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Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3557 50.83 0 3698941..3699969 + 342 197251814 - SeAg_B3815 - putative ribonuclease 3558 58.58 +1 3700320..3701642 + 440 197248058 - SeAg_B3816 - MFS transporter, metabolite:H+ symporter (MHS) family protein 3559 54.73 0 3701682..3703742 - 686 197248741 - SeAg_B3817 - AsmA family protein 3560 53.39 0 3703852..3704619 - 255 197250978 - SeAg_B3818 - diguanylate phosphodiesterase 3561 39.32 -1 3704678..3704794 - 38 197251352 - SeAg_B3819 - hypothetical protein 3562 53.83 0 3705831..3707318 - 495 197248000 - SeAg_B3821 - protein YhjJ 3563 53.61 0 3707538..3708824 - 428 197248968 dctA SeAg_B3822 - aerobic C4-dicarboxylate transport protein 3564 54.31 0 3708982..3710988 - 668 197249305 - SeAg_B3823 - protein YhjK 3565 60.24 +1 3711162..3714614 - 1150 197249812 - SeAg_B3824 - cellulose synthase operon protein C 3566 56.13 0 3714686..3715795 - 369 197251086 bcsZ SeAg_B3825 - cellulase 3567 57.15 0 3715799..3718078 - 759 197251564 - SeAg_B3826 - cyclic di-GMP-binding protein 3568 55.70 0 3718110..3720734 - 874 197251775 bcsA SeAg_B3827 - cellulose synthase 3569 59.36 +1 3720731..3721483 - 250 197249224 yhjQ SeAg_B3828 - cellulose synthase operon protein YhjQ 3570 45.59 0 3721484..3721687 - 67 197250543 - SeAg_B3829 - hypothetical protein 3571 40.35 -1 3721798..3721911 + 37 197251295 - SeAg_B3830 - hypothetical protein 3572 52.95 0 3721944..3723503 + 519 197251634 - SeAg_B3831 - putative cellulose biosynthesis protein BcsE 3573 48.44 0 3723500..3723691 + 63 197247673 bcsF SeAg_B3832 - celllulose biosynthesis operon protein BcsF/YhjT 3574 55.36 0 3723688..3725367 + 559 197247918 yhjU SeAg_B3833 - cellulose synthase operon protein YhjU 3575 48.23 0 3725930..3726070 + 46 197250624 - SeAg_B3836 - hypothetical protein 3576 43.88 -1 3726188..3727486 + 432 197250307 - SeAg_B3837 - inner membrane transport protein YhaO 3577 57.30 0 3727587..3728600 - 337 197247738 - SeAg_B3838 - dipeptide transport ATP-binding protein DppF 3578 55.69 0 3728597..3729580 - 327 197249575 dppD SeAg_B3839 - dipeptide ABC transporter, ATP-binding protein DppD 3579 60.02 +1 3729591..3730493 - 300 197248991 dppC SeAg_B3840 - dipeptide ABC transporter, permease protein DppC 3580 56.86 0 3730503..3731522 - 339 197251242 dppB SeAg_B3841 - dipeptide ABC transporter, permease protein DppB 3581 52.56 0 3731679..3733259 - 526 197250308 dppA SeAg_B3842 - dipeptide ABC transporter, periplasmic dipeptide-binding protein 3582 54.83 0 3733842..3735167 - 441 197247570 - SeAg_B3843 - xanthine/uracil/vitamin C permease 3583 56.89 0 3735225..3736349 - 374 197251487 - SeAg_B3844 - hypothetical protein 3584 60.02 +1 3736499..3737506 + 335 197249275 - SeAg_B3845 - transcriptional regulator, LacI-family 3585 52.42 0 3737986..3739677 - 563 197248754 - SeAg_B3848 - membrane-associated sulfatase 3586 50.57 0 3739895..3740422 - 175 197249989 - SeAg_B3849 - protein LpfE 3587 48.54 0 3740428..3741492 - 354 197248291 - SeAg_B3850 - protein LpfD 3588 55.52 0 3741510..3744038 - 842 197251067 - SeAg_B3851 - outer membrane usher protein FimD 3589 44.92 -1 3744061..3744759 - 232 197251605 - SeAg_B3852 - putative gram-negative pili assembly chaperone, N- domain 3590 47.62 0 3744844..3745368 - 174 197249190 - SeAg_B3853 - long polar fimbria protein A 3591 50.98 0 3745670..3745822 + 50 197249549 - SeAg_B3854 - hypothetical protein 3592 54.33 0 3745887..3746591 - 234 197247850 - SeAg_B3855 - putative lipase 3593 52.41 0 3746748..3747329 + 193 197248909 - SeAg_B3856 - dna-3-methyladenine glycosylase 1 3594 51.25 0 3747307..3747747 + 146 197251662 - SeAg_B3857 - acetyltransferase, gnat family 3595 57.71 0 3747716..3750049 - 777 197251174 - SeAg_B3858 - biotin sulfoxide reductase 3596 59.28 +1 3750202..3750864 + 220 197250152 - SeAg_B3859 - inner membrane lipoprotein YiaD 3597 57.33 0 3751094..3752068 + 324 197251751 - SeAg_B3860 - 2-ketogluconate reductase 3598 54.99 0 3752118..3752828 - 236 197250883 - SeAg_B3861 - hypothetical protein 3599 34.09 -2 3752978..3753109 - 43 197248371 - SeAg_B3862 - hypothetical protein 3600 46.05 0 3753267..3753557 + 96 197247414 - SeAg_B3863 - helix-turn-helix domain protein 3601 46.95 0 3753845..3754057 + 70 197249244 - SeAg_B3864 - cold shock DNA-binding protein 3602 49.63 0 3754232..3754771 + 179 197250594 - SeAg_B3865 - hypothetical protein 3603 47.57 0 3755616..3755882 - 88 197249973 - SeAg_B3866 - hypothetical protein 3604 57.20 0 3757583..3759652 - 689 197251342 glyS SeAg_B3868 - glycyl-tRNA synthetase, beta subunit 3605 55.70 0 3759662..3760573 - 303 197247944 glyQ SeAg_B3869 - glycyl-tRNA synthetase, alpha subunit 3606 48.31 0 3760712..3760918 - 68 197250559 - SeAg_B3871 - hypothetical protein 3607 46.41 0 3760902..3761054 + 50 197249935 - SeAg_B3870 - hypothetical protein 3608 48.39 0 3761180..3762175 + 331 197251540 - SeAg_B3872 - acyltransferase 3 3609 51.41 0 3762198..3762551 - 117 197247951 - SeAg_B3873 - putative inner membrane protein 3610 57.46 0 3762726..3764180 - 484 197248425 xylB SeAg_B3874 - xylulokinase 3611 53.29 0 3764280..3765602 - 440 197249264 xylA SeAg_B3875 - xylose isomerase 3612 52.84 0 3765965..3767143 + 392 197248760 - SeAg_B3876 - xylose operon regulatory protein 3613 50.97 0 3767204..3768127 - 307 197250595 bax SeAg_B3877 - protein bax 3614 55.52 0 3768344..3770371 + 675 197250004 - SeAg_B3878 - alpha-amylase 3615 53.24 0 3770546..3771796 + 416 197251882 - SeAg_B3879 - valine--pyruvate aminotransferase 3616 60.76 +1 3771833..3772306 - 157 197250554 - SeAg_B3880 - protein AegA 3617 52.93 0 3772423..3773223 - 266 197248301 - SeAg_B3881 - hth-type tranScriptional regulator yiaj 3618 56.16 0 3773453..3774451 + 332 197247648 - SeAg_B3882 - 2,3-diketo-L-gulonate reductase 3619 46.02 0 3774463..3774927 + 154 197251079 - SeAg_B3883 - YiaL 3620 51.55 0 3774951..3775883 + 310 197248110 - SeAg_B3884 - YiaX1 3621 46.62 0 3776022..3776495 + 157 197251722 - SeAg_B3885 - 2,3-diketo-l-gulonate trap transporter small permease protein yiam 3622 52.58 0 3776498..3777775 + 425 197250968 - SeAg_B3886 - 2,3-diketo-l-gulonate trap transporter large permease protein yian 3623 50.15 0 3777787..3778773 + 328 197250691 - SeAg_B3887 - trap transporter solute receptor, dctp family 3624 60.12 +1 3778777..3780273 + 498 197249969 - SeAg_B3888 - L-xylulose/3-keto-L-gulonate kinase 3625 60.78 +1 3780270..3780932 + 220 197249382 sgbH SeAg_B3889 - 3-keto-L-gulonate-6-phosphate decarboxylase SgbH 3626 57.14 0 3780925..3781785 + 286 197248774 - SeAg_B3890 - putative hexulose-6-phosphate isomerase 3627 58.62 +1 3781779..3782474 + 231 197251910 sgbE SeAg_B3891 - L-ribulose-5-phosphate 4-epimerase sgbE 3628 53.80 0 3782635..3783450 - 271 197250040 - SeAg_B3892 - putative transcriptional regulator 3629 56.90 0 3783714..3785669 + 651 197247483 - SeAg_B3893 - hypothetical protein 3630 55.43 0 3785843..3787381 - 512 197247946 aldB SeAg_B3894 - aldehyde dehydrogenase B 3631 56.80 0 3787550..3788431 + 293 197248758 - SeAg_B3895 - putative transcriptional regulator 3632 57.10 0 3788706..3790556 - 616 197249304 selB SeAg_B3896 - selenocysteine-specific translation elongation factor 3633 58.98 +1 3790553..3791944 - 463 197248722 selA SeAg_B3897 - L-seryl-tRNA selenium transferase 3634 54.84 0 3792043..3792651 - 202 197249257 - SeAg_B3898 - glutathione S-transferase, C- domain 3635 49.96 0 3792749..3793885 - 378 197250171 - SeAg_B3899 - secretion protein HlyD family protein 3636 49.04 0 3793888..3794250 - 120 197251673 - SeAg_B3900 - inner membrane protein YiaW 3637 54.98 0 3794784..3796700 + 638 197247504 - SeAg_B3901 - pts system mannitol-specific eiicba component 3638 53.79 0 3796931..3798079 + 382 197249223 mtlD SeAg_B3902 - mannitol-1-phosphate 5-dehydrogenase 3639 53.47 0 3798076..3798666 + 196 197251877 mtlR SeAg_B3903 - mannitol operon repressor 3640 48.10 0 3798676..3798885 - 69 197251249 - SeAg_B3904 - hypothetical protein 3641 51.52 0 3799176..3799538 + 120 197250576 - SeAg_B3905 - hypothetical protein 3642 38.30 -2 3800026..3800709 + 227 197249982 - SeAg_B3906 - hypothetical protein 3643 46.06 0 3800725..3800889 - 54 197249362 - SeAg_B3907 - hypothetical protein 3644 51.57 0 3800753..3805171 + 1472 197248710 - SeAg_B3908 - putative autotransporter 3645 57.31 0 3805470..3807125 + 551 197249352 lldP SeAg_B3909 - L-lactate permease 3646 58.17 +1 3807122..3807898 + 258 197248048 - SeAg_B3910 - putative L-lactate dehydrogenase operon regulatory protein LldR 3647 59.45 +1 3807895..3809085 + 396 197251856 - SeAg_B3911 - L-lactate dehydrogenase (cytochrome) 3648 56.12 0 3809150..3809623 + 157 197251230 - SeAg_B3912 - RNA methyltransferase, TrmH family, group 2 3649 54.45 0 3809691..3810746 - 351 197249593 - SeAg_B3914 - transcriptional regulator, LacI family 3650 37.70 -2 3810745..3810996 + 83 197249089 - SeAg_B3913 - hypothetical protein 3651 54.14 0 3811014..3812210 + 398 197248268 - SeAg_B3915 - mandelate racemase/muconate lactonizing enzyme 3652 48.21 0 3812284..3813594 + 436 197247731 - SeAg_B3916 - probable glucarate transporter 3653 55.84 0 3813677..3814498 - 273 197251385 - SeAg_B3917 - serine acetyltransferase 4 3654 57.55 0 3814576..3815595 - 339 197251066 - SeAg_B3918 - glycerol-3-phosphate dehydrogenase [NAD 3655 50.64 0 3815595..3816062 - 155 197250095 secB SeAg_B3919 - protein-export chaperone SecB 3656 50.79 0 3816106..3816357 - 83 197249661 grxC SeAg_B3920 - glutaredoxin 3 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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