version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3665 58.07 0 3825621..3826667 + 348 197250450 rfaF SeAg_B3929 - lipopolysaccharide heptosyltransferase II 3666 54.72 0 3826667..3827620 + 317 197248164 rfaC SeAg_B3930 - lipopolysaccharide heptosyltransferase I 3667 38.44 -2 3827660..3828874 + 404 197251849 - SeAg_B3931 - O-antigen ligase 3668 41.54 -1 3828930..3830075 - 381 197250021 - SeAg_B3932 - lipopolysaccharide 1,2-N-acetylglucosaminetransferase 3669 37.78 -2 3830175..3830984 - 269 197250198 - SeAg_B3933 - lipopolysaccharide core biosynthesis protein RfaZ 3670 33.33 -2 3831134..3831832 - 232 197250700 - SeAg_B3934 - lipopolysaccharide core biosynthesis protein RfaY 3671 34.72 -2 3831855..3832865 - 336 197248675 - SeAg_B3935 - lipopolysaccharide 1,2-glucosyltransferase 3672 37.67 -2 3832883..3833896 - 337 197249176 - SeAg_B3936 - lipopolysaccharide 1,3-galactosyltransferase 3673 39.17 -1 3833902..3834981 - 359 197251151 - SeAg_B3937 - lipopolysaccharide 1,6-galactosyltransferase 3674 45.99 0 3835315..3836112 - 265 197251670 - SeAg_B3938 - lipopolysaccharide core biosynthesis protein RfaP 3675 48.27 0 3836105..3837229 - 374 197250020 - SeAg_B3939 - lipopolysaccharide core biosynthesis protein RfaG 3676 47.62 0 3837226..3838296 - 356 197251087 - SeAg_B3940 - putative lipopolysaccharide heptosyltransferase III 3677 54.77 0 3838705..3839982 + 425 197247988 waaA SeAg_B3941 - 3-deoxy-D-manno-octulosonic-acid transferase 3678 53.33 0 3839991..3840470 + 159 197247364 coaD SeAg_B3942 - pantetheine-phosphate adenylyltransferase 3679 54.81 0 3840498..3841307 - 269 197249599 mutM SeAg_B3943 - formamidopyrimidine-DNA glycosylase 3680 39.88 -1 3841405..3841572 - 55 197250735 rpmG SeAg_B3944 - ribosomal protein L33 3681 51.90 0 3841593..3841829 - 78 197250195 rpmB SeAg_B3945 - ribosomal protein L28 3682 53.00 0 3842047..3842712 - 221 197251672 - SeAg_B3946 - DNA repair protein RadC 3683 55.56 0 3844086..3844544 + 152 197251628 dut SeAg_B3948 - dUTP diphosphatase 3684 51.76 0 3844652..3845248 + 198 197250997 - SeAg_B3949 - transcriptional regulator domain protein, TetR family 3685 54.21 0 3845326..3845967 - 213 197251591 pyrE SeAg_B3950 - orotate phosphoribosyltransferase 3686 55.51 0 3846046..3846762 - 238 197249680 rph SeAg_B3951 - ribonuclease PH 3687 52.89 0 3846888..3847751 + 287 197248992 - SeAg_B3952 - conserved hypothetical protein TIGR00255 3688 52.93 0 3847801..3848703 - 300 197248639 - SeAg_B3953 - transcriptional regulator, LysR family 3689 51.59 0 3848777..3849658 + 293 197249629 - SeAg_B3954 - beta-lactamase 3690 52.10 0 3849909..3850526 + 205 197248116 - SeAg_B3955 - inner membrane protein YicG 3691 56.05 0 3850523..3852208 - 561 197247797 ligA SeAg_B3956 - NAD-dependent DNA ligase adenylation domain protein 3692 49.68 0 3852465..3853088 + 207 197251205 gmk SeAg_B3957 - guanylate kinase 3693 53.26 0 3853143..3853418 + 91 197250989 rpoZ SeAg_B3958 - DNA-directed RNA polymerase, omega subunit 3694 53.46 0 3853437..3855548 + 703 197251589 - SeAg_B3959 - GTP pyrophosphokinase 3695 54.64 0 3855553..3856242 + 229 197250973 trmH SeAg_B3960 - tRNA guanosine-2'-O-methyltransferase 3696 58.17 +1 3856248..3858329 + 693 197251387 recG SeAg_B3961 - ATP-dependent DNA helicase RecG 3697 55.84 0 3858332..3859153 - 273 197251776 - SeAg_B3962 - putative cytoplasmic protein 3698 56.88 0 3859156..3860361 - 401 197250429 gltS SeAg_B3963 - sodium/glutamate symporter 3699 57.47 0 3860589..3861980 + 463 197250653 - SeAg_B3964 - uracil-xanthine permease 3700 56.02 0 3862101..3863810 + 569 197248871 - SeAg_B3965 - AsmA family protein 3701 56.14 0 3863913..3866231 - 772 197249110 - SeAg_B3966 - alpha-xylosidase 3702 54.52 0 3866243..3867625 - 460 197247427 - SeAg_B3967 - sodium:galactoside family symporter 3703 36.59 -2 3868953..3869075 - 40 197248176 - SeAg_B3969 - hypothetical protein 3704 39.67 -1 3869196..3870425 - 409 197250884 - SeAg_B3970 - putative fimbrial protein 3705 46.13 0 3870449..3871042 - 197 197249108 - SeAg_B3971 - fimbrial protein 3706 48.77 0 3871058..3871666 - 202 197248592 - SeAg_B3972 - hypothetical protein 3707 45.47 0 3871681..3872265 - 194 197250121 - SeAg_B3973 - fimbrial protein 3708 46.94 0 3872279..3874879 - 866 197249637 - SeAg_B3974 - outer membrane usher protein HtrE 3709 45.43 0 3874900..3875643 - 247 197251112 - SeAg_B3975 - pilin chaperone ecpD1 3710 49.28 0 3875787..3876413 - 208 197250483 - SeAg_B3976 - pilin chaperone ecpD2 3711 46.21 0 3877697..3877828 + 43 197248625 - SeAg_B3979 - hypothetical protein 3712 38.03 -2 3878564..3879181 + 205 197247783 - SeAg_B3980 - RmbA 3713 52.79 0 3879256..3882123 + 955 197247791 - SeAg_B3981 - outer membrane autotransporter barrel domain 3714 44.95 -1 3882217..3882681 - 154 197251826 - SeAg_B3982 - o94 3715 47.71 0 3882692..3883456 - 254 197251321 - SeAg_B3983 - transcriptional regulatory protein, C 3716 43.65 -1 3884153..3884278 + 41 197250615 - SeAg_B3984 - hypothetical protein 3717 52.57 0 3884333..3885013 + 226 197249311 - SeAg_B3985 - SlsA 3718 50.64 0 3885242..3885790 - 182 197248730 - SeAg_B3986 - putative inner membrane protein 3719 43.18 -1 3885929..3886060 + 43 197247440 - SeAg_B3987 - hypothetical protein 3720 52.62 0 3886057..3888783 - 908 197247925 mgtA SeAg_B3988 - magnesium-translocating P-type ATPase 3721 50.15 0 3889003..3889680 - 225 197251829 - SeAg_B3989 - protein MgtC 3722 52.32 0 3890159..3891106 + 315 197251164 - SeAg_B3990 - carboxylate/amino acid/amine transporter 3723 50.11 0 3891149..3892090 - 313 197248522 - SeAg_B3991 - hypothetical protein 3724 59.54 +1 3892326..3893069 - 247 197249342 - SeAg_B3992 - hypothetical protein 3725 57.66 0 3893056..3894165 - 369 197247758 - SeAg_B3993 - putative pyridoxal phosphate-dependent enzyme 3726 53.89 0 3894169..3895029 - 286 197248257 - SeAg_B3994 - PTS system mannose/fructose/sorbose family IID component 3727 56.53 0 3895026..3895775 - 249 197251325 - SeAg_B3995 - PTS system sorbose-specific iic component 3728 51.65 0 3895921..3896406 - 161 197250944 - SeAg_B3996 - PTS system sorbose subfamily IIB component 3729 59.15 +1 3896417..3896842 - 141 197251450 - SeAg_B3997 - PTS system fructose IIA component 3730 55.02 0 3897061..3899859 - 932 197249675 - SeAg_B3998 - sigma-54 dependent transcription regulator 3731 52.38 0 3900056..3900349 + 97 197250438 - SeAg_B3999 - hypothetical protein 3732 49.31 0 3900334..3900477 + 47 197248939 - SeAg_B4000 - hypothetical protein 3733 54.01 0 3900455..3901837 + 460 197248406 - SeAg_B4001 - beta-glucosidase 3734 46.67 0 3903306..3903665 + 119 197251438 - SeAg_B4003 - putative cytoplasmic protein 3735 48.15 0 3903649..3903972 + 107 197251777 - SeAg_B4004 - DNA-binding protein 3736 39.63 -1 3904063..3904332 - 89 197250361 - SeAg_B4005 - phosphotransferase system HPr enzyme 3737 43.21 -1 3904342..3905202 - 286 197250732 - SeAg_B4006 - fructose-1,6-bisphosphate aldolase, class II 3738 49.29 0 3905265..3906749 - 494 197248817 - SeAg_B4007 - putative sugar 3739 47.17 0 3906742..3908100 - 452 197249554 - SeAg_B4008 - PTS system, galactitol-specific IIC component 3740 39.24 -1 3908176..3908463 - 95 197247429 - SeAg_B4009 - putative IIB component of PTS system 3741 44.51 -1 3908460..3908933 - 157 197247930 - SeAg_B4010 - putative phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 3742 40.73 -1 3908951..3909694 - 247 197250053 - SeAg_B4011 - putative GntR-family transcriptional regulator 3743 51.66 0 3910047..3910499 - 150 197249714 - SeAg_B4012 - hypothetical protein 3744 55.03 0 3910692..3912083 - 463 197251614 uhpT SeAg_B4013 - hexose phosphate transport protein 3745 59.82 +1 3912226..3913554 - 442 197248421 uhpC SeAg_B4014 - regulatory protein UhpC 3746 61.54 +1 3913564..3915066 - 500 197247995 uhpB SeAg_B4015 - sensor histidine kinase UhpB 3747 58.54 +1 3915066..3915656 - 196 197247639 uhpA SeAg_B4016 - transcriptional regulatory protein UhpA 3748 56.41 0 3915731..3916744 - 337 197249581 - SeAg_B4017 - DeoX 3749 52.09 0 3916756..3918072 - 438 197248666 fucP SeAg_B4018 - L-fucose:H+ symporter permease 3750 48.97 0 3918103..3919023 - 306 197250534 rbsK SeAg_B4019 - ribokinase 3751 51.78 0 3919337..3920122 + 261 197250275 - SeAg_B4020 - deoxyribose operon repressor 3752 50.17 0 3920124..3920414 - 96 197248651 ilvN SeAg_B4021 - acetolactate synthase, isozyme I, small subunit 3753 55.83 0 3920418..3922106 - 562 197249687 ilvB SeAg_B4022 - acetolactate synthase, large subunit, biosynthetic type 3754 58.54 +1 3923127..3923987 + 286 197251898 - SeAg_B4023 - integral membrane protein 3755 58.06 0 3924190..3925374 + 394 197251256 emrD SeAg_B4024 - multidrug resistance protein D 3756 52.82 0 3926450..3927388 - 312 197248323 dsdC SeAg_B4025 - D-serine deaminase transcriptional activator 3757 56.20 0 3927599..3928936 + 445 197247631 - SeAg_B4026 - DsdX permease 3758 56.54 0 3928954..3930276 + 440 197248862 dsdA SeAg_B4027 - D-serine ammonia-lyase 3759 56.14 0 3930242..3930355 + 37 197248590 - SeAg_B4028 - hypothetical protein 3760 51.98 0 3930358..3930888 - 176 197250368 - SeAg_B4029 - f165 3761 52.34 0 3930885..3931247 - 120 197251876 - SeAg_B4030 - inner membrane protein YidG 3762 54.02 0 3931237..3931584 - 115 197247782 - SeAg_B4031 - inner membrane protein YidH 3763 43.70 -1 3931604..3931738 - 44 197247909 - SeAg_B4033 - hypothetical protein 3764 44.22 -1 3931720..3931866 + 48 197248429 - SeAg_B4032 - hypothetical protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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