version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3696 58.17 +1 3856248..3858329 + 693 197251387 recG SeAg_B3961 - ATP-dependent DNA helicase RecG 3697 55.84 0 3858332..3859153 - 273 197251776 - SeAg_B3962 - putative cytoplasmic protein 3698 56.88 0 3859156..3860361 - 401 197250429 gltS SeAg_B3963 - sodium/glutamate symporter 3699 57.47 0 3860589..3861980 + 463 197250653 - SeAg_B3964 - uracil-xanthine permease 3700 56.02 0 3862101..3863810 + 569 197248871 - SeAg_B3965 - AsmA family protein 3701 56.14 0 3863913..3866231 - 772 197249110 - SeAg_B3966 - alpha-xylosidase 3702 54.52 0 3866243..3867625 - 460 197247427 - SeAg_B3967 - sodium:galactoside family symporter 3703 36.59 -2 3868953..3869075 - 40 197248176 - SeAg_B3969 - hypothetical protein 3704 39.67 -1 3869196..3870425 - 409 197250884 - SeAg_B3970 - putative fimbrial protein 3705 46.13 0 3870449..3871042 - 197 197249108 - SeAg_B3971 - fimbrial protein 3706 48.77 0 3871058..3871666 - 202 197248592 - SeAg_B3972 - hypothetical protein 3707 45.47 0 3871681..3872265 - 194 197250121 - SeAg_B3973 - fimbrial protein 3708 46.94 0 3872279..3874879 - 866 197249637 - SeAg_B3974 - outer membrane usher protein HtrE 3709 45.43 0 3874900..3875643 - 247 197251112 - SeAg_B3975 - pilin chaperone ecpD1 3710 49.28 0 3875787..3876413 - 208 197250483 - SeAg_B3976 - pilin chaperone ecpD2 3711 46.21 0 3877697..3877828 + 43 197248625 - SeAg_B3979 - hypothetical protein 3712 38.03 -2 3878564..3879181 + 205 197247783 - SeAg_B3980 - RmbA 3713 52.79 0 3879256..3882123 + 955 197247791 - SeAg_B3981 - outer membrane autotransporter barrel domain 3714 44.95 -1 3882217..3882681 - 154 197251826 - SeAg_B3982 - o94 3715 47.71 0 3882692..3883456 - 254 197251321 - SeAg_B3983 - transcriptional regulatory protein, C 3716 43.65 -1 3884153..3884278 + 41 197250615 - SeAg_B3984 - hypothetical protein 3717 52.57 0 3884333..3885013 + 226 197249311 - SeAg_B3985 - SlsA 3718 50.64 0 3885242..3885790 - 182 197248730 - SeAg_B3986 - putative inner membrane protein 3719 43.18 -1 3885929..3886060 + 43 197247440 - SeAg_B3987 - hypothetical protein 3720 52.62 0 3886057..3888783 - 908 197247925 mgtA SeAg_B3988 - magnesium-translocating P-type ATPase 3721 50.15 0 3889003..3889680 - 225 197251829 - SeAg_B3989 - protein MgtC 3722 52.32 0 3890159..3891106 + 315 197251164 - SeAg_B3990 - carboxylate/amino acid/amine transporter 3723 50.11 0 3891149..3892090 - 313 197248522 - SeAg_B3991 - hypothetical protein 3724 59.54 +1 3892326..3893069 - 247 197249342 - SeAg_B3992 - hypothetical protein 3725 57.66 0 3893056..3894165 - 369 197247758 - SeAg_B3993 - putative pyridoxal phosphate-dependent enzyme 3726 53.89 0 3894169..3895029 - 286 197248257 - SeAg_B3994 - PTS system mannose/fructose/sorbose family IID component 3727 56.53 0 3895026..3895775 - 249 197251325 - SeAg_B3995 - PTS system sorbose-specific iic component 3728 51.65 0 3895921..3896406 - 161 197250944 - SeAg_B3996 - PTS system sorbose subfamily IIB component 3729 59.15 +1 3896417..3896842 - 141 197251450 - SeAg_B3997 - PTS system fructose IIA component 3730 55.02 0 3897061..3899859 - 932 197249675 - SeAg_B3998 - sigma-54 dependent transcription regulator 3731 52.38 0 3900056..3900349 + 97 197250438 - SeAg_B3999 - hypothetical protein 3732 49.31 0 3900334..3900477 + 47 197248939 - SeAg_B4000 - hypothetical protein 3733 54.01 0 3900455..3901837 + 460 197248406 - SeAg_B4001 - beta-glucosidase 3734 46.67 0 3903306..3903665 + 119 197251438 - SeAg_B4003 - putative cytoplasmic protein 3735 48.15 0 3903649..3903972 + 107 197251777 - SeAg_B4004 - DNA-binding protein 3736 39.63 -1 3904063..3904332 - 89 197250361 - SeAg_B4005 - phosphotransferase system HPr enzyme 3737 43.21 -1 3904342..3905202 - 286 197250732 - SeAg_B4006 - fructose-1,6-bisphosphate aldolase, class II 3738 49.29 0 3905265..3906749 - 494 197248817 - SeAg_B4007 - putative sugar 3739 47.17 0 3906742..3908100 - 452 197249554 - SeAg_B4008 - PTS system, galactitol-specific IIC component 3740 39.24 -1 3908176..3908463 - 95 197247429 - SeAg_B4009 - putative IIB component of PTS system 3741 44.51 -1 3908460..3908933 - 157 197247930 - SeAg_B4010 - putative phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 3742 40.73 -1 3908951..3909694 - 247 197250053 - SeAg_B4011 - putative GntR-family transcriptional regulator 3743 51.66 0 3910047..3910499 - 150 197249714 - SeAg_B4012 - hypothetical protein 3744 55.03 0 3910692..3912083 - 463 197251614 uhpT SeAg_B4013 - hexose phosphate transport protein 3745 59.82 +1 3912226..3913554 - 442 197248421 uhpC SeAg_B4014 - regulatory protein UhpC 3746 61.54 +1 3913564..3915066 - 500 197247995 uhpB SeAg_B4015 - sensor histidine kinase UhpB 3747 58.54 +1 3915066..3915656 - 196 197247639 uhpA SeAg_B4016 - transcriptional regulatory protein UhpA 3748 56.41 0 3915731..3916744 - 337 197249581 - SeAg_B4017 - DeoX 3749 52.09 0 3916756..3918072 - 438 197248666 fucP SeAg_B4018 - L-fucose:H+ symporter permease 3750 48.97 0 3918103..3919023 - 306 197250534 rbsK SeAg_B4019 - ribokinase 3751 51.78 0 3919337..3920122 + 261 197250275 - SeAg_B4020 - deoxyribose operon repressor 3752 50.17 0 3920124..3920414 - 96 197248651 ilvN SeAg_B4021 - acetolactate synthase, isozyme I, small subunit 3753 55.83 0 3920418..3922106 - 562 197249687 ilvB SeAg_B4022 - acetolactate synthase, large subunit, biosynthetic type 3754 58.54 +1 3923127..3923987 + 286 197251898 - SeAg_B4023 - integral membrane protein 3755 58.06 0 3924190..3925374 + 394 197251256 emrD SeAg_B4024 - multidrug resistance protein D 3756 52.82 0 3926450..3927388 - 312 197248323 dsdC SeAg_B4025 - D-serine deaminase transcriptional activator 3757 56.20 0 3927599..3928936 + 445 197247631 - SeAg_B4026 - DsdX permease 3758 56.54 0 3928954..3930276 + 440 197248862 dsdA SeAg_B4027 - D-serine ammonia-lyase 3759 56.14 0 3930242..3930355 + 37 197248590 - SeAg_B4028 - hypothetical protein 3760 51.98 0 3930358..3930888 - 176 197250368 - SeAg_B4029 - f165 3761 52.34 0 3930885..3931247 - 120 197251876 - SeAg_B4030 - inner membrane protein YidG 3762 54.02 0 3931237..3931584 - 115 197247782 - SeAg_B4031 - inner membrane protein YidH 3763 43.70 -1 3931604..3931738 - 44 197247909 - SeAg_B4033 - hypothetical protein 3764 44.22 -1 3931720..3931866 + 48 197248429 - SeAg_B4032 - hypothetical protein 3765 55.66 0 3932028..3933689 - 553 197251363 - SeAg_B4034 - putative potassium uptake protein TrkA 3766 51.75 0 3933870..3934298 - 142 197249858 ibpB SeAg_B4035 - small heat shock protein IbpB 3767 49.76 0 3934408..3934827 - 139 197248828 ibpA SeAg_B4036 - small heat shock protein IbpA 3768 36.67 -2 3935085..3935204 - 39 197249235 - SeAg_B4038 - hypothetical protein 3769 54.98 0 3935173..3935463 + 96 197247423 - SeAg_B4037 - conserved outer membrane protein 3770 58.03 0 3935465..3936691 - 408 197247916 - SeAg_B4039 - putative cytoplasmic protein 3771 66.09 +2 3936813..3937856 - 347 197251355 - SeAg_B4040 - cytochrome c-type biogenesis protein H1 3772 62.90 +1 3937853..3938410 - 185 197251070 - SeAg_B4041 - thiol:disulfide interChange protein DsbE 3773 67.60 +2 3938407..3940338 - 643 197250344 ccmF SeAg_B4042 - cytochrome c-type biogenesis protein CcmF 3774 66.04 +2 3940335..3940814 - 159 197249855 - SeAg_B4043 - ABC superfamily 3775 73.56 +2 3940811..3940984 - 57 197251469 ccmD SeAg_B4044 - heme exporter protein CcmD 3776 65.06 +2 3941020..3941766 - 248 197250834 - SeAg_B4045 - ABC superfamily 3777 70.32 +2 3941809..3942465 - 218 197247463 ccmB SeAg_B4046 - heme exporter protein CcmB 3778 72.09 +2 3942465..3943091 - 208 197248109 ccmA SeAg_B4047 - heme ABC exporter, ATP-binding protein CcmA 3779 48.39 0 3943088..3944488 - 466 197251117 - SeAg_B4048 - cytoChrome-c peroxidase 3780 47.39 0 3944678..3945310 - 210 197251737 - SeAg_B4049 - chaperone protein TorD 3781 56.09 0 3945303..3947855 - 850 197251750 torA SeAg_B4050 - trimethylamine-N-oxide reductase TorA 3782 52.91 0 3947845..3949029 - 394 197251755 torC SeAg_B4051 - trimethylamine-N-oxide reductase c-type cytochrome TorC 3783 55.14 0 3949123..3949851 + 242 197250993 - SeAg_B4052 - TorCAD operon transcriptional regulatory protein TorR 3784 54.66 0 3949824..3950864 - 346 197251490 torT SeAg_B4053 - tmao reductase system periplasmic protein tort 3785 55.56 0 3950889..3951005 - 38 197248348 - SeAg_B4055 - hypothetical protein 3786 54.26 0 3950992..3953763 + 923 197247453 torS SeAg_B4054 - TMAO reductase sytem sensor TorS 3787 57.54 0 3953782..3954909 - 375 197250626 - SeAg_B4056 - hypothetical protein 3788 56.05 0 3954906..3956045 - 379 197250410 - SeAg_B4057 - outer membrane protein 3789 50.93 0 3956042..3957064 - 340 197251809 - SeAg_B4058 - hypothetical protein 3790 47.37 0 3957066..3957179 + 37 197251310 - SeAg_B4059 - hypothetical protein 3791 52.15 0 3957266..3958078 - 270 197250894 - SeAg_B4060 - phosphatase YidA 3792 32.62 -2 3958379..3958519 - 46 197249121 - SeAg_B4062 - hypothetical protein 3793 34.49 -2 3958518..3959210 + 230 197250223 - SeAg_B4061 - hypothetical protein 3794 55.69 0 3959549..3961963 - 804 197250721 gyrB SeAg_B4063 - DNA gyrase, B subunit 3795 54.56 0 3961992..3963065 - 357 197251211 - SeAg_B4064 - DNA replication and repair protein RecF 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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