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Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3722 52.32 0 3890159..3891106 + 315 197251164 - SeAg_B3990 - carboxylate/amino acid/amine transporter 3723 50.11 0 3891149..3892090 - 313 197248522 - SeAg_B3991 - hypothetical protein 3724 59.54 +1 3892326..3893069 - 247 197249342 - SeAg_B3992 - hypothetical protein 3725 57.66 0 3893056..3894165 - 369 197247758 - SeAg_B3993 - putative pyridoxal phosphate-dependent enzyme 3726 53.89 0 3894169..3895029 - 286 197248257 - SeAg_B3994 - PTS system mannose/fructose/sorbose family IID component 3727 56.53 0 3895026..3895775 - 249 197251325 - SeAg_B3995 - PTS system sorbose-specific iic component 3728 51.65 0 3895921..3896406 - 161 197250944 - SeAg_B3996 - PTS system sorbose subfamily IIB component 3729 59.15 +1 3896417..3896842 - 141 197251450 - SeAg_B3997 - PTS system fructose IIA component 3730 55.02 0 3897061..3899859 - 932 197249675 - SeAg_B3998 - sigma-54 dependent transcription regulator 3731 52.38 0 3900056..3900349 + 97 197250438 - SeAg_B3999 - hypothetical protein 3732 49.31 0 3900334..3900477 + 47 197248939 - SeAg_B4000 - hypothetical protein 3733 54.01 0 3900455..3901837 + 460 197248406 - SeAg_B4001 - beta-glucosidase 3734 46.67 0 3903306..3903665 + 119 197251438 - SeAg_B4003 - putative cytoplasmic protein 3735 48.15 0 3903649..3903972 + 107 197251777 - SeAg_B4004 - DNA-binding protein 3736 39.63 -1 3904063..3904332 - 89 197250361 - SeAg_B4005 - phosphotransferase system HPr enzyme 3737 43.21 -1 3904342..3905202 - 286 197250732 - SeAg_B4006 - fructose-1,6-bisphosphate aldolase, class II 3738 49.29 0 3905265..3906749 - 494 197248817 - SeAg_B4007 - putative sugar 3739 47.17 0 3906742..3908100 - 452 197249554 - SeAg_B4008 - PTS system, galactitol-specific IIC component 3740 39.24 -1 3908176..3908463 - 95 197247429 - SeAg_B4009 - putative IIB component of PTS system 3741 44.51 -1 3908460..3908933 - 157 197247930 - SeAg_B4010 - putative phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 3742 40.73 -1 3908951..3909694 - 247 197250053 - SeAg_B4011 - putative GntR-family transcriptional regulator 3743 51.66 0 3910047..3910499 - 150 197249714 - SeAg_B4012 - hypothetical protein 3744 55.03 0 3910692..3912083 - 463 197251614 uhpT SeAg_B4013 - hexose phosphate transport protein 3745 59.82 +1 3912226..3913554 - 442 197248421 uhpC SeAg_B4014 - regulatory protein UhpC 3746 61.54 +1 3913564..3915066 - 500 197247995 uhpB SeAg_B4015 - sensor histidine kinase UhpB 3747 58.54 +1 3915066..3915656 - 196 197247639 uhpA SeAg_B4016 - transcriptional regulatory protein UhpA 3748 56.41 0 3915731..3916744 - 337 197249581 - SeAg_B4017 - DeoX 3749 52.09 0 3916756..3918072 - 438 197248666 fucP SeAg_B4018 - L-fucose:H+ symporter permease 3750 48.97 0 3918103..3919023 - 306 197250534 rbsK SeAg_B4019 - ribokinase 3751 51.78 0 3919337..3920122 + 261 197250275 - SeAg_B4020 - deoxyribose operon repressor 3752 50.17 0 3920124..3920414 - 96 197248651 ilvN SeAg_B4021 - acetolactate synthase, isozyme I, small subunit 3753 55.83 0 3920418..3922106 - 562 197249687 ilvB SeAg_B4022 - acetolactate synthase, large subunit, biosynthetic type 3754 58.54 +1 3923127..3923987 + 286 197251898 - SeAg_B4023 - integral membrane protein 3755 58.06 0 3924190..3925374 + 394 197251256 emrD SeAg_B4024 - multidrug resistance protein D 3756 52.82 0 3926450..3927388 - 312 197248323 dsdC SeAg_B4025 - D-serine deaminase transcriptional activator 3757 56.20 0 3927599..3928936 + 445 197247631 - SeAg_B4026 - DsdX permease 3758 56.54 0 3928954..3930276 + 440 197248862 dsdA SeAg_B4027 - D-serine ammonia-lyase 3759 56.14 0 3930242..3930355 + 37 197248590 - SeAg_B4028 - hypothetical protein 3760 51.98 0 3930358..3930888 - 176 197250368 - SeAg_B4029 - f165 3761 52.34 0 3930885..3931247 - 120 197251876 - SeAg_B4030 - inner membrane protein YidG 3762 54.02 0 3931237..3931584 - 115 197247782 - SeAg_B4031 - inner membrane protein YidH 3763 43.70 -1 3931604..3931738 - 44 197247909 - SeAg_B4033 - hypothetical protein 3764 44.22 -1 3931720..3931866 + 48 197248429 - SeAg_B4032 - hypothetical protein 3765 55.66 0 3932028..3933689 - 553 197251363 - SeAg_B4034 - putative potassium uptake protein TrkA 3766 51.75 0 3933870..3934298 - 142 197249858 ibpB SeAg_B4035 - small heat shock protein IbpB 3767 49.76 0 3934408..3934827 - 139 197248828 ibpA SeAg_B4036 - small heat shock protein IbpA 3768 36.67 -2 3935085..3935204 - 39 197249235 - SeAg_B4038 - hypothetical protein 3769 54.98 0 3935173..3935463 + 96 197247423 - SeAg_B4037 - conserved outer membrane protein 3770 58.03 0 3935465..3936691 - 408 197247916 - SeAg_B4039 - putative cytoplasmic protein 3771 66.09 +2 3936813..3937856 - 347 197251355 - SeAg_B4040 - cytochrome c-type biogenesis protein H1 3772 62.90 +1 3937853..3938410 - 185 197251070 - SeAg_B4041 - thiol:disulfide interChange protein DsbE 3773 67.60 +2 3938407..3940338 - 643 197250344 ccmF SeAg_B4042 - cytochrome c-type biogenesis protein CcmF 3774 66.04 +2 3940335..3940814 - 159 197249855 - SeAg_B4043 - ABC superfamily 3775 73.56 +2 3940811..3940984 - 57 197251469 ccmD SeAg_B4044 - heme exporter protein CcmD 3776 65.06 +2 3941020..3941766 - 248 197250834 - SeAg_B4045 - ABC superfamily 3777 70.32 +2 3941809..3942465 - 218 197247463 ccmB SeAg_B4046 - heme exporter protein CcmB 3778 72.09 +2 3942465..3943091 - 208 197248109 ccmA SeAg_B4047 - heme ABC exporter, ATP-binding protein CcmA 3779 48.39 0 3943088..3944488 - 466 197251117 - SeAg_B4048 - cytoChrome-c peroxidase 3780 47.39 0 3944678..3945310 - 210 197251737 - SeAg_B4049 - chaperone protein TorD 3781 56.09 0 3945303..3947855 - 850 197251750 torA SeAg_B4050 - trimethylamine-N-oxide reductase TorA 3782 52.91 0 3947845..3949029 - 394 197251755 torC SeAg_B4051 - trimethylamine-N-oxide reductase c-type cytochrome TorC 3783 55.14 0 3949123..3949851 + 242 197250993 - SeAg_B4052 - TorCAD operon transcriptional regulatory protein TorR 3784 54.66 0 3949824..3950864 - 346 197251490 torT SeAg_B4053 - tmao reductase system periplasmic protein tort 3785 55.56 0 3950889..3951005 - 38 197248348 - SeAg_B4055 - hypothetical protein 3786 54.26 0 3950992..3953763 + 923 197247453 torS SeAg_B4054 - TMAO reductase sytem sensor TorS 3787 57.54 0 3953782..3954909 - 375 197250626 - SeAg_B4056 - hypothetical protein 3788 56.05 0 3954906..3956045 - 379 197250410 - SeAg_B4057 - outer membrane protein 3789 50.93 0 3956042..3957064 - 340 197251809 - SeAg_B4058 - hypothetical protein 3790 47.37 0 3957066..3957179 + 37 197251310 - SeAg_B4059 - hypothetical protein 3791 52.15 0 3957266..3958078 - 270 197250894 - SeAg_B4060 - phosphatase YidA 3792 32.62 -2 3958379..3958519 - 46 197249121 - SeAg_B4062 - hypothetical protein 3793 34.49 -2 3958518..3959210 + 230 197250223 - SeAg_B4061 - hypothetical protein 3794 55.69 0 3959549..3961963 - 804 197250721 gyrB SeAg_B4063 - DNA gyrase, B subunit 3795 54.56 0 3961992..3963065 - 357 197251211 - SeAg_B4064 - DNA replication and repair protein RecF 3796 56.95 0 3963213..3964313 - 366 197251713 dnaN SeAg_B4065 - DNA polymerase III, beta subunit 3797 52.89 0 3964318..3965718 - 466 197248955 dnaA SeAg_B4066 - chromosomal replication initiator protein DnaA 3798 52.48 0 3966379..3966519 + 46 197249610 rpmH SeAg_B4067 - ribosomal protein L34 3799 56.11 0 3966536..3966895 + 119 197249097 rnpA SeAg_B4068 - ribonuclease P protein component 3800 54.22 0 3967119..3968765 + 548 197249737 - SeAg_B4069 - inner membrane protein OxaA 3801 58.83 +1 3968867..3970270 + 467 197250655 trmE SeAg_B4070 - tRNA modification GTPase TrmE 3802 55.47 0 3970453..3971640 + 395 197251247 - SeAg_B4071 - multidrug resistance protein MdtL 3803 54.27 0 3971609..3972568 + 319 197248022 - SeAg_B4072 - HTH-type transcriptional regulator YidZ 3804 53.17 0 3972726..3973481 + 251 197251678 - SeAg_B4073 - o252 3805 55.73 0 3973499..3974065 + 188 197248068 - SeAg_B4074 - YieF 3806 56.50 0 3974543..3975880 - 445 197247591 - SeAg_B4075 - inorganic anion transporter, sulfate permease (SulP) family 3807 48.27 0 3976086..3976895 + 269 197250394 - SeAg_B4076 - hypothetical protein 3808 51.50 0 3976908..3977573 + 221 197249889 - SeAg_B4077 - phosphatase YieH 3809 55.23 0 3977668..3978393 - 241 197251471 phoU SeAg_B4078 - phosphate transport system regulatory protein PhoU 3810 52.47 0 3978408..3979217 - 269 197250904 pstB SeAg_B4079 - phosphate ABC transporter, ATP-binding protein 3811 56.00 0 3979268..3980158 - 296 197248484 pstA SeAg_B4080 - phosphate ABC transporter, permease protein PstA 3812 55.42 0 3980158..3981117 - 319 197247875 pstC SeAg_B4081 - phosphate ABC transporter, permease protein PstC 3813 54.18 0 3981253..3982293 - 346 197250890 pstS SeAg_B4082 - phosphate ABC transporter, periplasmic phosphate-binding protein PstS 3814 55.60 0 3982460..3983833 - 457 197248082 - SeAg_B4083 - pts system fructose-specific eiibc component 3815 53.11 0 3983882..3984700 - 272 197251758 - SeAg_B4084 - shikimate 5-dehydrogenase 3816 56.00 0 3984762..3986552 + 596 197251135 - SeAg_B4085 - HTH-type transcriptional regulator SgrR 3817 54.64 0 3986702..3988531 - 609 197249058 glmS SeAg_B4086 - glutamine-fructose-6-phosphate transaminase 3818 53.39 0 3988720..3990090 - 456 197250592 glmU SeAg_B4087 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 3819 50.36 0 3990410..3991108 - 232 197247467 - SeAg_B4088 - putative permease 3820 55.95 0 3991338..3991757 - 139 197249617 atpC SeAg_B4089 - ATP synthase F1, epsilon subunit 3821 55.10 0 3991778..3993160 - 460 197251677 atpD SeAg_B4090 - ATP synthase F1, beta subunit 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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