version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2517 50.31 0 2641189..2641512 - 107 197247724 iscA SeAg_B2696 - iron-sulfur cluster assembly protein IscA 2518 50.65 0 2641541..2641927 - 128 197248479 iscU SeAg_B2697 - FeS cluster assembly scaffold IscU 2519 55.39 0 2641955..2643169 - 404 197250872 iscS SeAg_B2698 - cysteine desulfurase IscS 2520 55.35 0 2643350..2643844 - 164 197251434 iscR SeAg_B2699 - iron-sulfur cluster assembly transcription factor IscR 2521 57.10 0 2644004..2644735 - 243 197249941 - SeAg_B2700 - RNA methyltransferase 2522 55.22 0 2644854..2645657 + 267 197250435 suhB SeAg_B2701 - inositol-1-monophosphatase 2523 52.22 0 2645802..2646680 + 292 197249552 - SeAg_B2702 - hypothetical protein 2524 53.07 0 2646862..2647905 + 347 197250029 asrA SeAg_B2703 - sulfite reductase, subunit A 2525 55.56 0 2647909..2648727 + 272 197250237 asrB SeAg_B2704 - sulfite reductase, subunit B 2526 55.42 0 2648738..2649751 + 337 197249765 asrC SeAg_B2705 - sulfite reductase, subunit C 2527 58.36 +1 2649752..2650738 - 328 197248950 - SeAg_B2706 - high-affinity nickel-transporter 2528 52.43 0 2650729..2651367 - 212 197249445 - SeAg_B2707 - hypothetical protein 2529 54.93 0 2651493..2652770 + 425 197248394 - SeAg_B2708 - stationary phase-inducible protein CsiE 2530 57.89 0 2652765..2653904 - 379 197247902 - SeAg_B2709 - probable 3-phenylpropionic acid transporter 2531 57.02 0 2654100..2655353 - 417 197250880 glyA SeAg_B2710 - serine hydroxymethyltransferase 2532 36.73 -2 2655491..2655637 - 48 197251425 - SeAg_B2711 - hypothetical protein 2533 56.17 0 2655678..2656868 + 396 197249875 hmp SeAg_B2712 - flavohemoprotein 2534 49.83 0 2657050..2658237 + 395 197249217 - SeAg_B2713 - transcriptional activator CadC 2535 44.75 -1 2658206..2659414 - 402 197250443 - SeAg_B2715 - IS10 transposase 2536 41.04 -1 2659528..2659929 + 133 197247388 - SeAg_B2716 - transcriptional activator CadC 2537 53.68 0 2660290..2661621 + 443 197249344 - SeAg_B2717 - lysine/cadaverine transport protein 2538 49.65 0 2661704..2663848 + 714 197247531 - SeAg_B2718 - lysine decarboxylase, constitutive 2539 56.40 0 2663904..2665364 + 486 197251175 - SeAg_B2719 - inner membrane transporter YbgH 2540 49.85 0 2665413..2665751 - 112 197251647 - SeAg_B2720 - nitrogen regulatory protein P-II 2541 55.31 0 2665828..2667165 - 445 197250180 - SeAg_B2721 - sigma-54 dependent transcriptional regulator/response regulator 2542 59.53 +1 2667162..2667848 - 228 197250667 - SeAg_B2722 - hypothetical protein 2543 37.21 -2 2669621..2669749 + 42 197249153 - SeAg_B2726 - hypothetical protein 2544 59.23 +1 2670008..2673895 - 1295 197251301 purL SeAg_B2727 - phosphoribosylformylglycinamidine synthase 2545 44.93 -1 2674009..2674146 + 45 197249862 - SeAg_B2728 - hypothetical protein 2546 52.10 0 2674151..2675695 + 514 197247711 - SeAg_B2729 - lytic transglycosylase, catalytic 2547 57.23 0 2675746..2676264 - 172 197248207 - SeAg_B2730 - tRNA-specific adenosine deaminase 2548 54.25 0 2676322..2676957 - 211 197249046 yfhB SeAg_B2731 - HAD superfamily (subfamily IF) hydrolase, YfhB 2549 56.17 0 2676961..2678322 - 453 197249565 - SeAg_B2732 - phosphotransferase system, eiic 2550 57.27 0 2678333..2679226 - 297 197248565 murQ SeAg_B2733 - N-acetylmuramic acid 6-phosphate etherase 2551 56.77 0 2679342..2680190 + 282 197249281 - SeAg_B2734 - transcriptional regulator, RpiR family protein 2552 48.58 0 2680229..2681146 - 305 197250042 panE SeAg_B2735 - 2-dehydropantoate 2-reductase 2553 46.03 0 2681168..2682364 - 398 197250564 - SeAg_B2736 - major facilitator family transporter 2554 42.93 -1 2682480..2683406 + 308 197249315 - SeAg_B2737 - putative transcriptional regulator 2555 47.51 0 2683444..2683704 + 86 197250458 - SeAg_B2738 - ferredoxin 2556 56.96 0 2683816..2684196 - 126 197249822 acpS SeAg_B2739 - holo-(acyl-carrier-protein) synthase 2557 57.51 0 2684196..2684927 - 243 197249528 pdxJ SeAg_B2740 - pyridoxine 5'-phosphate synthase 2558 55.42 0 2684939..2685667 - 242 197248854 recO SeAg_B2741 - DNA repair protein RecO 2559 51.55 0 2685679..2686584 - 301 197248494 era SeAg_B2742 - GTP-binding protein Era 2560 52.44 0 2686581..2687318 - 245 197247832 rnc SeAg_B2743 - ribonuclease III 2561 53.33 0 2687535..2688509 - 324 197250975 lepB SeAg_B2745 - signal peptidase I 2562 52.94 0 2688526..2690325 - 599 197248017 lepA SeAg_B2746 - GTP-binding protein LepA 2563 58.33 +1 2690576..2691055 - 159 197249938 - SeAg_B2747 - sigma-E factor regulatory protein RseC 2564 54.86 0 2691052..2692008 - 318 197247641 rseB SeAg_B2748 - sigma-E factor regulatory protein RseB 2565 54.22 0 2692008..2692658 - 216 197251640 rseA SeAg_B2749 - sigma-E factor negative regulatory protein 2566 51.04 0 2692690..2693265 - 191 197250418 rpoE SeAg_B2750 - RNA polymerase sigma-E factor 2567 55.25 0 2693693..2695312 + 539 197249172 nadB SeAg_B2751 - L-aspartate oxidase 2568 54.46 0 2696165..2697499 + 444 197251182 - SeAg_B2753 - ATP-dependent RNA helicase SrmB 2569 52.22 0 2697517..2698416 - 299 197251837 - SeAg_B2754 - LysR substrate binding domain protein 2570 51.53 0 2698519..2699106 + 195 197250166 - SeAg_B2755 - translocator protein, LysE family 2571 50.26 0 2699168..2699551 - 127 197249719 grcA SeAg_B2756 - autonomous glycyl radical cofactor 2572 54.78 0 2699870..2700559 + 229 197248557 ung SeAg_B2757 - uracil-DNA glycosylase 2573 56.94 0 2700675..2701712 - 345 197247519 - SeAg_B2758 - RNA methyltransferase, TrmH family 2574 53.81 0 2701916..2702335 + 139 197247757 - SeAg_B2759 - putative thioredoxin 2575 54.77 0 2702408..2703088 + 226 197248147 - SeAg_B2760 - DTW domain protein 2576 56.03 0 2703142..2705802 + 886 197251689 - SeAg_B2761 - CoA binding domain/acetyltransferase domain protein 2577 49.85 0 2705917..2707272 + 451 197250075 pssA SeAg_B2762 - CDP-diacylglycerol--serine O-phosphatidyltransferase 2578 56.67 0 2707309..2707638 + 109 197249290 - SeAg_B2763 - hypothetical protein 2579 51.92 0 2707635..2708936 - 433 197247476 - SeAg_B2764 - alpha-ketoglutarate permease 2580 49.12 0 2709040..2709495 - 151 197251648 - SeAg_B2765 - putative cytoplasmic protein 2581 57.50 0 2709743..2709862 + 39 197251212 - SeAg_B2766 - hypothetical protein 2582 50.00 0 2711244..2711363 - 39 197250080 - SeAg_B2768 - hypothetical protein 2583 37.61 -2 2715433..2715549 + 38 197248400 - SeAg_B2771 - hypothetical protein 2584 53.19 0 2715551..2718124 - 857 197248685 clpB SeAg_B2772 - ATP-dependent chaperone protein ClpB 2585 54.23 0 2718254..2718985 - 243 197249378 - SeAg_B2773 - conserved hypothetical protein TIGR00726 2586 53.21 0 2718982..2719962 - 326 197247406 rluD SeAg_B2774 - ribosomal large subunit pseudouridine synthase D 2587 52.44 0 2720094..2720831 + 245 197248037 - SeAg_B2775 - outer membrane assembly lipoprotein YfiO 2588 47.20 0 2721103..2721441 + 112 197251246 - SeAg_B2776 - ribosomal subunit interface protein 2589 40.80 -1 2721812..2721985 + 57 197251840 - SeAg_B2777 - hypothetical protein 2590 35.10 -2 2722121..2723593 - 490 197250476 - SeAg_B2778 - hypothetical protein 2591 57.81 0 2724711..2726414 - 567 197250523 - SeAg_B2779 - phage protein 2592 55.49 0 2726414..2726959 - 181 197249608 - SeAg_B2780 - phage protein 2593 57.44 0 2726931..2727656 - 241 197249065 - SeAg_B2781 - hypothetical protein 2594 45.01 -1 2727646..2728176 - 176 197249027 - SeAg_B2782 - putative phage tail fiber assembly protein 2595 51.12 0 2728179..2730191 - 670 197248492 - SeAg_B2783 - phage tail fiber repeat-containing protein 2596 57.14 0 2730201..2730788 - 195 197250262 - SeAg_B2784 - phage protein 2597 55.70 0 2730781..2731965 - 394 197249802 - SeAg_B2785 - phage protein 2598 43.33 -1 2731962..2732291 - 109 197251025 - SeAg_B2786 - phage protein 2599 51.32 0 2732288..2734255 - 655 197250251 - SeAg_B2787 - phage tail tape measure protein, TP901 family, core region 2600 37.98 -2 2734443..2734700 - 85 197247764 - SeAg_B2788 - phage protein 2601 55.56 0 2734847..2735179 - 110 197251516 - SeAg_B2789 - hypothetical phage-related protein 2602 56.73 0 2735179..2735520 - 113 197248416 - SeAg_B2790 - hypothetical phage-related protein 2603 50.84 0 2735517..2735813 - 98 197250459 - SeAg_B2791 - phage holin family 2 2604 51.75 0 2735826..2736281 - 151 197249506 - SeAg_B2792 - phage protein 2605 55.67 0 2736278..2737405 - 375 197248884 - SeAg_B2793 - tail sheath 2606 55.74 0 2737402..2738106 - 234 197248437 - SeAg_B2794 - phage protein 2607 53.21 0 2738103..2738585 - 160 197247892 - SeAg_B2795 - hypothetical protein 2608 56.07 0 2738582..2739034 - 150 197249505 - SeAg_B2796 - phage head completion protein 2609 58.94 +1 2739133..2739831 - 232 197248856 - SeAg_B2797 - phage terminase subunit 2610 52.67 0 2739843..2740871 - 342 197248447 - SeAg_B2798 - phage major capsid protein, P2 family 2611 46.97 0 2740906..2741895 - 329 197247821 - SeAg_B2799 - scaffold protein 2612 52.55 0 2741953..2743737 + 594 197251462 - SeAg_B2800 - putative conserved hypothetical protein 2613 53.04 0 2743734..2744753 + 339 197250748 - SeAg_B2801 - phage portal protein, pbsx family 2614 45.56 0 2744807..2745076 + 89 197247787 - SeAg_B2802 - zinc-finger protein 2615 48.80 0 2745104..2747761 - 885 197251558 - SeAg_B2803 - putative phage-related protein 2616 37.61 -2 2747715..2747831 - 38 197247917 - SeAg_B2804 - hypothetical protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0