version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2558 55.42 0 2684939..2685667 - 242 197248854 recO SeAg_B2741 - DNA repair protein RecO 2559 51.55 0 2685679..2686584 - 301 197248494 era SeAg_B2742 - GTP-binding protein Era 2560 52.44 0 2686581..2687318 - 245 197247832 rnc SeAg_B2743 - ribonuclease III 2561 53.33 0 2687535..2688509 - 324 197250975 lepB SeAg_B2745 - signal peptidase I 2562 52.94 0 2688526..2690325 - 599 197248017 lepA SeAg_B2746 - GTP-binding protein LepA 2563 58.33 +1 2690576..2691055 - 159 197249938 - SeAg_B2747 - sigma-E factor regulatory protein RseC 2564 54.86 0 2691052..2692008 - 318 197247641 rseB SeAg_B2748 - sigma-E factor regulatory protein RseB 2565 54.22 0 2692008..2692658 - 216 197251640 rseA SeAg_B2749 - sigma-E factor negative regulatory protein 2566 51.04 0 2692690..2693265 - 191 197250418 rpoE SeAg_B2750 - RNA polymerase sigma-E factor 2567 55.25 0 2693693..2695312 + 539 197249172 nadB SeAg_B2751 - L-aspartate oxidase 2568 54.46 0 2696165..2697499 + 444 197251182 - SeAg_B2753 - ATP-dependent RNA helicase SrmB 2569 52.22 0 2697517..2698416 - 299 197251837 - SeAg_B2754 - LysR substrate binding domain protein 2570 51.53 0 2698519..2699106 + 195 197250166 - SeAg_B2755 - translocator protein, LysE family 2571 50.26 0 2699168..2699551 - 127 197249719 grcA SeAg_B2756 - autonomous glycyl radical cofactor 2572 54.78 0 2699870..2700559 + 229 197248557 ung SeAg_B2757 - uracil-DNA glycosylase 2573 56.94 0 2700675..2701712 - 345 197247519 - SeAg_B2758 - RNA methyltransferase, TrmH family 2574 53.81 0 2701916..2702335 + 139 197247757 - SeAg_B2759 - putative thioredoxin 2575 54.77 0 2702408..2703088 + 226 197248147 - SeAg_B2760 - DTW domain protein 2576 56.03 0 2703142..2705802 + 886 197251689 - SeAg_B2761 - CoA binding domain/acetyltransferase domain protein 2577 49.85 0 2705917..2707272 + 451 197250075 pssA SeAg_B2762 - CDP-diacylglycerol--serine O-phosphatidyltransferase 2578 56.67 0 2707309..2707638 + 109 197249290 - SeAg_B2763 - hypothetical protein 2579 51.92 0 2707635..2708936 - 433 197247476 - SeAg_B2764 - alpha-ketoglutarate permease 2580 49.12 0 2709040..2709495 - 151 197251648 - SeAg_B2765 - putative cytoplasmic protein 2581 57.50 0 2709743..2709862 + 39 197251212 - SeAg_B2766 - hypothetical protein 2582 50.00 0 2711244..2711363 - 39 197250080 - SeAg_B2768 - hypothetical protein 2583 37.61 -2 2715433..2715549 + 38 197248400 - SeAg_B2771 - hypothetical protein 2584 53.19 0 2715551..2718124 - 857 197248685 clpB SeAg_B2772 - ATP-dependent chaperone protein ClpB 2585 54.23 0 2718254..2718985 - 243 197249378 - SeAg_B2773 - conserved hypothetical protein TIGR00726 2586 53.21 0 2718982..2719962 - 326 197247406 rluD SeAg_B2774 - ribosomal large subunit pseudouridine synthase D 2587 52.44 0 2720094..2720831 + 245 197248037 - SeAg_B2775 - outer membrane assembly lipoprotein YfiO 2588 47.20 0 2721103..2721441 + 112 197251246 - SeAg_B2776 - ribosomal subunit interface protein 2589 40.80 -1 2721812..2721985 + 57 197251840 - SeAg_B2777 - hypothetical protein 2590 35.10 -2 2722121..2723593 - 490 197250476 - SeAg_B2778 - hypothetical protein 2591 57.81 0 2724711..2726414 - 567 197250523 - SeAg_B2779 - phage protein 2592 55.49 0 2726414..2726959 - 181 197249608 - SeAg_B2780 - phage protein 2593 57.44 0 2726931..2727656 - 241 197249065 - SeAg_B2781 - hypothetical protein 2594 45.01 -1 2727646..2728176 - 176 197249027 - SeAg_B2782 - putative phage tail fiber assembly protein 2595 51.12 0 2728179..2730191 - 670 197248492 - SeAg_B2783 - phage tail fiber repeat-containing protein 2596 57.14 0 2730201..2730788 - 195 197250262 - SeAg_B2784 - phage protein 2597 55.70 0 2730781..2731965 - 394 197249802 - SeAg_B2785 - phage protein 2598 43.33 -1 2731962..2732291 - 109 197251025 - SeAg_B2786 - phage protein 2599 51.32 0 2732288..2734255 - 655 197250251 - SeAg_B2787 - phage tail tape measure protein, TP901 family, core region 2600 37.98 -2 2734443..2734700 - 85 197247764 - SeAg_B2788 - phage protein 2601 55.56 0 2734847..2735179 - 110 197251516 - SeAg_B2789 - hypothetical phage-related protein 2602 56.73 0 2735179..2735520 - 113 197248416 - SeAg_B2790 - hypothetical phage-related protein 2603 50.84 0 2735517..2735813 - 98 197250459 - SeAg_B2791 - phage holin family 2 2604 51.75 0 2735826..2736281 - 151 197249506 - SeAg_B2792 - phage protein 2605 55.67 0 2736278..2737405 - 375 197248884 - SeAg_B2793 - tail sheath 2606 55.74 0 2737402..2738106 - 234 197248437 - SeAg_B2794 - phage protein 2607 53.21 0 2738103..2738585 - 160 197247892 - SeAg_B2795 - hypothetical protein 2608 56.07 0 2738582..2739034 - 150 197249505 - SeAg_B2796 - phage head completion protein 2609 58.94 +1 2739133..2739831 - 232 197248856 - SeAg_B2797 - phage terminase subunit 2610 52.67 0 2739843..2740871 - 342 197248447 - SeAg_B2798 - phage major capsid protein, P2 family 2611 46.97 0 2740906..2741895 - 329 197247821 - SeAg_B2799 - scaffold protein 2612 52.55 0 2741953..2743737 + 594 197251462 - SeAg_B2800 - putative conserved hypothetical protein 2613 53.04 0 2743734..2744753 + 339 197250748 - SeAg_B2801 - phage portal protein, pbsx family 2614 45.56 0 2744807..2745076 + 89 197247787 - SeAg_B2802 - zinc-finger protein 2615 48.80 0 2745104..2747761 - 885 197251558 - SeAg_B2803 - putative phage-related protein 2616 37.61 -2 2747715..2747831 - 38 197247917 - SeAg_B2804 - hypothetical protein 2617 38.36 -2 2747800..2748018 - 72 197247436 - SeAg_B2805 - hypothetical protein 2618 41.58 -1 2748021..2748590 - 189 197248107 - SeAg_B2806 - endodeoxyribonuclease 2619 39.34 -1 2748600..2748932 - 110 197247543 - SeAg_B2807 - hypothetical protein 2620 41.59 -1 2748958..2749296 - 112 197251686 - SeAg_B2808 - bacteriophage regulatory protein 2621 49.17 0 2749554..2749673 - 39 197251187 - SeAg_B2809 - hypothetical protein 2622 44.91 -1 2749748..2750758 + 336 197250677 - SeAg_B2810 - integrase 2623 54.09 0 2751069..2752229 + 386 197251663 - SeAg_B2811 - P-protein 2624 54.35 0 2752190..2753098 - 302 197251526 - SeAg_B2812 - SMP-30/Gluconolaconase/LRE domain protein 2625 55.08 0 2753156..2754277 - 373 197250436 tyrA SeAg_B2813 - T-protein 2626 53.03 0 2754287..2755357 - 356 197249736 aroF SeAg_B2814 - 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive 2627 34.21 -2 2755532..2755645 - 37 197249119 - SeAg_B2815 - hypothetical protein 2628 46.44 0 2755797..2756315 + 172 197249053 - SeAg_B2816 - putative periplasmic protein 2629 50.70 0 2756308..2757528 + 406 197248314 - SeAg_B2817 - inner membrane protein YfiN 2630 48.56 0 2757685..2758032 - 115 197247677 rplS SeAg_B2818 - ribosomal protein L19 2631 53.78 0 2758073..2758840 - 255 197248318 trmD SeAg_B2819 - tRNA (guanine-N1)-methyltransferase 2632 49.82 0 2758885..2759436 - 183 197247653 rimM SeAg_B2820 - 16S rRNA processing protein RimM 2633 52.21 0 2759452..2759700 - 82 197250392 rpsP SeAg_B2821 - ribosomal protein S16 2634 48.98 0 2759757..2759903 - 48 197248573 - SeAg_B2822 - hypothetical protein 2635 54.99 0 2759953..2761314 - 453 197247718 ffh SeAg_B2823 - signal recognition particle protein 2636 52.82 0 2762336..2763577 + 413 197251010 - SeAg_B2825 - CBS/transporter associated domain protein 2637 43.40 -1 2763698..2764303 + 201 197251643 - SeAg_B2826 - hypothetical protein 2638 50.55 0 2764338..2765063 - 241 197250981 grpE SeAg_B2828 - co-chaperone GrpE 2639 50.97 0 2765052..2765930 + 292 197251609 ppnK SeAg_B2827 - NAD(+) kinase 2640 54.63 0 2766016..2767677 + 553 197249669 recN SeAg_B2829 - DNA repair protein RecN 2641 51.33 0 2767826..2768164 + 112 197250284 - SeAg_B2830 - small protein A 2642 54.30 0 2768330..2768620 - 96 197247785 - SeAg_B2831 - protein YfjF 2643 49.48 0 2768610..2769086 - 158 197248003 - SeAg_B2832 - polyketide cyclase/dehydrase family protein 2644 49.28 0 2769236..2769718 + 160 197248802 smpB SeAg_B2833 - SsrA-binding protein 2645 18.95 -2 2769865..2770017 - 50 197249286 - SeAg_B2834 - hypothetical protein 2646 58.54 +1 2770333..2781807 + 3824 197250420 - SeAg_B2835 - VCBS repeat-containing protein 2647 56.63 0 2783278..2785458 + 726 197251129 - SeAg_B2837 - protein secretion ABC efflux system, permease and ATP-binding protein 2648 53.99 0 2785439..2786629 + 396 197251864 - SeAg_B2838 - type I secretion membrane fusion protein, HlyD family 2649 50.69 0 2787111..2787254 + 47 197249418 - SeAg_B2841 - hypothetical protein 2650 54.04 0 2787468..2788568 - 366 197250221 - SeAg_B2842 - phage late control D family protein 2651 53.09 0 2788565..2789050 - 161 197250142 - SeAg_B2843 - phage P2 GpU family protein 2652 58.08 0 2789047..2791854 - 935 197249129 - SeAg_B2844 - phage tail tape measure protein 2653 56.44 0 2791981..2792283 - 100 197250377 - SeAg_B2846 - phage tail protein E 2654 55.81 0 2792338..2792853 - 171 197250833 - SeAg_B2847 - phage major tail tube protein FII 2655 57.97 0 2792863..2794035 - 390 197247697 - SeAg_B2848 - major tail sheath protein 2656 40.91 -1 2794166..2794693 - 175 197248312 - SeAg_B2849 - putative phage tail fiber assembly protein 2657 51.56 0 2794696..2796462 - 588 197248971 - SeAg_B2850 - tail fiber domain protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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