version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2470 53.99 0 2573908..2574633 - 241 197250088 hda SeAg_B2643 - DnaA regulatory inactivator Hda 2471 55.89 0 2574704..2575993 - 429 197249204 uraA SeAg_B2644 - uracil permease 2472 53.27 0 2576081..2576707 - 208 197248587 upp SeAg_B2645 - uracil phosphoribosyltransferase 2473 45.83 0 2576942..2577085 + 47 197247638 - SeAg_B2646 - hypothetical protein 2474 55.75 0 2577106..2578158 + 350 197247577 purM SeAg_B2647 - phosphoribosylformylglycinamidine cyclo-ligase 2475 56.18 0 2578158..2578796 + 212 197251232 purN SeAg_B2648 - phosphoribosylglycinamide formyltransferase 2476 49.35 0 2578985..2581051 + 688 197248327 ppk SeAg_B2649 - polyphosphate kinase 2477 53.89 0 2581017..2582597 + 526 197249697 - SeAg_B2650 - exopolyphosphatase 2478 47.74 0 2582633..2584846 - 737 197251481 - SeAg_B2651 - inner membrane protein YfgF 2479 23.19 -2 2584943..2585080 - 45 197251756 - SeAg_B2652 - putative cytoplasmic protein 2480 47.40 0 2585259..2585450 + 63 197250139 - SeAg_B2653 - putative inner membrane protein 2481 48.59 0 2586486..2586839 - 117 197251118 - SeAg_B2654 - putative transposase B 2482 49.98 0 2587248..2589626 - 792 197251762 - SeAg_B2655 - SEC-C motif domain protein 2483 30.70 -2 2589955..2590068 + 37 197249184 - SeAg_B2656 - hypothetical protein 2484 56.02 0 2590289..2591866 - 525 197247502 guaA SeAg_B2659 - GMP synthetase 2485 57.87 0 2591936..2593402 - 488 197250105 guaB SeAg_B2660 - inosine-5'-monophosphate dehydrogenase 2486 58.07 0 2593563..2594912 + 449 197250739 xseA SeAg_B2661 - exodeoxyribonuclease VII, large subunit 2487 57.27 0 2595074..2601247 - 2057 197249704 - SeAg_B2662 - ShdA 2488 26.36 -2 2601263..2601391 - 42 197250323 - SeAg_B2663 - hypothetical protein 2489 58.04 0 2602283..2607868 - 1861 197251771 - SeAg_B2665 - RatB 2490 53.60 0 2608006..2608977 - 323 197250167 - SeAg_B2667 - hypothetical protein 2491 47.97 0 2608932..2609054 + 40 197249225 - SeAg_B2666 - hypothetical protein 2492 52.07 0 2609035..2611227 - 730 197250817 - SeAg_B2668 - Aec1 2493 48.20 0 2611562..2611783 - 73 197249804 - SeAg_B2669 - hypothetical protein 2494 54.88 0 2613461..2614639 - 392 197248832 - SeAg_B2671 - outer membrane assembly lipoprotein YfgL 2495 53.46 0 2614650..2615270 - 206 197251319 - SeAg_B2672 - hypothetical protein 2496 56.16 0 2615284..2616558 - 424 197251796 hisS SeAg_B2673 - histidyl-tRNA synthetase 2497 55.14 0 2616669..2617787 - 372 197250399 ispG SeAg_B2675 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2498 58.21 +1 2617814..2618818 - 334 197249977 - SeAg_B2676 - helix-turn-helix domain protein 2499 52.01 0 2619110..2620276 - 388 197249479 - SeAg_B2677 - radical SAM enzyme, Cfr family 2500 56.02 0 2620483..2620914 - 143 197248974 ndk SeAg_B2678 - nucleoside diphosphate kinase 2501 59.61 +1 2621035..2621898 - 287 197248415 - SeAg_B2679 - putative polyferredoxin 2502 59.88 +1 2621898..2622707 - 269 197247881 - SeAg_B2680 - putative anaerobic reductase component 2503 55.08 0 2622700..2623329 - 209 197250854 dmsB SeAg_B2681 - dimethylsulfoxide reductase, chain B 2504 54.85 0 2623326..2625704 - 792 197248067 - SeAg_B2682 - anaerobic dimethyl sulfoxide reductase chain a 2505 61.05 +1 2625860..2628175 - 771 197247973 pbpC SeAg_B2683 - penicillin-binding protein 1C 2506 58.45 +1 2628176..2633116 - 1646 197247492 - SeAg_B2684 - YfhM 2507 59.67 +1 2633325..2634167 + 280 197247957 - SeAg_B2685 - hypothetical protein 2508 43.11 -1 2634147..2634371 - 74 197251894 - SeAg_B2686 - hypothetical protein 2509 44.69 -1 2634413..2635081 + 222 197250614 - SeAg_B2687 - putative cytoplasmic protein 2510 47.73 0 2635136..2635267 - 43 197250055 - SeAg_B2688 - hypothetical protein 2511 55.08 0 2635650..2636426 - 258 197249437 sseB SeAg_B2690 - SseB protein 2512 56.70 0 2636536..2637819 - 427 197249892 - SeAg_B2691 - peptidase B 2513 49.25 0 2638066..2638266 - 66 197248422 iscX SeAg_B2692 - FeS assembly protein IscX 2514 52.98 0 2638278..2638613 - 111 197248941 fdx SeAg_B2693 - ferredoxin, 2Fe-2S type, ISC system 2515 59.37 +1 2638615..2640465 - 616 197248194 hscA SeAg_B2694 - Fe-S protein assembly chaperone HscA 2516 54.46 0 2640478..2640993 - 171 197249464 hscB SeAg_B2695 - Fe-S protein assembly co-chaperone HscB 2517 50.31 0 2641189..2641512 - 107 197247724 iscA SeAg_B2696 - iron-sulfur cluster assembly protein IscA 2518 50.65 0 2641541..2641927 - 128 197248479 iscU SeAg_B2697 - FeS cluster assembly scaffold IscU 2519 55.39 0 2641955..2643169 - 404 197250872 iscS SeAg_B2698 - cysteine desulfurase IscS 2520 55.35 0 2643350..2643844 - 164 197251434 iscR SeAg_B2699 - iron-sulfur cluster assembly transcription factor IscR 2521 57.10 0 2644004..2644735 - 243 197249941 - SeAg_B2700 - RNA methyltransferase 2522 55.22 0 2644854..2645657 + 267 197250435 suhB SeAg_B2701 - inositol-1-monophosphatase 2523 52.22 0 2645802..2646680 + 292 197249552 - SeAg_B2702 - hypothetical protein 2524 53.07 0 2646862..2647905 + 347 197250029 asrA SeAg_B2703 - sulfite reductase, subunit A 2525 55.56 0 2647909..2648727 + 272 197250237 asrB SeAg_B2704 - sulfite reductase, subunit B 2526 55.42 0 2648738..2649751 + 337 197249765 asrC SeAg_B2705 - sulfite reductase, subunit C 2527 58.36 +1 2649752..2650738 - 328 197248950 - SeAg_B2706 - high-affinity nickel-transporter 2528 52.43 0 2650729..2651367 - 212 197249445 - SeAg_B2707 - hypothetical protein 2529 54.93 0 2651493..2652770 + 425 197248394 - SeAg_B2708 - stationary phase-inducible protein CsiE 2530 57.89 0 2652765..2653904 - 379 197247902 - SeAg_B2709 - probable 3-phenylpropionic acid transporter 2531 57.02 0 2654100..2655353 - 417 197250880 glyA SeAg_B2710 - serine hydroxymethyltransferase 2532 36.73 -2 2655491..2655637 - 48 197251425 - SeAg_B2711 - hypothetical protein 2533 56.17 0 2655678..2656868 + 396 197249875 hmp SeAg_B2712 - flavohemoprotein 2534 49.83 0 2657050..2658237 + 395 197249217 - SeAg_B2713 - transcriptional activator CadC 2535 44.75 -1 2658206..2659414 - 402 197250443 - SeAg_B2715 - IS10 transposase 2536 41.04 -1 2659528..2659929 + 133 197247388 - SeAg_B2716 - transcriptional activator CadC 2537 53.68 0 2660290..2661621 + 443 197249344 - SeAg_B2717 - lysine/cadaverine transport protein 2538 49.65 0 2661704..2663848 + 714 197247531 - SeAg_B2718 - lysine decarboxylase, constitutive 2539 56.40 0 2663904..2665364 + 486 197251175 - SeAg_B2719 - inner membrane transporter YbgH 2540 49.85 0 2665413..2665751 - 112 197251647 - SeAg_B2720 - nitrogen regulatory protein P-II 2541 55.31 0 2665828..2667165 - 445 197250180 - SeAg_B2721 - sigma-54 dependent transcriptional regulator/response regulator 2542 59.53 +1 2667162..2667848 - 228 197250667 - SeAg_B2722 - hypothetical protein 2543 37.21 -2 2669621..2669749 + 42 197249153 - SeAg_B2726 - hypothetical protein 2544 59.23 +1 2670008..2673895 - 1295 197251301 purL SeAg_B2727 - phosphoribosylformylglycinamidine synthase 2545 44.93 -1 2674009..2674146 + 45 197249862 - SeAg_B2728 - hypothetical protein 2546 52.10 0 2674151..2675695 + 514 197247711 - SeAg_B2729 - lytic transglycosylase, catalytic 2547 57.23 0 2675746..2676264 - 172 197248207 - SeAg_B2730 - tRNA-specific adenosine deaminase 2548 54.25 0 2676322..2676957 - 211 197249046 yfhB SeAg_B2731 - HAD superfamily (subfamily IF) hydrolase, YfhB 2549 56.17 0 2676961..2678322 - 453 197249565 - SeAg_B2732 - phosphotransferase system, eiic 2550 57.27 0 2678333..2679226 - 297 197248565 murQ SeAg_B2733 - N-acetylmuramic acid 6-phosphate etherase 2551 56.77 0 2679342..2680190 + 282 197249281 - SeAg_B2734 - transcriptional regulator, RpiR family protein 2552 48.58 0 2680229..2681146 - 305 197250042 panE SeAg_B2735 - 2-dehydropantoate 2-reductase 2553 46.03 0 2681168..2682364 - 398 197250564 - SeAg_B2736 - major facilitator family transporter 2554 42.93 -1 2682480..2683406 + 308 197249315 - SeAg_B2737 - putative transcriptional regulator 2555 47.51 0 2683444..2683704 + 86 197250458 - SeAg_B2738 - ferredoxin 2556 56.96 0 2683816..2684196 - 126 197249822 acpS SeAg_B2739 - holo-(acyl-carrier-protein) synthase 2557 57.51 0 2684196..2684927 - 243 197249528 pdxJ SeAg_B2740 - pyridoxine 5'-phosphate synthase 2558 55.42 0 2684939..2685667 - 242 197248854 recO SeAg_B2741 - DNA repair protein RecO 2559 51.55 0 2685679..2686584 - 301 197248494 era SeAg_B2742 - GTP-binding protein Era 2560 52.44 0 2686581..2687318 - 245 197247832 rnc SeAg_B2743 - ribonuclease III 2561 53.33 0 2687535..2688509 - 324 197250975 lepB SeAg_B2745 - signal peptidase I 2562 52.94 0 2688526..2690325 - 599 197248017 lepA SeAg_B2746 - GTP-binding protein LepA 2563 58.33 +1 2690576..2691055 - 159 197249938 - SeAg_B2747 - sigma-E factor regulatory protein RseC 2564 54.86 0 2691052..2692008 - 318 197247641 rseB SeAg_B2748 - sigma-E factor regulatory protein RseB 2565 54.22 0 2692008..2692658 - 216 197251640 rseA SeAg_B2749 - sigma-E factor negative regulatory protein 2566 51.04 0 2692690..2693265 - 191 197250418 rpoE SeAg_B2750 - RNA polymerase sigma-E factor 2567 55.25 0 2693693..2695312 + 539 197249172 nadB SeAg_B2751 - L-aspartate oxidase 2568 54.46 0 2696165..2697499 + 444 197251182 - SeAg_B2753 - ATP-dependent RNA helicase SrmB 2569 52.22 0 2697517..2698416 - 299 197251837 - SeAg_B2754 - LysR substrate binding domain protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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