version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3166 50.03 0 3303729..3305297 - 522 197249280 - SeAg_B3402 - methyl-accepting chemotaxis protein II 3167 55.62 0 3305685..3307205 - 506 197251726 - SeAg_B3403 - aerotaxis receptor 3168 34.62 -2 3307217..3307372 + 51 197251228 - SeAg_B3404 - hypothetical protein 3169 54.06 0 3307635..3309014 + 459 197247610 ygjG SeAg_B3405 - putrescine aminotransferase 3170 58.74 +1 3309185..3311203 + 672 197247696 - SeAg_B3406 - FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase family protein 3171 53.12 0 3311284..3312420 - 378 197248542 - SeAg_B3407 - methyltransferase family protein 3172 52.81 0 3312506..3313003 + 165 197249234 - SeAg_B3408 - hypothetical protein 3173 53.79 0 3313035..3313166 - 43 197247792 - SeAg_B3410 - hypothetical protein 3174 54.40 0 3313155..3313847 + 230 197248296 - SeAg_B3409 - SanA protein 3175 53.53 0 3313899..3314933 + 344 197248530 - SeAg_B3411 - putative oxidoreductase YgjR 3176 51.97 0 3315159..3316172 + 337 197249570 - SeAg_B3412 - inner membrane protein alx 3177 55.98 0 3316427..3317671 + 414 197249839 - SeAg_B3413 - serine/threonine transporter SstT 3178 52.64 0 3318121..3318783 + 220 197249103 - SeAg_B3414 - inner membrane protein YqjA 3179 51.99 0 3318844..3319170 + 108 197249515 - SeAg_B3415 - hypothetical protein 3180 47.97 0 3319315..3319683 + 122 197248732 - SeAg_B3416 - hypothetical protein 3181 55.56 0 3319725..3320030 + 101 197250529 - SeAg_B3417 - hypothetical protein 3182 53.88 0 3320033..3320431 + 132 197250068 - SeAg_B3418 - hypothetical protein 3183 60.00 +1 3320428..3320727 + 99 197249480 - SeAg_B3419 - hypothetical protein 3184 49.18 0 3320872..3321357 + 161 197248977 - SeAg_B3420 - putative inner membrane protein YqjF 3185 52.89 0 3321425..3322411 + 328 197250405 - SeAg_B3421 - hypothetical protein 3186 52.46 0 3322535..3322900 + 121 197249911 - SeAg_B3422 - inner membrane protein YhaH 3187 56.63 0 3322939..3323835 - 298 197250921 - SeAg_B3423 - transcriptional regulator, LysR family 3188 54.42 0 3323940..3324641 + 233 197248215 - SeAg_B3424 - pirin family protein 3189 59.39 +1 3324665..3324829 + 54 197250017 - SeAg_B3425 - putative cytoplasmic protein 3190 56.52 0 3324942..3326252 - 436 197249313 - SeAg_B3426 - putative inner membrane protein 3191 49.79 0 3326278..3327717 - 479 197251039 - SeAg_B3427 - inner membrane transport protein YhaO 3192 56.56 0 3327925..3329289 - 454 197250228 - SeAg_B3428 - L-serine ammonia-lyase 3193 54.86 0 3329359..3331653 - 764 197247431 pflB SeAg_B3429 - formate acetyltransferase 3194 49.88 0 3331687..3332895 - 402 197247786 ackA SeAg_B3430 - acetate kinase 3195 50.83 0 3332962..3334293 - 443 197249606 tdcC SeAg_B3431 - threonine/serine transporter 3196 46.06 0 3334314..3335303 - 329 197248964 tdcB SeAg_B3432 - threonine dehydratase, catabolic 3197 44.41 -1 3335401..3336339 - 312 197248337 - SeAg_B3433 - TDC operon transcriptional activator 3198 42.64 -1 3336880..3337008 - 42 197248374 - SeAg_B3434 - hypothetical protein 3199 56.68 0 3339033..3339923 - 296 197250953 - SeAg_B3438 - 2-hydroxy-3-oxopropionate reductase 3200 55.12 0 3339949..3340719 - 256 197250457 garL SeAg_B3439 - 2-dehydro-3-deoxyglucarate aldolase 3201 34.75 -2 3340823..3340963 - 46 197247358 - SeAg_B3440 - hypothetical protein 3202 39.53 -1 3340963..3341091 + 42 197251465 - SeAg_B3441 - hypothetical protein 3203 56.93 0 3341237..3342808 + 523 197248398 garD SeAg_B3442 - galactarate dehydratase 3204 50.15 0 3342928..3343920 + 330 197247886 - SeAg_B3443 - class II aldolase, tagatose bisphosphate family 3205 51.28 0 3343986..3345311 + 441 197251584 - SeAg_B3444 - D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 3206 53.98 0 3345326..3345790 + 154 197251142 - SeAg_B3445 - galactitol-specific phosphotransferase enzyme iia component 3207 48.77 0 3345821..3346105 + 94 197249652 - SeAg_B3446 - galactitol-specific phosphotransferase enzyme iib component 3208 55.09 0 3346109..3347482 + 457 197250085 - SeAg_B3447 - PTS family galactitol-specific enzyme IIC 3209 54.98 0 3347526..3348569 + 347 197248610 - SeAg_B3448 - galactitol-1-phosphate 5-dehydrogenase 3210 50.65 0 3348680..3349453 + 257 197249109 - SeAg_B3449 - galactitol utilization operon repressor 3211 54.98 0 3349611..3350474 - 287 197249953 - SeAg_B3450 - hypothetical protein 3212 58.35 +1 3350538..3352580 + 680 197250590 - SeAg_B3451 - LppC superfamily 3213 56.06 0 3352538..3352933 + 131 197249358 - SeAg_B3452 - conserved hypothetical protein TIGR00252 3214 51.78 0 3352955..3353545 + 196 197249348 diaA SeAg_B3453 - DnaA initiator-associating protein DiaA 3215 56.42 0 3353555..3354130 + 191 197247508 - SeAg_B3454 - putative phospholipid-binding domain protein 3216 57.70 0 3354197..3354832 - 211 197251333 - SeAg_B3455 - NAD dependent epimerase/dehydratase family protein 3217 53.56 0 3354963..3355481 + 172 197249116 - SeAg_B3456 - intracellular protease 1 3218 57.21 0 3355461..3355904 - 147 197249586 - SeAg_B3458 - protein YhbP 3219 53.17 0 3355897..3356259 + 120 197248186 - SeAg_B3457 - protein YhbQ 3220 56.55 0 3356246..3356749 - 167 197247393 - SeAg_B3459 - acetyltransferase, GNAT family 3221 51.43 0 3356743..3357267 - 174 197248626 - SeAg_B3460 - sterol-binding protein 3222 58.53 +1 3357484..3358479 + 331 197249101 - SeAg_B3461 - peptidase, U32 family 3223 56.09 0 3358488..3359366 + 292 197247721 - SeAg_B3462 - peptidase, U32 family 3224 57.54 0 3359543..3360550 + 335 197251353 - SeAg_B3463 - luciferase family protein 3225 45.97 0 3360528..3361247 - 239 197248083 - SeAg_B3464 - 2-dehydro-3-deoxyphosphooctonate aldolase 3226 40.30 -1 3361406..3361936 + 176 197248882 - SeAg_B3465 - putative cytoplasmic protein 3227 55.50 0 3361998..3363242 - 414 197248496 mtr SeAg_B3466 - tryptophan-specific transport protein Mtr 3228 58.20 +1 3363396..3365285 - 629 197249912 deaD SeAg_B3467 - cold-shock DEAD box protein A 3229 48.14 0 3365464..3366348 - 294 197249279 nlpI SeAg_B3468 - lipoprotein NlpI 3230 50.00 0 3368835..3369104 - 89 197250242 rpsO SeAg_B3471 - ribosomal protein S15 3231 55.77 0 3369255..3370199 - 314 197248473 truB SeAg_B3473 - tRNA pseudouridine synthase B 3232 53.23 0 3370199..3370600 - 133 197247816 rbfA SeAg_B3474 - ribosome-binding factor A 3233 55.43 0 3370821..3373499 - 892 197249329 infB SeAg_B3475 - translation initiation factor IF-2 3234 52.43 0 3373524..3375026 - 500 197248686 nusA SeAg_B3476 - transcription termination/antitermination factor NusA 3235 50.75 0 3375054..3375518 - 154 197248900 - SeAg_B3477 - hypothetical protein 3236 54.09 0 3376134..3377477 + 447 197248069 argG SeAg_B3479 - argininosuccinate synthase 3237 46.48 0 3377563..3378627 - 354 197250515 - SeAg_B3480 - putative cytoplasmic protein 3238 51.65 0 3379062..3379394 - 110 197250047 secG SeAg_B3482 - preprotein translocase, SecG subunit 3239 57.47 0 3379617..3380954 - 445 197251794 glmM SeAg_B3483 - phosphoglucosamine mutase 3240 54.30 0 3380947..3381795 - 282 197250305 folP SeAg_B3484 - dihydropteroate synthase 3241 55.66 0 3381899..3383842 - 647 197248059 hflB SeAg_B3485 - ATP-dependent metallopeptidase HflB 3242 51.52 0 3383937..3384563 - 208 197247415 rrmJ SeAg_B3486 - ribosomal RNA large subunit methyltransferase J 3243 47.15 0 3384651..3384983 + 110 197249374 - SeAg_B3487 - putative RNA-binding protein 3244 50.52 0 3385139..3385615 - 158 197248717 greA SeAg_B3488 - transcription elongation factor GreA 3245 51.94 0 3385669..3385797 - 42 197248948 - SeAg_B3489 - hypothetical protein 3246 54.95 0 3385863..3387296 + 477 197248961 dacB SeAg_B3490 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 3247 55.50 0 3387427..3388599 - 390 197249605 - SeAg_B3491 - GTP-binding protein Obg/CgtA 3248 52.90 0 3388615..3389580 - 321 197247798 - SeAg_B3492 - putative transporter 3249 49.22 0 3389710..3389967 - 85 197250886 rpmA SeAg_B3493 - ribosomal protein L27 3250 49.04 0 3389987..3390298 - 103 197249879 rplU SeAg_B3494 - ribosomal protein L21 3251 52.11 0 3390415..3391527 + 370 197250149 ispB SeAg_B3495 - octaprenyl-diphosphate synthase 3252 50.35 0 3391760..3392047 + 95 197250788 - SeAg_B3496 - transcriptional regulator 3253 58.17 +1 3392106..3393365 - 419 197248851 murA SeAg_B3497 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3254 51.37 0 3393419..3393673 - 84 197247651 - SeAg_B3498 - protein YrbA 3255 59.26 +1 3393861..3394157 - 98 197249208 - SeAg_B3499 - putative anti-sigma factor antagonist 3256 53.30 0 3394157..3394792 - 211 197248552 ttg2D SeAg_B3500 - toluene tolerance protein Ttg2D 3257 51.45 0 3394811..3395362 - 183 197248490 - SeAg_B3501 - Mce family protein 3258 57.85 0 3395367..3396149 - 260 197251770 - SeAg_B3502 - toluene ABC transporter, permease protein 3259 58.06 0 3396157..3396969 - 270 197251220 - SeAg_B3503 - toluene ABC transporter, ATP-binding protein 3260 55.21 0 3397182..3398159 + 325 197251062 - SeAg_B3504 - sodium/calcium exchanger protein 3261 54.91 0 3398173..3399159 + 328 197250012 kdsD SeAg_B3505 - arabinose 5-phosphate isomerase 3262 54.32 0 3399180..3399746 + 188 197249283 kdsC SeAg_B3506 - 3-deoxy-manno-octulosonate-8-phosphatase 3263 47.22 0 3399743..3400318 + 191 197248734 - SeAg_B3507 - hypothetical protein 3264 53.15 0 3400287..3400841 + 184 197248482 lptA SeAg_B3508 - lipopolysaccharide ABC transporter, periplasmic lipopolysaccharide-binding protein 3265 54.96 0 3400848..3401573 + 241 197251736 lptB SeAg_B3509 - lipopolysaccharide ABC transporter, ATP-binding protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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