version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3798 52.48 0 3966379..3966519 + 46 197249610 rpmH SeAg_B4067 - ribosomal protein L34 3799 56.11 0 3966536..3966895 + 119 197249097 rnpA SeAg_B4068 - ribonuclease P protein component 3800 54.22 0 3967119..3968765 + 548 197249737 - SeAg_B4069 - inner membrane protein OxaA 3801 58.83 +1 3968867..3970270 + 467 197250655 trmE SeAg_B4070 - tRNA modification GTPase TrmE 3802 55.47 0 3970453..3971640 + 395 197251247 - SeAg_B4071 - multidrug resistance protein MdtL 3803 54.27 0 3971609..3972568 + 319 197248022 - SeAg_B4072 - HTH-type transcriptional regulator YidZ 3804 53.17 0 3972726..3973481 + 251 197251678 - SeAg_B4073 - o252 3805 55.73 0 3973499..3974065 + 188 197248068 - SeAg_B4074 - YieF 3806 56.50 0 3974543..3975880 - 445 197247591 - SeAg_B4075 - inorganic anion transporter, sulfate permease (SulP) family 3807 48.27 0 3976086..3976895 + 269 197250394 - SeAg_B4076 - hypothetical protein 3808 51.50 0 3976908..3977573 + 221 197249889 - SeAg_B4077 - phosphatase YieH 3809 55.23 0 3977668..3978393 - 241 197251471 phoU SeAg_B4078 - phosphate transport system regulatory protein PhoU 3810 52.47 0 3978408..3979217 - 269 197250904 pstB SeAg_B4079 - phosphate ABC transporter, ATP-binding protein 3811 56.00 0 3979268..3980158 - 296 197248484 pstA SeAg_B4080 - phosphate ABC transporter, permease protein PstA 3812 55.42 0 3980158..3981117 - 319 197247875 pstC SeAg_B4081 - phosphate ABC transporter, permease protein PstC 3813 54.18 0 3981253..3982293 - 346 197250890 pstS SeAg_B4082 - phosphate ABC transporter, periplasmic phosphate-binding protein PstS 3814 55.60 0 3982460..3983833 - 457 197248082 - SeAg_B4083 - pts system fructose-specific eiibc component 3815 53.11 0 3983882..3984700 - 272 197251758 - SeAg_B4084 - shikimate 5-dehydrogenase 3816 56.00 0 3984762..3986552 + 596 197251135 - SeAg_B4085 - HTH-type transcriptional regulator SgrR 3817 54.64 0 3986702..3988531 - 609 197249058 glmS SeAg_B4086 - glutamine-fructose-6-phosphate transaminase 3818 53.39 0 3988720..3990090 - 456 197250592 glmU SeAg_B4087 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 3819 50.36 0 3990410..3991108 - 232 197247467 - SeAg_B4088 - putative permease 3820 55.95 0 3991338..3991757 - 139 197249617 atpC SeAg_B4089 - ATP synthase F1, epsilon subunit 3821 55.10 0 3991778..3993160 - 460 197251677 atpD SeAg_B4090 - ATP synthase F1, beta subunit 3822 53.12 0 3993187..3994050 - 287 197251248 atpG SeAg_B4091 - ATP synthase F1, gamma subunit 3823 55.38 0 3994101..3995642 - 513 197250148 atpA SeAg_B4092 - ATP synthase F1, alpha subunit 3824 53.00 0 3995655..3996188 - 177 197251778 atpH SeAg_B4093 - ATP synthase F1, delta subunit 3825 52.23 0 3996203..3996673 - 156 197248823 atpF SeAg_B4094 - ATP synthase F0, B subunit 3826 54.58 0 3996733..3996972 - 79 197249919 atpE SeAg_B4095 - ATP synthase F0, C subunit 3827 51.72 0 3997019..3997834 - 271 197247601 atpB SeAg_B4096 - ATP synthase F0, A subunit 3828 50.00 0 3997843..3997968 - 41 197249508 atpI SeAg_B4097 - ATP synthase F0, I subunit 3829 38.19 -2 3998338..3998481 - 47 197251263 - SeAg_B4098 - hypothetical protein 3830 29.71 -2 3998589..3998726 - 45 197248487 - SeAg_B4099 - hypothetical protein 3831 51.44 0 3998839..3999462 - 207 197249483 gidB SeAg_B4100 - 16S rRNA methyltransferase GidB 3832 55.08 0 3999565..4001454 - 629 197250701 gidA SeAg_B4101 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3833 51.13 0 4001833..4002276 - 147 197249300 mioC SeAg_B4102 - MioC protein 3834 50.76 0 4002366..4002824 - 152 197248772 asnC SeAg_B4103 - regulatory protein AsnC 3835 56.50 0 4002975..4003967 + 330 197247977 asnA SeAg_B4104 - aspartate--ammonia ligase 3836 56.13 0 4003972..4005423 - 483 197247471 - SeAg_B4105 - protein ViaA 3837 54.18 0 4005417..4006913 - 498 197248009 - SeAg_B4106 - ATPase RavA 3838 53.40 0 4007261..4009129 + 622 197247356 kup SeAg_B4107 - potassium uptake protein 3839 50.00 0 4009346..4009765 + 139 197251905 rbsD SeAg_B4108 - cytoplasmic D-ribose-binding protein RbsD 3840 53.45 0 4009728..4011278 + 516 197251218 rbsA SeAg_B4109 - ribose ABC transporter, ATP-binding protein 3841 56.31 0 4011284..4012249 + 321 197250618 rbsC SeAg_B4110 - ribose ABC transporter, permease protein 3842 54.55 0 4012274..4013164 + 296 197249501 rbsB SeAg_B4111 - ribose ABC transporter, periplasmic ribose-binding protein 3843 55.59 0 4013297..4014226 + 309 197248467 rbsK SeAg_B4112 - ribokinase 3844 53.55 0 4014230..4015228 + 332 197247466 - SeAg_B4113 - transcriptional repressor for rbs operon 3845 52.17 0 4015194..4016621 - 475 197247839 - SeAg_B4114 - inner membrane transport protein YieO 3846 50.92 0 4016633..4017337 - 234 197251408 - SeAg_B4115 - transcriptional regulator, GntR family 3847 51.37 0 4023335..4024171 - 278 197251307 hdfR SeAg_B4123 - transcriptional regulator HdfR 3848 49.26 0 4024290..4024628 + 112 197250565 - SeAg_B4124 - hypothetical protein 3849 52.27 0 4024653..4026173 - 506 197250076 - SeAg_B4125 - Mg chelatase homolog 3850 56.04 0 4026763..4028409 + 548 197249289 ilvG SeAg_B4126 - acetolactate synthase, large subunit, isozyme II 3851 48.48 0 4028406..4028669 + 87 197247357 ilvM SeAg_B4127 - acetolactate synthase, isozyme II, small subunit 3852 55.59 0 4028687..4029616 + 309 197247880 ilvE SeAg_B4128 - branched-chain amino acid aminotransferase 3853 57.75 0 4029777..4031627 + 616 197248383 ilvD SeAg_B4129 - dihydroxy-acid dehydratase 3854 57.22 0 4031630..4033174 + 514 197251474 ilvA SeAg_B4130 - threonine ammonia-lyase, biosynthetic 3855 44.03 -1 4033457..4033774 + 105 197247403 - SeAg_B4131 - putative cytoplasmic protein 3856 45.61 0 4033771..4034112 + 113 197250269 - SeAg_B4132 - transcriptional regulator, XRE family 3857 59.12 +1 4034115..4035002 - 295 197250932 - SeAg_B4133 - HTH-type transcriptional regulator IlvY 3858 56.50 0 4035167..4036642 + 491 197249614 - SeAg_B4134 - ketol-acid reductoisomerase 3859 45.39 0 4036734..4037015 - 93 197249971 - SeAg_B4135 - peptidyl-prolyl cis-trans isomerase C 3860 49.57 0 4037209..4037910 + 233 197248553 - SeAg_B4136 - cyclic nucleotide-binding domain protein 3861 58.33 +1 4037939..4038682 + 247 197250577 - SeAg_B4137 - uridine phosphorylase 3862 51.37 0 4038679..4039410 + 243 197251335 - SeAg_B4138 - intergral membrane NMN transport protein PnuC 3863 52.94 0 4039510..4041534 + 674 197251744 rep SeAg_B4139 - ATP-dependent DNA helicase Rep 3864 55.67 0 4041574..4043055 - 493 197249975 - SeAg_B4140 - exopolyphosphatase 3865 54.82 0 4043174..4044439 - 421 197251034 rhlB SeAg_B4141 - ATP-dependent RNA helicase RhlB 3866 49.39 0 4044583..4044912 + 109 197249250 trx SeAg_B4142 - thioredoxin 3867 52.70 0 4045331..4046590 + 419 197249760 rho SeAg_B4143 - transcription termination factor Rho 3868 46.56 0 4046820..4047923 + 367 197247948 wecA SeAg_B4144 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3869 51.77 0 4047935..4048981 + 348 197249976 - SeAg_B4145 - modulator of enterobacterial common antigen 3870 52.25 0 4049037..4050167 + 376 197248311 - SeAg_B4146 - UDP-N-acetylglucosamine 2-epimerase 3871 57.32 0 4050164..4051426 + 420 197251445 wecC SeAg_B4147 - UDP-N-acetyl-D-mannosamine dehydrogenase 3872 55.62 0 4051426..4052493 + 355 197251098 rfbB2 SeAg_B4148 - dTDP-glucose 4,6-dehydratase 3873 56.00 0 4052526..4052750 + 74 197251719 - SeAg_B4149 - glucose-1-phosphate thymidylyltransferase 3874 58.11 0 4052728..4053405 + 225 197247495 wecD SeAg_B4150 - TDP-D-fucosamine acetyltransferase 3875 53.67 0 4053410..4054540 + 376 197248155 wecE SeAg_B4151 - TDP-4-keto-6-deoxy-D-glucose transaminase 3876 55.88 0 4054542..4055792 + 416 197250425 - SeAg_B4152 - polysaccharide biosynthesis protein 3877 55.00 0 4055789..4056868 + 359 197249932 wecF SeAg_B4153 - TDP-Fuc4NAc:lipid II Fuc4Nac transferase 3878 52.32 0 4056865..4058223 + 452 197249450 wzyE SeAg_B4154 - ECA biosynthesis protein WzyE 3879 56.01 0 4058220..4058960 + 246 197248949 - SeAg_B4155 - glycosyl transferase, WecB/TagA/CpsF family 3880 54.33 0 4059166..4060551 + 461 197247661 - SeAg_B4156 - amino acid permease family protein 3881 38.79 -1 4061115..4061279 + 54 197250083 - SeAg_B4161 - hypothetical protein 3882 57.67 0 4061668..4062867 - 399 197249193 hemY SeAg_B4163 - HemY protein 3883 55.56 0 4062867..4064036 - 389 197249096 - SeAg_B4164 - putative uroporphyrin-III C-methyltransferase 3884 57.62 0 4064058..4064798 - 246 197248146 hemD SeAg_B4165 - uroporphyrinogen-III synthase 3885 58.67 +1 4064795..4065757 - 320 197247501 hemC SeAg_B4166 - porphobilinogen deaminase 3886 54.53 0 4066113..4068659 + 848 197249543 cyaA SeAg_B4167 - adenylate cyclase, class I 3887 46.50 0 4068767..4069123 + 118 197249076 - SeAg_B4168 - putative inner membrane protein 3888 40.28 -1 4069492..4069851 + 119 197248266 - SeAg_B4169 - hypothetical protein 3889 53.89 0 4070296..4070616 - 106 197247751 cyaY SeAg_B4170 - iron donor protein CyaY 3890 50.51 0 4070686..4071075 - 129 197250971 - SeAg_B4171 - putative inner membrane protein 3891 53.43 0 4071772..4071975 + 67 197250513 - SeAg_B4174 - putative lipoprotein 3892 55.88 0 4072012..4072836 + 274 197249980 dapF SeAg_B4175 - diaminopimelate epimerase 3893 58.33 +1 4072833..4073540 + 235 197251817 - SeAg_B4176 - hypothetical protein 3894 56.59 0 4073537..4074439 + 300 197251815 xerC SeAg_B4177 - tyrosine recombinase XerC 3895 55.93 0 4074439..4075155 + 238 197251344 - SeAg_B4178 - HAD-superfamily hydrolase 3896 51.11 0 4075156..4075290 - 44 197247919 - SeAg_B4179 - hypothetical protein 3897 57.47 0 4075290..4077452 + 720 197247460 uvrD SeAg_B4180 - DNA helicase II 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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