350 + 71 197250130 - SeAg_B0415 - hypothetical protein 381 51.96 0 416376..417470 - 364 197249513 - SeAg_B0416 - D-alanine--D-alanine ligase 382 54.82 0 417578..418261 + 227 197251128 - SeAg_B0417 - extensin family protein 383 52.39 0 418430..419641 + 403 197249926 - SeAg_B0418 - major facilitator superfamily MFS_1 384 46.74 0 419938..420198 + 86 197247479 - SeAg_B0419 - putative cytoplasmic protein 385 51.71 0 420548..420868 + 106 197251519 - SeAg_B0420 - psiF repeat domain protein 386 55.08 0 420960..422072 + 370 197251011 - SeAg_B0421 - AdrA protein 387 56.05 0 422087..422896 - 269 197248293 proC SeAg_B0422 - pyrroline-5-carboxylate reductase 388 44.67 -1 422930..423079 + 49 197249733 - SeAg_B0423 - hypothetical protein 389 58.11 0 423036..423491 + 151 197251635 - SeAg_B0424 - protein YaiI 390 58.42 +1 423676..424221 + 181 197249572 aroK SeAg_B0425 - shikimate kinase 391 52.60 0 424248..424439 + 63 197250343 - SeAg_B0426 - hypothetical protein 392 50.88 0 424690..425367 + 225 197248244 - SeAg_B0427 - aro operon protein 393 52.63 0 425438..425722 + 94 197247889 - SeAg_B0428 - protein YaiE 394 53.73 0 425765..426676 - 303 197247969 rdgC SeAg_B0429 - recombination-associated exonuclease RdgC 395 57.65 0 426802..427710 + 302 197247612 - SeAg_B0430 - N-acetyl-D-glucosamine kinase 396 55.92 0 427730..428902 - 390 197248102 - SeAg_B0431 - protein AraJ 397 58.17 +1 429075..432215 - 1046 197247629 - SeAg_B0432 - exonuclease SbcC 398 56.69 0 432212..433414 - 400 197249309 - SeAg_B0433 - ATP-dependent dsDNA exonuclease 399 43.94 -1 433457..433588 - 43 197248526 - SeAg_B0434 - hypothetical protein 400 55.36 0 433630..434319 + 229 197250808 phoB SeAg_B0435 - phosphate regulon transcriptional regulatory protein PhoB 401 53.47 0 434389..435684 + 431 197250186 phoR SeAg_B0436 - phosphate regulon sensor protein PhoR 402 45.33 0 435897..436046 - 49 197251880 - SeAg_B0437 - hypothetical protein 403 56.59 0 436093..437412 + 439 197251091 brnQ SeAg_B0438 - branched-chain amino acid transport system II carrier protein 404 53.60 0 437427..438857 + 476 197249029 - SeAg_B0439 - proline-specific permease ProY 405 57.87 0 439019..440836 + 605 197249511 - SeAg_B0440 - maltodextrin glucosidase 406 53.07 0 440908..441510 - 200 197248597 - SeAg_B0441 - peroxiredoxin-2 407 54.47 0 441720..442301 - 193 197249111 acpH SeAg_B0442 - [acyl-carrier-protein] phosphodiesterase 408 55.77 0 442395..443459 + 354 197248441 queA SeAg_B0443 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 409 52.48 0 443656..444783 + 375 197248843 tgt SeAg_B0444 - queuine tRNA-ribosyltransferase 410 52.25 0 444806..445138 + 110 197251743 yajC SeAg_B0445 - preprotein translocase, YajC subunit 411 54.60 0 445166..447013 + 615 197247540 secD SeAg_B0446 - protein-export membrane protein SecD 412 54.63 0 447024..447995 + 323 197250831 secF SeAg_B0447 - protein-export membrane protein SecF 413 46.15 0 447974..448090 - 38 197250466 - SeAg_B0449 - hypothetical protein 414 50.00 0 448089..448436 + 115 197250240 - SeAg_B0448 - HNH endonuclease 415 51.27 0 449066..449929 - 287 197250407 - SeAg_B0451 - nucleoside-specific channel-forming protein tsx 416 53.82 0 450229..450726 - 165 197249918 - SeAg_B0452 - lipoprotein 417 47.62 0 450801..450947 + 48 197251442 - SeAg_B0453 - hypothetical protein 418 50.00 0 450920..451369 + 149 197250916 nrdR SeAg_B0454 - transcriptional regulator, NrdR family 419 59.78 +1 451373..452476 + 367 197248845 ribD SeAg_B0455 - riboflavin biosynthesis protein RibD 420 54.35 0 452565..453035 + 156 197248504 ribH SeAg_B0456 - 6,7-dimethyl-8-ribityllumazine synthase 421 52.86 0 453056..453475 + 139 197249816 nusB SeAg_B0457 - transcription termination/antitermination factor NusB 422 56.98 0 453557..454537 + 326 197249517 thiL SeAg_B0458 - thiamine-monophosphate kinase 423 54.64 0 454524..455030 + 168 197249910 pgpA SeAg_B0459 - phosphatidylglycerophosphatase A 424 57.64 0 455134..456108 - 324 197249467 - SeAg_B0460 - oxidoreductase, aldo/keto reductase family 425 55.50 0 456165..458027 - 620 197249621 dxs SeAg_B0461 - 1-deoxy-D-xylulose-5-phosphate synthase 426 57.33 0 458051..458950 - 299 197248755 ispA SeAg_B0462 - geranyltranstransferase 427 54.32 0 458951..459193 - 80 197250253 xseB SeAg_B0463 - exodeoxyribonuclease VII, small subunit 428 52.73 0 459403..460851 + 482 197250561 thiI SeAg_B0464 - thiamine biosynthesis/tRNA modification protein ThiI 429 57.02 0 460895..461692 - 265 197250070 phnV SeAg_B0465 - 2-aminoethylphosphonate ABC transport system, membrane component PhnV 430 58.47 +1 462558..463667 - 369 197251314 phnT SeAg_B0467 - 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT 431 56.61 0 463673..464686 - 337 197247982 phnS SeAg_B0468 - 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein 432 58.89 +1 464884..465603 - 239 197247490 - SeAg_B0469 - transcriptional regulator protein 433 56.70 0 465743..466846 + 367 197248362 phnW SeAg_B0470 - 2-aminoethylphosphonate--pyruvate transaminase 434 59.14 +1 466856..467665 + 269 197251419 phnX SeAg_B0471 - phosphonoacetaldehyde hydrolase 435 56.85 0 467762..468352 - 196 197250355 - SeAg_B0472 - protein ThiJ 436 52.74 0 468315..469226 - 303 197248569 panE SeAg_B0473 - 2-dehydropantoate 2-reductase 437 51.63 0 469352..469843 + 163 197249428 - SeAg_B0474 - hypothetical protein 438 55.24 0 469890..471254 - 454 197247536 - SeAg_B0475 - inner membrane transport protein YajR 439 43.65 -1 471800..473311 + 503 197251172 - SeAg_B0476 - putative periplasmic protein 440 39.97 -1 473323..474813 + 496 197251704 - SeAg_B0477 - tetratricopeptide repeat protein 441 53.72 0 474898..475785 - 295 197250192 cyoE SeAg_B0478 - protoheme IX farnesyltransferase 442 51.52 0 475800..476129 - 109 197250726 cyoD SeAg_B0479 - cytochrome o ubiquinol oxidase, subunit IV 443 53.66 0 476129..476743 - 204 197251191 cyoC SeAg_B0480 - cytochrome o ubiquinol oxidase, subunit III 444 54.02 0 476733..478724 - 663 197250137 cyoB SeAg_B0481 - cytochrome o ubiquinol oxidase, subunit I 445 51.18 0 478735..479664 - 309 197250769 cyoA SeAg_B0482 - ubiquinol oxidase, subunit II 446 30.08 -2 479938..480060 - 40 197251119 - SeAg_B0483 - hypothetical protein 447 56.55 0 480144..481625 - 493 197251780 - SeAg_B0484 - MFS family, muropeptide transporter 448 49.69 0 482545..482862 + 105 197248768 - SeAg_B0486 - protein BolA 449 52.42 0 483209..484507 + 432 197249214 tig SeAg_B0487 - trigger factor 450 50.00 0 484646..485377 + 243 197249758 clpP SeAg_B0488 - ATP-dependent Clp protease, proteolytic subunit ClpP 451 52.67 0 485629..486900 + 423 197250772 clpX SeAg_B0489 - ATP-dependent Clp protease, ATP-binding subunit ClpX 452 53.80 0 487086..489440 + 784 197248560 lon SeAg_B0490 - ATP-dependent protease La 453 49.45 0 489649..489921 + 90 197249293 hupB SeAg_B0491 - DNA-binding protein HU-beta 454 52.35 0 490212..492083 + 623 197248545 ppiD SeAg_B0492 - peptidylprolyl isomerase 455 52.27 0 492233..492607 + 124 197249033 - SeAg_B0493 - competence protein ComEA 456 47.12 0 492711..493109 + 132 197248360 - SeAg_B0494 - thioesterase superfamily protein 457 53.45 0 493215..493910 - 231 197247660 - SeAg_B0495 - ExsB protein 458 56.26 0 493975..495675 - 566 197251580 - SeAg_B0496 - extracellular solute-binding protein, family 5 459 54.70 0 495776..496594 + 272 197251002 - SeAg_B0497 - protein cof 460 54.64 0 496643..497698 - 351 197250354 - SeAg_B0498 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 461 52.29 0 497811..498269 + 152 197249689 - SeAg_B0499 - glutamate uptake regulatory protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0