version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2681 46.15 0 2815682..2816539 - 285 197247667 - SeAg_B2876 - retron EC67 DNA adenine methylase 2682 57.46 0 2816536..2816763 - 75 197251899 - SeAg_B2877 - C4-type zinc finger protein, DksA/TraR family 2683 53.42 0 2816763..2816996 - 77 197248134 - SeAg_B2878 - hypothetical protein 2684 44.74 -1 2817064..2817405 - 113 197248338 - SeAg_B2879 - hypothetical protein 2685 53.73 0 2818272..2818781 - 169 197249297 - SeAg_B2880 - phage regulatory protein 2686 45.00 -1 2818817..2819056 - 79 197248537 - SeAg_B2881 - phage regulatory protein 2687 49.22 0 2819809..2820834 + 341 197250527 - SeAg_B2882 - phage integrase 2688 55.33 0 2821164..2821745 + 193 197247818 - SeAg_B2883 - phage integrase family protein 2689 32.64 -2 2822085..2823959 + 624 197251374 - SeAg_B2884 - putative inner membrane protein 2690 56.90 0 2824849..2825964 + 371 197248468 - SeAg_B2885 - IroB 2691 58.87 +1 2826045..2829701 + 1218 197250364 - SeAg_B2886 - ATP binding cassette 2692 61.45 +1 2829811..2831055 + 414 197249762 - SeAg_B2887 - enterochelin esterase 2693 53.42 0 2831087..2832022 + 311 197249038 - SeAg_B2888 - IroE 2694 51.17 0 2832064..2834238 - 724 197250663 - SeAg_B2889 - TonB dependent outer membrane siderophore receptor protein 2695 43.18 -1 2834685..2834816 + 43 197247568 - SeAg_B2890 - hypothetical protein 2696 44.25 -1 2835265..2836317 - 350 197249533 - SeAg_B2891 - effector protein pipB2 2697 45.05 -1 2836834..2837763 + 309 197250813 - SeAg_B2892 - virulence protein 2698 41.25 -1 2838057..2838953 + 298 197248006 - SeAg_B2893 - Mig-14 2699 31.58 -2 2839468..2839581 + 37 197250664 - SeAg_B2894 - putative inner membrane protein 2700 50.59 0 2839674..2840687 - 337 197251320 hoxN SeAg_B2895 - high-affinity nickel transport protein 2701 56.50 0 2840820..2842235 - 471 197250124 - SeAg_B2896 - tricarboxylic transport: regulatory protein 2702 55.41 0 2842222..2842896 - 224 197250760 - SeAg_B2897 - DNA-binding response regulator TctD 2703 56.24 0 2843051..2844028 + 325 197248581 - SeAg_B2898 - tricarboxylic transport 2704 57.47 0 2844040..2844474 + 144 197249203 - SeAg_B2899 - tricarboxylic transport 2705 56.90 0 2844485..2845999 + 504 197248193 - SeAg_B2900 - integral membrane protein 2706 35.09 -2 2846163..2846276 + 37 197248561 - SeAg_B2901 - hypothetical protein 2707 59.26 +1 2847305..2848573 + 422 197251431 - SeAg_B2903 - putative FAD dependent oxidoreductase 2708 57.83 0 2848595..2850043 + 482 197247932 - SeAg_B2904 - succinate-semialdehyde dehydrogenase (NADP+) 2709 58.02 0 2850058..2851341 + 427 197247877 gabT SeAg_B2905 - 4-aminobutyrate transaminase 2710 51.89 0 2851471..2852871 + 466 197249468 gabP SeAg_B2906 - gaba permease 2711 56.64 0 2852913..2853590 + 225 197248962 - SeAg_B2907 - transcriptional regulator, GntR family 2712 44.22 -1 2853612..2854061 - 149 197250052 - SeAg_B2908 - peptidoglycan-binding LysM 2713 42.77 -1 2854161..2854319 - 52 197249846 - SeAg_B2909 - hypothetical protein 2714 51.67 0 2854502..2854801 + 99 197251611 - SeAg_B2910 - regulatory protein, ArsR 2715 56.25 0 2854811..2855338 + 175 197250899 - SeAg_B2911 - inner membrane protein YgaP 2716 52.22 0 2855417..2855596 + 59 197247450 - SeAg_B2912 - hypothetical protein 2717 46.52 0 2855686..2856087 - 133 197250698 - SeAg_B2913 - H-NS histone family 2718 40.35 -1 2856658..2856771 + 37 197249070 - SeAg_B2914 - hypothetical protein 2719 50.00 0 2856986..2857435 + 149 197250159 - SeAg_B2915 - membrane protein 2720 50.14 0 2857470..2857820 - 116 197250519 - SeAg_B2916 - YgaC 2721 42.74 -1 2857804..2857920 - 38 197251145 - SeAg_B2917 - hypothetical protein 2722 54.13 0 2857982..2858308 + 108 197250955 - SeAg_B2918 - putative inner membrane protein 2723 56.85 0 2858392..2859726 - 444 197247551 - SeAg_B2919 - transcriptional regulator, GntR family with aminotransferase domain 2724 51.95 0 2859812..2860246 + 144 197248182 - SeAg_B2920 - alkylhydroperoxidase AhpD family core domain protein 2725 53.46 0 2860261..2860419 + 52 197248544 - SeAg_B2921 - hypothetical protein 2726 54.88 0 2860518..2860763 + 81 197249200 - SeAg_B2922 - glutaredoxin 2727 57.42 0 2860760..2861170 + 136 197250338 nrdI SeAg_B2923 - NrdI protein 2728 54.17 0 2861143..2863287 + 714 197249723 - SeAg_B2924 - ribonucleoside-diphosphate reductase, alpha subunit 2729 49.38 0 2863298..2864257 + 319 197251114 - SeAg_B2925 - ribonucleoside-diphosphate reductase, beta subunit 2730 50.37 0 2864612..2865814 + 400 197251048 proV SeAg_B2926 - glycine betaine/L-proline ABC transporter, ATP binding protein 2731 59.34 +1 2865807..2866871 + 354 197247835 - SeAg_B2927 - glycine betaine/L-proline transport system permease protein ProW 2732 53.61 0 2866941..2867936 + 331 197251766 - SeAg_B2928 - glycine betaine-binding periplasmic protein 2733 58.99 +1 2868101..2869285 + 394 197248536 - SeAg_B2929 - major facilitator family transporter 2734 48.40 0 2869782..2870312 + 176 197248460 mprA SeAg_B2930 - transcriptional repressor MprA 2735 54.56 0 2870439..2871611 + 390 197249944 emrA SeAg_B2931 - multidrug resistance protein A 2736 56.99 0 2871628..2873166 + 512 197248872 emrB SeAg_B2932 - multidrug resistance protein B 2737 47.41 0 2873215..2874585 - 456 197249509 - SeAg_B2933 - putative glycoporin 2738 33.33 -2 2874730..2874873 + 47 197249060 - SeAg_B2934 - hypothetical protein 2739 53.29 0 2874931..2875446 - 171 197248498 luxS SeAg_B2935 - S-Ribosylhomocysteinase 2740 52.09 0 2875596..2877152 - 518 197247836 gshA SeAg_B2937 - glutamate--cysteine ligase 2741 53.52 0 2877229..2877654 - 141 197251375 - SeAg_B2938 - hypothetical protein 2742 56.44 0 2877651..2878217 - 188 197251041 - SeAg_B2939 - HAD-superfamily hydrolase, subfamily IA 2743 51.08 0 2879465..2879650 - 61 197250412 csrA SeAg_B2945 - carbon storage regulator 2744 54.88 0 2879885..2882515 - 876 197249925 alaS SeAg_B2946 - alanyl-tRNA synthetase 2745 51.90 0 2882751..2883251 - 166 197248878 recX SeAg_B2947 - regulatory protein RecX 2746 54.61 0 2883368..2884429 - 353 197250628 recA SeAg_B2948 - protein RecA 2747 59.44 +1 2884514..2885011 - 165 197249641 - SeAg_B2949 - competence/damage-inducible protein CinA domain protein 2748 44.72 -1 2885207..2885452 + 81 197249427 - SeAg_B2950 - hypothetical protein 2749 56.30 0 2885490..2886569 - 359 197249330 mltB SeAg_B2951 - lytic murein transglycosylase B 2750 50.53 0 2886823..2887386 + 187 197248668 - SeAg_B2952 - glucitol/sorbitol permease iic component 2751 58.02 0 2887383..2888354 + 323 197250325 - SeAg_B2953 - glucitol/sorbitol-specific phosphotransferase enzyme iib component 2752 58.13 +1 2888366..2888728 + 120 197251454 - SeAg_B2954 - glucitol/sorbitol-specific phosphotransferase enzyme iia component 2753 55.00 0 2888740..2889519 + 259 197251343 srlD SeAg_B2955 - sorbitol-6-phosphate 2-dehydrogenase 2754 54.44 0 2889596..2889955 + 119 197248404 - SeAg_B2956 - glucitol operon activator protein 2755 49.74 0 2890153..2890926 + 257 197247771 srlR SeAg_B2957 - glucitol operon repressor 2756 57.25 0 2890919..2891884 + 321 197251720 gutQ SeAg_B2958 - gutQ protein 2757 59.43 +1 2891881..2893401 - 506 197247680 - SeAg_B2959 - anaerobic nitric oxide reductase transcription regulator NorR 2758 53.75 0 2893587..2895026 + 479 197248489 - SeAg_B2960 - anaerobic nitric oxide reductase flavorubredoxin 2759 56.44 0 2895023..2896156 + 377 197248846 - SeAg_B2961 - nitric oxide reductase FlRd-NAD 2760 60.29 +1 2896253..2898493 - 746 197249232 hypF SeAg_B2962 - [NiFe] hydrogenase maturation protein HypF 2761 56.23 0 2898639..2899184 - 181 197250119 - SeAg_B2963 - protein AegA 2762 35.09 -2 2899153..2899266 - 37 197249795 - SeAg_B2964 - hypothetical protein 2763 53.21 0 2899385..2900194 - 269 197250291 - SeAg_B2965 - hypothetical protein 2764 56.26 0 2900219..2900689 - 156 197250999 hycI SeAg_B2966 - hydrogenase maturation peptidase HycI 2765 56.93 0 2900682..2901092 - 136 197251599 - SeAg_B2967 - formate hydrogenlyase maturation protein 2766 59.51 +1 2901089..2901856 - 255 197248973 hycG SeAg_B2968 - formate hydrogenlyase, subunit G 2767 55.43 0 2901856..2902398 - 180 197251323 hycF SeAg_B2969 - formate hydrogenlyase, subunit F 2768 57.43 0 2902408..2904117 - 569 197250744 hycE SeAg_B2970 - formate hydrogenlyase, subunit E 2769 58.77 +1 2904135..2905058 - 307 197248850 hycD SeAg_B2971 - formate hydrogenlyase, subunit D 2770 61.41 +1 2905061..2906887 - 608 197249178 hycC SeAg_B2972 - formate hydrogenlyase, subunit C 2771 57.31 0 2906887..2907495 - 202 197247841 hycB SeAg_B2973 - formate hydrogenlyase, subunit B 2772 47.37 0 2907517..2907630 - 37 197248143 - SeAg_B2974 - hypothetical protein 2773 50.87 0 2907641..2908102 - 153 197251042 - SeAg_B2975 - formate hydrogenlyase regulatory protein 2774 47.90 0 2908312..2908668 + 118 197251102 hypA SeAg_B2976 - hydrogenase nickel insertion protein HypA 2775 57.62 0 2908737..2909609 + 290 197251741 hypB SeAg_B2977 - hydrogenase isoenzymes nickel incorporation protein HypB 2776 55.31 0 2909600..2909872 + 90 197248820 hypC2 SeAg_B2978 - hydrogenase assembly chaperone HypC/HupF 2777 57.93 0 2909872..2910993 + 373 197249274 hypD SeAg_B2979 - hydrogenase expression/formation protein HypD 2778 58.95 +1 2910990..2912000 + 336 197250154 hypE SeAg_B2980 - hydrogenase expression/formation protein HypE 2779 54.83 0 2912219..2914297 + 692 197250657 - SeAg_B2981 - formate hydrogenlyase transcriptional activator 2780 54.20 0 2914359..2914703 - 114 197248726 - SeAg_B2982 - hypothetical protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0